FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PELCD (Glycogen synthase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.615e-33
Identity = 80/226 (35.40%), Postives = 129/226 (57.08%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------AEGFT 664
            +++++K+G++ +DM+ TVS  Y  E+ + +  G   D I+  R   + G++NG+D + WNP  D  +   Y     ++ K   K  LQ ++GL  D ++P++  + RL  QKG D++  A    ++  VQ+++LG+G +    +  QL   +P +      F+  LA +I AG+D  L+PS +EPCGL QL A+RYG+VP+V  TGGL DTV         A GFT
Sbjct:  201 QVSFLKSGLVYADMITTVSETYCAEIQTPQ-MGHGFDGILHARAARLFGVLNGIDDKLWNPQCDPALTAPYSVDD-LEGKAANKRQLQKQLGLSCDADVPLLTMVTRLASQKGLDLVEQAWEQLLQRGVQLVILGSGDQDFMDRFAQLGAQHPTQTAVRLGFDDRLARLIYAGSDMFLMPSHYEPCGLGQLIALRYGSVPVVRKTGGLADTVFDPQDQATQANGFT 424          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ESCF3 (Glycogen synthase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.615e-33
Identity = 76/215 (35.35%), Postives = 127/215 (59.07%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +I+++K+G+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T ++ K   K  LQ  +GL VD   P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QISFLKSGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVDDKAPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_DESHD (Glycogen synthase OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.615e-33
Identity = 85/211 (40.28%), Postives = 120/211 (56.87%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MKAGI+ SD V TVSP YA+E +     G  L  +I  RK  + GI+NG+  + W              S  +  K   +  LQ ++    +  IP++  I RL EQKG D+L   +   +  +++++VLGTG    E++L++    YP K R +  +   LAH I AGAD  L+PSRFEPCG+ Q+ AM YGT+PIV  TGGL DTV
Sbjct:  199 VNFMKAGIMHSDQVTTVSPTYARE-IQHPYFGEGLHGVIQGRKDSLLGILNGVP-RPW-------------PSPTLADKRANRMKLQEQLNFTNNEEIPILSMISRLVEQKGLDLLLHVLDEILALDIRLVVLGTGDAHYEERLQRFAEGYPGKLRVILGYQEELAHRIYAGADIFLMPSRFEPCGIAQMIAMSYGTIPIVRETGGLKDTV 394          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIME (Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.109e-33
Identity = 83/213 (38.97%), Postives = 124/213 (58.22%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            + ++K G+  +  + TVSP YAQE+++ E  G+ LD ++  R   + GIVNG+D + W+P TD +I   Y   T +  +   ++AL+   GL      P+   I RL  QKG D++A A    +    +++VLG+G   +E  L             V  ++ PL+H++ AGAD ILIPSRFEPCGL QL+ +RYG VP+VA TGGL DT+ +
Sbjct:  198 VGFLKGGLQTASAITTVSPSYAQEILTPEF-GMGLDGLLSSRVADLTGIVNGIDGETWDPQTDPHIPAHYGPGT-LKRRAGNRKALEERFGLEKGPG-PIFCVISRLTWQKGMDLVAEAADDIVALGGKLVVLGSGDPALESALMAAASRNRGHIGMVTGYDEPLSHLMQAGADAILIPSRFEPCGLTQLYGLRYGCVPVVARTGGLTDTIID 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALTY (Glycogen synthase OS=Salmonella typhimurium GN=glgA PE=3 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 73/216 (33.80%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALSV (Glycogen synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 73/216 (33.80%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALPK (Glycogen synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 73/216 (33.80%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALPC (Glycogen synthase OS=Salmonella paratyphi C (strain RKS4594) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 73/216 (33.80%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYKRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALPB (Glycogen synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glgA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 73/216 (33.80%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_SALPA (Glycogen synthase OS=Salmonella paratyphi A GN=glgA PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.754e-33
Identity = 73/216 (33.80%), Postives = 129/216 (59.72%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV++
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_PELCD1.615e-3335.40Glycogen synthase OS=Pelobacter carbinolicus (stra... [more]
GLGA_ESCF31.615e-3335.35Glycogen synthase OS=Escherichia fergusonii (strai... [more]
GLGA_DESHD1.615e-3340.28Glycogen synthase OS=Desulfitobacterium hafniense ... [more]
GLGA1_RHIME2.109e-3338.97Glycogen synthase 1 OS=Rhizobium meliloti GN=glgA1... [more]
GLGA_SALTY2.754e-3333.80Glycogen synthase OS=Salmonella typhimurium GN=glg... [more]
GLGA_SALSV2.754e-3333.80Glycogen synthase OS=Salmonella schwarzengrund (st... [more]
GLGA_SALPK2.754e-3333.80Glycogen synthase OS=Salmonella paratyphi A (strai... [more]
GLGA_SALPC2.754e-3333.80Glycogen synthase OS=Salmonella paratyphi C (strai... [more]
GLGA_SALPB2.754e-3333.80Glycogen synthase OS=Salmonella paratyphi B (strai... [more]
GLGA_SALPA2.754e-3333.80Glycogen synthase OS=Salmonella paratyphi A GN=glg... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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