FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PELLD (Glycogen synthase OS=Pelodictyon luteolum (strain DSM 273) GN=glgA PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.116e-29
Identity = 71/230 (30.87%), Postives = 125/230 (54.35%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTGI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE----GFTGFQMGSFSVD 694
            +N +  G+  +DM+ T S  +A E++  E  G  L  I+  + GI  GIVNG+D ++WNP TDK I  ++ A+  MD K   + AL  EV +P +   PV+G I   ++ +G+ ++  ++   +  ++ +++ G G K  EK        +P++            H+ IAG D +++  + E CG++Q+ AM YGT+P+  + GG+V+T+ E    G +GF    ++ D
Sbjct:  211 VNMLYTGVENADMLTTTSKLHADEILHDEIPGCGLQQILAGQNGILHGIVNGIDTRQWNPSTDKLIKKRF-ATDRMDGKLDNRAALSEEVHMPFEDGRPVVGVIMHFDDFQGAVLIEKSLKKLVALDIHLLICGAGDKKYEKSFRDFADAHPDRVSLSTDCPESFLHLAIAGLDMLVMAGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIDEVSEGGGSGFIFREYTPD 439          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPK (Glycogen synthase OS=Pseudomonas putida (strain KT2440) GN=glgA PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.375e-29
Identity = 74/229 (32.31%), Postives = 127/229 (55.46%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVD 694
            K++++KAG+  S  + TVS  YA+E+ + E  G  LD  +        + GI NG+D + W+  TDK++   +  +   + K    + ++   GL  D   P+   + RL  QKG D+      + +++  QI ++G G+   E+ + +L + +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+  G TGF     +V+
Sbjct:  239 KLSFLKAGLAYSSHITTVSATYAREITTPEF-GCGLDGFLASKAQQGLLGGIPNGID-ESWDSATDKHLQHNFSIND-WEGKARNTQEVRELFGLD-DSEGPLFAVVSRLVYQKGLDLTLGVADYIVEQGGQIAIIGRGEPEEEQAMRELALRHPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIECGVTGFLFNESTVE 463          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNY3 (Probable glycogen synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=glgA2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29
Identity = 78/213 (36.62%), Postives = 117/213 (54.93%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQEL-VSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQL---EQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            IN+MK GI+ S+ V TVSPH+A E   S    G+     I +    GI+NG+D + WNP  D  +   +   T  D K   K+AL+  + L  D   P++ FIGRL+ QKG  ++  +I + + +  Q ++LG+  +P   +    E+  +           F+  LAH+I   AD I++PS +EPCGL Q+  +RYG VP+V   GGLV+TV
Sbjct:  205 INFMKGGIVYSNYVNTVSPHHAWEARFSDISCGLGHTLEIHQQKFGGILNGLDYEVWNPEIDPLLASNFSVKTFGD-KAKNKQALRERLLLETDDKKPMLCFIGRLDGQKGVHLVHHSIYYALSQGAQFVLLGSATEPNLSKWFWHEKQHLNDNPNVHLELGFDEELAHLIYGAADIIVVPSNYEPCGLTQMIGLRYGAVPVVRGVGGLVNTV 416          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_ANASP (Probable glycogen synthase 2 OS=Anabaena sp. (strain PCC 7120) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 7.020e-29
Identity = 81/215 (37.67%), Postives = 122/215 (56.74%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MK GI+ S+ V TVSP++A E     D G  L + +   K    G++NG+D   WNP  D++I   Y      + K   K+AL+  + L    + P+I +IGRL+ QKG  ++  AI H + +  Q ++LG+    G     +  +Q     P+    +  FN  L+H+I AGAD I++PS +EPCGL Q+  ++YGTVPIV   GGLV+TV
Sbjct:  205 LNYMKGGIVYSNAVTTVSPNHALE-AQYTDVGCGLGHTLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDD-FEQKLYNKKALRERLLLQA-ADKPIIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVHLELG-FNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTV 415          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSEU2 (Glycogen synthase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=glgA PE=3 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 7.762e-28
Identity = 72/228 (31.58%), Postives = 126/228 (55.26%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVD 694
            +++++KAG+  +  + TVS  YA+E+ + E   G+E  L +   K  + GI NG+D + W+  TD+++ + + A      K +  + ++    L      P+   + RL  QKG D+      H +    QI ++G G+   E+ + +L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+ +G TGF     +V+
Sbjct:  203 QLSFIKAGMAFASHITTVSATYAREITTPEFGCGLEGFLQSKANKGQLSGIPNGID-ESWDAATDEHL-ICHFAPNEWTRKEINADYVRELFELDASTG-PLFAVVSRLVYQKGLDLTIGVAEHIVNNGGQIAIIGRGEPEEEEAMRELAARFPGRVGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFNESTVE 427          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSESM (Glycogen synthase OS=Pseudomonas syringae pv. tomato GN=glgA PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.014e-27
Identity = 72/229 (31.44%), Postives = 126/229 (55.02%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGSFSVD 694
            K++++KAG+  ++ + TVS  YA+E+ + E  G  L+  ++    K  + GI NG+D + W+  TD+++ + + A      K +  + ++    L      P+   + RL  QKG D+      H +    QI ++G G+   E  + +L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+ +G TGF     +V+
Sbjct:  203 KLSFIKAGMAFANHITTVSATYAREITTPEF-GCGLEGFLQSKADKGQLSGIPNGID-ESWDAATDEHL-ICHFAPNEWTRKEINADYVRELFELDASSG-PLYAVVSRLVYQKGLDLTIGVAEHIVNNGGQIAIIGRGEPEEEDAMRELAARFPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGFLFNESTVE 427          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSE14 (Glycogen synthase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=glgA PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.729e-27
Identity = 72/220 (32.73%), Postives = 122/220 (55.45%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            K++++KAG+  +  + TVS  YA+E+ + E   G+E  L +   K  + GI NG+D + W+  TD+++ + + A      K +  + ++    L      P+   + RL  QKG D+      H +    QI ++G G+   E  + +L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+ +G TGF
Sbjct:  203 KLSFIKAGMAFASHITTVSATYAREITTPEFGCGLEGFLQSKANKGQLSGIPNGID-ESWDAATDEHL-ICHFAPNEWTRKEINADYVRELFELDASTG-PLYAVVSRLVYQKGLDLTIGVAEHIVNNGGQIAIIGRGEPEEEDAMRELAARFPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIEDGVTGF 419          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSEF5 (Glycogen synthase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=glgA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 72/221 (32.58%), Postives = 116/221 (52.49%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            K++++KAG+  +  + TVS  YAQE+ +    G  LD  +        + GI NG+D + W+  TD ++   +      D K      ++   GL      P+   + RL  QKG D+  A     ++   QI ++G G+   E+ +  L   +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+  G TGF
Sbjct:  208 KLSFLKAGMAYASHITTVSATYAQEITTPAF-GCGLDGFLASKTQQGLLSGIPNGID-ESWDAATDAHLLTPFSIGD-WDGKAANAAHVRQMFGLDASSG-PLFAVVSRLVYQKGLDLTEAVAEFIVQSGGQIAIIGRGEPEEEQSMRALARRFPGRIGVHIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIENGVTGF 424          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSEAE (Glycogen synthase OS=Pseudomonas aeruginosa GN=glgA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 74/221 (33.48%), Postives = 120/221 (54.30%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +++++KAGI  +  + TVS  YAQE+ + E  G  L  I++    K  + GIVNG+D   W P  D ++   + A      K      ++   GL   +  P+   + RL +QKG D+        ++   +++ +G G+  +EK + +L   +P +      F+   A  I AG+DF+L+PSR+EPCGL QL+A  +G++PI   TGGL DT+ +G TGF
Sbjct:  229 RLSFLKAGIAHAHHITTVSETYAQEITTPE-YGCGLHGILKYKVEKRQLSGIVNGID-DSWQPHCDPHLVACFSARQ-WAGKRANTRYVEERFGLEPGKG-PLFAVVSRLVQQKGIDLTLEISDALLQAGGRLVSIGRGEPNLEKAMLELARRHPGQVGVHIGFDETEARRIYAGSDFLLMPSRYEPCGLSQLYAQCFGSLPIARCTGGLADTIVDGVTGF 445          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PSEA7 (Glycogen synthase OS=Pseudomonas aeruginosa (strain PA7) GN=glgA PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.581e-27
Identity = 74/221 (33.48%), Postives = 119/221 (53.85%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGF 670
            +++++KAGI  +  + TVS  YAQE+ + E  G  L  I++    K  + GIVNG+D   W P  D ++   + A      K      ++   GL   +  P+   + RL +QKG D+        ++   +++ +G G+  +EK +  L   +P +      F+   A  I AG+DF+L+PSR+EPCGL QL+A  +G++PI   TGGL DT+ +G TGF
Sbjct:  229 RLSFLKAGIAHAHHITTVSETYAQEITTPE-YGCGLHGILKCKVEKRQLSGIVNGID-DSWQPHCDPHLVAGFSARQ-WAGKRANTRYVEERFGLEPGKG-PLFAVVSRLVQQKGIDLTLEISDALLQAGGRLVSIGRGEPSLEKAMLDLSRRHPGQVGVHIGFDETDARRIYAGSDFLLMPSRYEPCGLSQLYAQCFGSLPIARCTGGLADTIVDGVTGF 445          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_PELLD4.116e-2930.87Glycogen synthase OS=Pelodictyon luteolum (strain ... [more]
GLGA_PSEPK5.375e-2932.31Glycogen synthase OS=Pseudomonas putida (strain KT... [more]
GLGA2_SYNY37.020e-2936.62Probable glycogen synthase 2 OS=Synechocystis sp. ... [more]
GLGA2_ANASP7.020e-2937.67Probable glycogen synthase 2 OS=Anabaena sp. (stra... [more]
GLGA_PSEU27.762e-2831.58Glycogen synthase OS=Pseudomonas syringae pv. syri... [more]
GLGA_PSESM1.014e-2731.44Glycogen synthase OS=Pseudomonas syringae pv. toma... [more]
GLGA_PSE141.729e-2732.73Glycogen synthase OS=Pseudomonas syringae pv. phas... [more]
GLGA_PSEF58.581e-2732.58Glycogen synthase OS=Pseudomonas fluorescens (stra... [more]
GLGA_PSEAE8.581e-2733.48Glycogen synthase OS=Pseudomonas aeruginosa GN=glg... [more]
GLGA_PSEA78.581e-2733.48Glycogen synthase OS=Pseudomonas aeruginosa (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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