FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ACTSZ (Glycogen synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.667e-38
Identity = 84/215 (39.07%), Postives = 130/215 (60.47%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++KAG+  SDMV TVSP YA+E+ + E   G++  L  + ++  + G++NG+D   W+P  D YI   Y   + M  K   K  LQ    LP + N+PV   I RL EQKG D+L       + +  Q+++LG+G   ++  +  L   +P+       ++ PL+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 EISYLKAGLFYSDMVTTVSPTYAKEITTTEFGYGLQGLLSTLDQQNRLAGVLNGVDDSIWHPNNDPYIHHHYKLKS-MSGKAKNKALLQERFNLPQNPNVPVFVMITRLTEQKGVDLLLQCADEIVNQGGQLMILGSGAPHLQDWVNWLASQHPDNVGVWIGYDEPLSHLMVAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRKTGGLADTVVD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_CLOAB (Glycogen synthase OS=Clostridium acetobutylicum GN=glgA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.177e-38
Identity = 90/211 (42.65%), Postives = 126/211 (59.72%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            I++MK GIL SD + TVS  YA+E +     G  LD ++R     + GIVNG+D    NP TDK +   +D+ST+ + K   K  LQ  + LPV  NIP+IG + RL  QKG D+++  +   +++ +Q++VLGTG    E   +     YP K     +FN  LA  I   +D  L+PS+FEPCG+ QL A+RYG++PIV  TGGL DTV
Sbjct:  199 ISFMKGGILFSDKLSTVSRTYAEE-IKDPYYGEHLDGLLRSRSYDLWGIVNGIDYDILNPETDKDLFFNFDSSTLYN-KTKNKIELQKMLNLPVSENIPMIGIVSRLVSQKGLDLISCVLEDLLQDGIQLVVLGTGDAKYENMFKYFAWKYPNKLSANIQFNNSLAQKIYGASDMFLMPSKFEPCGIGQLIALRYGSLPIVRETGGLKDTV 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_BRAJA (Glycogen synthase 2 OS=Bradyrhizobium japonicum GN=glgA2 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.177e-38
Identity = 90/235 (38.30%), Postives = 138/235 (58.72%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE------GFTGFQMGSFSVDCEA 703
            I+++KAG+  +D + TVSP YA+E+ S E  G+ L  ++R     + GI+NG+D+  WNP TD +I  ++ A   +  +   K  LQ +  L      P++G I RL  QKG D+L  AIP  + E +Q+ +LG+G + ++ + +      P +   V  ++  LAH+I AG+D +++PSRFEPCGL QL A+RYG VPIV+  GGL DT+ +        TGF+ G  + D  A
Sbjct:  200 ISFLKAGLQFADRITTVSPTYAREIQSDEG-GMGLGGLLRARAGALSGILNGIDIAVWNPQTDSHIAYRFGAED-LTFRAANKAVLQQQFNLDSSDEAPLLGVISRLSWQKGLDLLLEAIPTILGEGMQLALLGSGDRDLQDRYQAAARANPGRIGVVIGYDEILAHLIQAGSDALIVPSRFEPCGLTQLCALRYGAVPIVSRVGGLEDTIVDIGEAGREATGFKFGPVTADALA 432          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.177e-38
Identity = 93/233 (39.91%), Postives = 138/233 (59.23%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----AEGFTGFQMGSFSVDCEAV 706
            N +K G+  + ++ TVS  YA+E+ + E  G  LD ++R     + GI+NG+D +EWNP TD +I   Y  S  +  K L K  +Q   GLP   ++P+ G +GRL +QKG DILA AI   +  +VQ+++LG G+         +   YPEK      +N  L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+V     +  TG     +S D +A+
Sbjct:  209 NLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSADLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLVGRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNGLSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADAL 439          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOCS (Glycogen synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glgA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38
Identity = 86/214 (40.19%), Postives = 129/214 (60.28%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            KI  +KAG+  +D + TVSP YAQE + G   G  LD ++R     + GI+NG+D+  WNP +D  I  +YDA T+++A+   K  L+   GL    + P+   + RL  QKG D++  A+P  +    Q+ +LGTG K +E+        +P +   V  ++  L+H I AGAD +L+PSRFEPCGL Q++A+RYG +P+V+  GGL DTV +
Sbjct:  216 KIGLLKAGLYYADKLTTVSPTYAQE-IQGPAMGFGLDGLLRARARDLSGILNGVDLGLWNPASDPLIPARYDA-TLLEARQAAKAELRHAFGLGSVPDGPLFAVVSRLTHQKGIDLVLEALPRLLALGGQLAILGTGDKVLEQAAAAAMHDHPGRVGLVRAYDEALSHRIQAGADVLLVPSRFEPCGLTQMYALRYGALPLVSRVGGLADTVTD 427          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_NITEU (Glycogen synthase OS=Nitrosomonas europaea GN=glgA PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.714e-38
Identity = 92/213 (43.19%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++++KAGI  +  + TVSP YA+E +  E  G  L  ++  R   I GI+NG+D   WNP TD +I  KY +S  + AK + K ALQ E+GL  +  IP+   I RL  QKG DIL    P       Q+++LG G + +EKQL  L    P +      ++  L+H I A AD  L+PSRFEPCGL Q+++ RYGT PIV +TGGL+DTV +
Sbjct:  213 LSFLKAGIYYATRITTVSPTYARE-IQHEPLGFGLQGLLAERSNAITGIINGIDNTVWNPATDPHIVKKY-SSRNLAAKKINKLALQREMGLEENETIPLFAGISRLSYQKGYDILLQVAPMLADLPAQLVLLGKGDQSLEKQLVMLAQTNPARIAVRIDYDEALSHRINASADCFLMPSRFEPCGLNQMYSQRYGTPPIVHTTGGLIDTVTD 423          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBSL (Glycogen synthase OS=Vibrio splendidus (strain LGP32) GN=glgA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.850e-38
Identity = 87/212 (41.04%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS--TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +  +KAG++ +D +  VSP YA+EL +     G+  +   R   + GI+NG D   WNP TD ++  K+ A+  ++   K   K+ LQ +VGLPV  +  V G + RL  QKG   L   I  F+K  +QI+++GTG   +  QL++L  L+ +K   V  +N  LAH++ AG+DF L+PS FEPCGL Q+++M YGT+PIV S GGL D+V
Sbjct:  204 VTMLKAGVMCADKINAVSPTYAEELKTELGSHGMAAEFQHRSADLFGILNGCDYGAWNPETDAFLPRKFKATKHSMTRGKSACKQKLQQDVGLPVT-DCAVYGMVCRLTNQKGVHYLLPIIEQFLKNELQIVIVGTGDPVLASQLKELSALHSDKFSFVEAYNNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRSVGGLKDSV 414          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCM (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=glgA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.335e-38
Identity = 85/212 (40.09%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP TD Y+   Y  +  ++   K L K ALQ E+ LPV  ++P+ G + RL  QKG   L   +  F++ NVQ++++GTG+  +  +L ++   +  K   V  ++  LAH + AG+DF L+PS FE CGL Q+++M YGT+PIV   GGL DTV
Sbjct:  202 VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTV 412          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBCH (Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.335e-38
Identity = 85/212 (40.09%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP TD Y+   Y  +  ++   K L K ALQ E+ LPV  ++P+ G + RL  QKG   L   +  F++ NVQ++++GTG+  +  +L ++   +  K   V  ++  LAH + AG+DF L+PS FE CGL Q+++M YGT+PIV   GGL DTV
Sbjct:  202 VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTV 412          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_VIBC3 (Glycogen synthase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=glgA PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.335e-38
Identity = 85/212 (40.09%), Postives = 129/212 (60.85%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT-GIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            ++ ++AGI  +D V  VSP+YA EL++       +D+ +R+   + GIVNG D  EWNP TD Y+   Y  +  ++   K L K ALQ E+ LPV  ++P+ G + RL  QKG   L   +  F++ NVQ++++GTG+  +  +L ++   +  K   V  ++  LAH + AG+DF L+PS FE CGL Q+++M YGT+PIV   GGL DTV
Sbjct:  202 VSMLRAGIAFADKVNAVSPNYAAELLTPLGAHGLVDDFVRRARDLHGIVNGCDYSEWNPRTDHYLPATYSDEPESMRKGKALCKTALQEELHLPVT-DVPLFGMVCRLTHQKGFHYLLPILEQFLRNNVQVVIVGTGEPEVAARLNKIAHYHRAKFAFVETYSERLAHWVEAGSDFFLMPSEFEACGLNQIYSMAYGTLPIVREVGGLKDTV 412          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_ACTSZ1.667e-3839.07Glycogen synthase OS=Actinobacillus succinogenes (... [more]
GLGA_CLOAB2.177e-3842.65Glycogen synthase OS=Clostridium acetobutylicum GN... [more]
GLGA2_BRAJA2.177e-3838.30Glycogen synthase 2 OS=Bradyrhizobium japonicum GN... [more]
GLGA1_GEOSL2.177e-3839.91Glycogen synthase 1 OS=Geobacter sulfurreducens GN... [more]
GLGA_RHOCS3.714e-3840.19Glycogen synthase OS=Rhodospirillum centenum (stra... [more]
GLGA_NITEU3.714e-3843.19Glycogen synthase OS=Nitrosomonas europaea GN=glgA... [more]
GLGA_VIBSL4.850e-3841.04Glycogen synthase OS=Vibrio splendidus (strain LGP... [more]
GLGA_VIBCM6.335e-3840.09Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]
GLGA_VIBCH6.335e-3840.09Glycogen synthase OS=Vibrio cholerae GN=glgA PE=3 ... [more]
GLGA_VIBC36.335e-3840.09Glycogen synthase OS=Vibrio cholerae serotype O1 (... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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