FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9445 contig Ccv1_Contig9445:1004..1715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 4.529e-44
Identity = 95/223 (42.60%), Postives = 142/223 (63.68%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTGFQMGS 682
            ++++MKAG+  +D + TVSP YA+E+++ E  G  LD ++R     + GI+NG+DV  W+P  D ++   + A  +   K   K ALQ EVGLPV   +PV G + RL EQKG D++AAA+P  +  +VQ+++LG+G    ++   +    +P++      F+  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V + GGL DTV E F G   G+
Sbjct:  197 QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFTAGDLA-GKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDPAYQETFARAAREHPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTV-EDFDGVARGT 416          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.915e-44
Identity = 99/212 (46.70%), Postives = 138/212 (65.09%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            N++K GI+ +  + TVSP YA+E+ + E  G  LD  +R    +  GI+NG+D  E+NP TDK I V +D ++ ++ K   K ALQ E+GLPV  ++PVIG I RL EQKG D++ AA    +  ++Q +VLGTG++  E+  + L   +PEK      FN+ LA  I AG+D  L+PSR+EPCGL Q+ AMRYGT+P+V  TGGL DTV E
Sbjct:  191 NFLKTGIVTATAISTVSPTYAKEIQTPE-YGAGLDETLRALSDRLFGILNGIDYSEYNPATDKRIPVNFDINS-LEKKKENKIALQKELGLPVI-DVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQFVVLGTGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKE 399          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.009e-43
Identity = 96/211 (45.50%), Postives = 130/211 (61.61%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MK GI+ SD +  VSP Y +E +  E  G +LD ++RK    + GIVNG+D   +NP TD YI  +YDA ++ + K   K ALQ   GLP   + P+I  + RL +QKG D++       ++E+VQ I+LG+G    EK  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV
Sbjct:  198 VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYNGKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KSKNKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEKFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTV 406          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.318e-43
Identity = 106/231 (45.89%), Postives = 140/231 (60.61%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------AEGFTGFQMGSFS 688
            +NWMK GIL +D V TVSP YA+E+ + E  G  LD I+R    K  GI+NG+D +++NP TD  I   YD    +  K   K ALQ E+ LP+  NIP+IG + RL  QKG  +L   + + ++ NVQI++LG G    E +L ++   YP+K + +  F++ LA  I AGAD  L+PS FEPCGL QL A+RYGT+PIV   GGL DTV        EG TGF    FS
Sbjct:  198 VNWMKTGILYADRVTTVSPSYAREIQTVEF-GQGLDAILRMCSHKLTGILNGIDFEKYNPKTDPVIKKNYDVYH-LHHKSKDKIALQKELDLPIKPNIPLIGMVSRLTAQKGCQLLLDELDNILQFNVQIVILGNGDPYYEHRLMEIAERYPDKLKVILAFDVKLAQRIYAGADSFLMPSAFEPCGLSQLIALRYGTLPIVHEIGGLADTVWVYDETTNEG-TGFGFKEFS 425          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_STRA5 (Glycogen synthase OS=Streptococcus agalactiae serotype V GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43
Identity = 98/230 (42.61%), Postives = 137/230 (59.57%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE------GFTGFQMGSFS 688
            +NWMKA IL SD V TVSP YA E+ + E  G  LD I+R     + GIVNG+D    NP TD ++   +  S  ++ K   K ALQ  +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG    E+        YPEK      F++ LA  I A +D  ++PS FEPCGL Q+ AMRYG++P+V   GGL DTV          TGF    FS
Sbjct:  198 LNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFS 425          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_STRA3 (Glycogen synthase OS=Streptococcus agalactiae serotype III GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43
Identity = 98/230 (42.61%), Postives = 137/230 (59.57%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE------GFTGFQMGSFS 688
            +NWMKA IL SD V TVSP YA E+ + E  G  LD I+R     + GIVNG+D    NP TD ++   +  S  ++ K   K ALQ  +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG    E+        YPEK      F++ LA  I A +D  ++PS FEPCGL Q+ AMRYG++P+V   GGL DTV          TGF    FS
Sbjct:  198 LNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFS 425          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_STRA1 (Glycogen synthase OS=Streptococcus agalactiae serotype Ia GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43
Identity = 98/230 (42.61%), Postives = 137/230 (59.57%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE------GFTGFQMGSFS 688
            +NWMKA IL SD V TVSP YA E+ + E  G  LD I+R     + GIVNG+D    NP TD ++   +  S  ++ K   K ALQ  +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG    E+        YPEK      F++ LA  I A +D  ++PS FEPCGL Q+ AMRYG++P+V   GGL DTV          TGF    FS
Sbjct:  198 LNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFS 425          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43
Identity = 93/217 (42.86%), Postives = 141/217 (64.98%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGFTG 667
            +N++KAG++ SD + TVSP YA+E+ + E +G  LD ++R     + GI+NG+D  EWNP  D ++  +Y     +  K + K  L A  GL  D   PV GF+ RL  QKG D+L  A+P  +  +++++ +G+G+ P+E+ L  L+  YP++      F+  L+H++ AGADF L+PSR+EPCGL Q++++RYGTVPIV +TGGLVDTV  G  G
Sbjct:  203 VNFLKAGLVFSDALTTVSPTYAREIQTPE-QGYGLDGLLRHRAHRLHGILNGVDTHEWNPEDDAFLPARYGLKD-LSGKAVCKRELLARFGLE-DGPAPVFGFVSRLAWQKGMDLLLEALPAALHADIRVVGVGSGEGPLEEGLLALQSRYPKQVGVHIGFDPGLSHLVEAGADFFLMPSRYEPCGLNQMYSLRYGTVPIVRATGGLVDTVEGGLDG 416          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.721e-43
Identity = 88/211 (41.71%), Postives = 137/211 (64.93%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MKAG++ ++ + TVSP Y  E++     G  L+ ++  R   ++GI+NG+D ++++P TD+++   YD  TV + K   K ALQ E+GLPV+ ++P+ GF+ RL +QKG D+LA  +P   + + Q I+LG+G+   E   +    + P+K      F++ LA  I AG+D  L+PSRFEPCGL QL +M+YG++PIV  TGGL DTV
Sbjct:  201 VNYMKAGLVHANQITTVSPSYRDEIMDPY-YGETLEPVLQHRAVDVRGILNGIDYRQFSPETDEHLVENYDVKTVEEGKAANKAALQQELGLPVNPDVPLFGFVSRLVDQKGIDLLAHILPDLFELDAQFIILGSGEAEYEGLFQHASTIRPDKVASYIGFDVGLAQRIYAGSDAFLMPSRFEPCGLSQLISMKYGSLPIVRETGGLRDTV 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_STRPI (Glycogen synthase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.936e-43
Identity = 97/230 (42.17%), Postives = 136/230 (59.13%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA-----EGF-TGFQMGSFS 688
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      EG  TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSANITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVCAFNPIEGSGTGFSFDNLS 425          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_ANASK4.529e-4442.60Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]
GLGA_KOSOT5.915e-4446.70Glycogen synthase OS=Kosmotoga olearia (strain TBF... [more]
GLGA_BACC11.009e-4345.50Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA_LACAC1.318e-4345.89Glycogen synthase OS=Lactobacillus acidophilus GN=... [more]
GLGA_STRA51.721e-4342.61Glycogen synthase OS=Streptococcus agalactiae sero... [more]
GLGA_STRA31.721e-4342.61Glycogen synthase OS=Streptococcus agalactiae sero... [more]
GLGA_STRA11.721e-4342.61Glycogen synthase OS=Streptococcus agalactiae sero... [more]
GLGA_MYXXD1.721e-4342.86Glycogen synthase OS=Myxococcus xanthus (strain DK... [more]
GLGA_EXIS21.721e-4341.71Glycogen synthase OS=Exiguobacterium sibiricum (st... [more]
GLGA_STRPI2.936e-4342.17Glycogen synthase OS=Streptococcus pneumoniae (str... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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