FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 93/212 (43.87%), Postives = 128/212 (60.38%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            IN+MK  I+ SD V TVS  YA E +     G  LD +IR+   K  GI NG+D   WNP TDKY+   Y    + D K   K+ALQ   GL  ++N+PV   + RL E KG +++   +  F+  E+VQ+++LGTG    E+  +  E  +P+K +    +N   +H I AGADF+++PS FEPCG+ QL AMRYGT+P+V  TGGL DTV
Sbjct:  197 INFMKGAIVFSDRVTTVSKTYADE-IKYSFFGEGLDGVIRQYHYKISGITNGIDTTIWNPETDKYLFKNYSLKNIKD-KDENKKALQRMYGLE-EKNVPVFAMVTRLVENKGLELVRYIMDEFLTTEDVQVVILGTGDYSYEEMFKYYEWKFPDKLKANIYYNNEESHKIYAGADFLMMPSIFEPCGISQLIAMRYGTIPVVRETGGLRDTV 405          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_AERHH (Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39
Identity = 81/212 (38.21%), Postives = 132/212 (62.26%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDK-GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +N +K G+L +D +  VSP+YA EL++     G+      R   ++GI+NG D Q+W+P  D ++   YD   +   K + K++LQ E GLPV  ++P+ G + RL EQKG  +L   +  F+   VQ++++G+G   +  QL+ L   +P++   +  ++  LAH++ AGADF L+PS FEPCGL Q++++ YGT+P+V + GGL DTV +
Sbjct:  206 VNLLKCGVLYADKINAVSPNYASELLTHLGAHGMASIFQQRAADLRGILNGCDYQDWDPAFDDFLPATYDVDNLA-GKHICKQSLQQETGLPVV-DLPIYGMVCRLTEQKGVHLLLPVLDKFLHHKVQVVIVGSGDPSLAAQLQTLAQQFPDRLAFINTYDDRLAHLVEAGADFFLMPSLFEPCGLNQMYSLAYGTLPLVRAVGGLKDTVVD 415          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.276e-38
Identity = 88/213 (41.31%), Postives = 131/213 (61.50%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            I +MK+G+  SD + TVSP YA E + G   G+ LD ++R+    + GI+NG+D + WNP TDK I   YD   +  A+    ++++    L +D +  ++G I RL  QKG D+L  A+P  + E +Q+ +LG G   +E++ +     YP +   +  ++  LAH+I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +
Sbjct:  200 IGYMKSGLQLSDRITTVSPAYALE-IQGPQAGMGLDGLLRQRAAQLTGILNGIDDKVWNPATDKRITATYDLDHLA-ARRANTQSVRELFDLSLDPDRLLLGVISRLSWQKGLDLLLEALPVLLAEGIQLALLGAGDPELEERFKSAAQAYPGQIGVMIGYDEDLAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLSDTVVD 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_EXISA (Glycogen synthase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.276e-38
Identity = 89/211 (42.18%), Postives = 127/211 (60.19%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MKAGI+ SD + TVSP Y  E++     G  LD  +R     ++GI+NG+D+   +P TD+ I   Y+  T  + K + K ALQ  +GL V  ++ +IGF+ RL +QKG D++        +   Q   LG+G+   E  + ++   +P K      F+I LAH+I AG+D  L+PSRFEPCGL QL +MRYGT+PIV  TGGL DTV
Sbjct:  199 VNYMKAGIVHSDQITTVSPSYRDEIMEPY-YGEGLDGALRYRAVDVRGILNGIDLATNDPNTDQRIAETYNLDTYKEGKVVNKRALQERLGLEVRDDVMLIGFVSRLVDQKGLDLINGVREELGQLPCQFAFLGSGQPEYEGIVHEMTAAHPGKVGSYIGFDIELAHLIYAGSDAFLMPSRFEPCGLSQLISMRYGTLPIVRETGGLRDTV 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_TREDE (Glycogen synthase OS=Treponema denticola GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 92/217 (42.40%), Postives = 134/217 (61.75%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL-----AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +IN++KA ++ SDM+ TVSP YA+E+   E  G  +D I+R  +  + GI+NG+D   WNP  D+YI  +Y++ T ++ K   K  LQ   GL +D ++PV G I RL +QKG   L      +A        +Q++VLG+G+   EK+L  L    P   R    +N  L+H+I AG+DF L+PSR+EPCGL Q++++ YGT+PIV  TGGL DTV
Sbjct:  201 RINFLKAALVSSDMLTTVSPSYAEEIKRPEF-GFRMDGILRYREKELTGILNGVDTSIWNPSKDEYIPYRYNSKT-LEEKEKNKSVLQERFGLEIDISVPVFGMISRLVDQKGISELFGPMYGSAFKICSDIKLQMVVLGSGESWCEKELNFLSQRLPN-FRCYIGYNEELSHLIEAGSDFFLMPSRYEPCGLNQMYSLLYGTLPIVRKTGGLADTV 414          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOFD (Glycogen synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 87/214 (40.65%), Postives = 124/214 (57.94%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            K+++MKA +  +D + TVSP YA+E +S E +G  LD ++R+    + GI+NG+D   WNP TD  +   YD    +  K L K ALQ + GL    N  V G + RL EQKG  +L   +   ++   Q+ +LG G   +E+      I YP +      ++   AH +IAGAD IL+PS FEPCGL QL+ +RYGT+P+V   GGL DTV +
Sbjct:  209 KVSFMKAALRYADRITTVSPTYARE-ISSEAQGCGLDGLLRERANSLSGILNGVDDLIWNPATDALLPAPYDEHK-LQGKTLAKRALQTKFGLEPRANALVFGAVSRLTEQKGLHLLPQVLADMVQRGGQLALLGQGDVALERAFVDAAIRYPGQVGVRIGYDEVTAHAVIAGADVILVPSEFEPCGLTQLYGLRYGTLPLVRRVGGLADTVVD 420          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_OPITP (Glycogen synthase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 88/214 (41.12%), Postives = 133/214 (62.15%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +IN+MKAGIL +D V TVSP YA+E+ + E  G  LD ++  R++ + G++NG+D + WNP TD  +  +Y  + +   K + +  L    G   D + PV G + RL EQKG D++ A    F+ ++ ++IVLG G+   E  ++ L    P K    AK +  ++H+I AG+DF L+PS FEPCGL Q+++  YGT+PIV+  GGLVDTV +
Sbjct:  203 QINFMKAGILFADRVTTVSPRYAEEIQTPEF-GCGLDGVVQTRESDLVGLLNGVDTKVWNPATDPLLPARYSRADLA-GKRVCRAELLKRFGFAPDFDGPVFGMVCRLAEQKGVDLVLANQGFFLSQSCRLIVLGAGELRYETAMKALAARAPNKIALSAKLDEAMSHLIEAGSDFFLMPSLFEPCGLNQMYSQIYGTLPIVSRVGGLVDTVID 414          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_FRAP2 (Glycogen synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 92/236 (38.98%), Postives = 131/236 (55.51%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEG---------FTGFQMGSFSVD 694
            ++++MKAG+  +D + TVSP YA+E+ S E +G  L+ ++  R   + G++NG+D Q WNP  D  I   Y  +T    K   K ALQA  GL    +  V G + RL EQKG ++L  AI        Q+++LG+G K +E+         P+       ++   AH IIAG+D IL+PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+
Sbjct:  203 QVSFMKAGLYFADKITTVSPTYAKEIQSYE-QGCGLEGLLADRHNDLYGVLNGVDPQVWNPKKDTLIEANYSVTTANVGKAKCKTALQAMTGLAKKEDAVVFGIVTRLTEQKGLNLLIEAIGEITSRGGQVVLLGSGDKALEEAFLAAAKKSPKSIAVQIGYDEEQAHRIIAGSDVILVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE 437          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_DESVM (Glycogen synthase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 95/227 (41.85%), Postives = 131/227 (57.71%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGL-PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----AEGFTGFQMG 679
            N +KAGI  +DMV TVSP YA+E++ G   G  L+ I  +R+  + GI+NG D   WNP  DK++  +Y  D       K   K AL  E+GL P   + PV+GFIGRL  QKG D+L   +P  ++ NV +I+LG G    E +   L   Y  +   +  +   LAH I AG+D  L+PSR+EPCGL Q++A+RYGT P+  + GGL DT+    +   TGF  G
Sbjct:  205 NLLKAGIAYADMVTTVSPSYAREIL-GPAYGCGLEGILQVRQHALHGILNGADYGIWNPAQDKFLPCRYGPDDPQGFAGKQRCKAALLDELGLAPELAHRPVLGFIGRLRGQKGIDLLLDIVPRLMERNVGVIILGEGNLAHEARALDLMETYRGRLCAIVGYTEDLAHRIQAGSDIFLMPSRYEPCGLTQMYALRYGTPPVATAVGGLRDTIVPWPSPEATGFTFG 430          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_AERS4 (Glycogen synthase OS=Aeromonas salmonicida (strain A449) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 83/214 (38.79%), Postives = 132/214 (61.68%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVE-LDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +N +K G+L +D +  VSP+YA EL++    G   + NI   R   ++GI+NG D ++W+P  D ++   YD   +   K + K+ LQ E GLPV  ++P+ G + RL EQKG  +L   +  F+   VQ++++G+G   +  QL+     YP+K   +  ++  LAH++ AGADF L+PS FEPCGL Q++++ YGT+P+V + GGL DTV +
Sbjct:  206 VNLLKCGVLYADKINAVSPNYASELLT--HLGAHGMANIFQQRAADLRGILNGCDYKDWDPAFDDFLPATYDVDNLA-GKRVCKQTLQQEAGLPVT-DLPIYGMVCRLTEQKGVHLLLPVLDKFLHHKVQVVIVGSGDPSLAAQLQATAQRYPDKLAFLNTYDDRLAHLVEAGADFFLMPSLFEPCGLNQMYSLAYGTLPLVRAVGGLKDTVVD 415          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_FINM29.773e-3943.87Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_AERHH9.773e-3938.21Glycogen synthase OS=Aeromonas hydrophila subsp. h... [more]
GLGA_RHOPB1.276e-3841.31Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_EXISA1.276e-3842.18Glycogen synthase OS=Exiguobacterium sp. (strain A... [more]
GLGA_TREDE1.667e-3842.40Glycogen synthase OS=Treponema denticola GN=glgA P... [more]
GLGA_RHOFD1.667e-3840.65Glycogen synthase OS=Rhodoferax ferrireducens (str... [more]
GLGA_OPITP1.667e-3841.12Glycogen synthase OS=Opitutus terrae (strain DSM 1... [more]
GLGA_FRAP21.667e-3838.98Glycogen synthase OS=Francisella philomiragia subs... [more]
GLGA_DESVM1.667e-3841.85Glycogen synthase OS=Desulfovibrio vulgaris (strai... [more]
GLGA_AERS41.667e-3838.79Glycogen synthase OS=Aeromonas salmonicida (strain... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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