FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41
Identity = 89/213 (41.78%), Postives = 127/213 (59.62%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            I ++KAG+  +D + TVSP YA E + G + G+ L+ ++R     + GI+NG+D + W+P  D+ I   YD  T+  A+   K+ALQA  GL  +    + G I RL  QKG D+L   +P  + +  Q+ +LG G  P+E       + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +
Sbjct:  200 IGYLKAGLQLADRITTVSPSYALE-IQGSEAGMGLEGLLRLRAGQLSGILNGVDTKVWDPSADQLIPATYDVETI-GARARNKQALQARFGLRAESGALLFGVISRLSWQKGLDMLLEVLPGMLADGAQLALLGAGDAPLEAGFRDAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_MOOTA (Glycogen synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=glgA PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.589e-41
Identity = 92/214 (42.99%), Postives = 143/214 (66.82%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            ++++MKAGIL +D+V TVS  YA E+ + E  G  LD ++RK    ++GI+NG+D +E++P TD+ + V YDA   ++ K   K ALQ E+ LPV R++PV+G I RL  QKG D+LAA +   +++++Q ++LG+G+   ++   + ++ Y +K      F+  LA  I AG D  L+PSRFEPCGL Q+ ++RYG VP+V +TGGL DT+ +
Sbjct:  198 QVSYMKAGILYADLVNTVSKKYALEIQTPE-YGERLDGLLRKRAADLRGILNGIDYEEFDPATDRRLAVNYDADH-LEKKGENKAALQREMELPV-RDVPVLGLISRLVSQKGLDLLAAILDPLMQQDLQFVLLGSGEDYYQQLFSRYKVKYRDKMAVKIGFDPVLAQHIYAGCDIFLMPSRFEPCGLGQMISLRYGAVPVVRATGGLEDTIKD 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.687e-41
Identity = 94/235 (40.00%), Postives = 135/235 (57.45%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEG--------FTGFQMGSFSVD 694
            +I++MK G+  +D + TVSP YA+E + G ++G  LD ++R     + GI+NG+D   WNP  D  I   Y     +  K   K  LQAE+GL  D  +P++  + RL EQKG  ++  A+P  I+   Q  +LG+G   ME +  +L   +P  A     ++   AH +IAG+D IL+PSRFEPCGL QL+ ++YGT+P+V   GGLVDTVA+          TGF    FS D
Sbjct:  206 QISFMKGGLYFADRITTVSPTYARE-IQGAEQGCGLDGLLRDRDADLSGILNGVDDAVWNPAGDALIPATYTRRK-LTGKAQCKATLQAELGLAEDPAVPLLCVVSRLTEQKGLHLVLQALPALIERGFQFALLGSGDAGMENEFRRLAEQHPTAAAVRLGYDEAFAHRLIAGSDLILVPSRFEPCGLTQLYGLKYGTLPVVRRVGGLVDTVADARLETLDHDATGFVFDDFSAD 438          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BACCN (Glycogen synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 96/211 (45.50%), Postives = 126/211 (59.72%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            IN+MK GI+ +D + TVS  Y +E +  E  G +LD ++RK   K  GIVNG+D   +NP  D YI   YD  T+  AK   K ALQ   GLP   N P+I  + RL +QKG D++ A     ++E+VQ I+LG+G    E+  E +   Y EK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YG +PIV  TGGL DTV
Sbjct:  198 INFMKGGIIAADHITTVSSTYKEE-IQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPRLDSYITATYDVDTLY-AKRENKWALQHYFGLPEKENTPIISMVTRLTKQKGLDLVRAVFQEIMQEDVQCIILGSGDSEYEQFFEWMAYEYSEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALTYGVIPIVRETGGLNDTV 406          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LACPL (Glycogen synthase OS=Lactobacillus plantarum GN=glgA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 103/232 (44.40%), Postives = 142/232 (61.21%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL--KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA--EGFTGFQMGSFSVD 694
            ++NW+K GI  +D V TVSP YAQE+ +    G  LD ++R    K  GI+NG+D+Q ++P TD  +   Y A    D KP    K ALQ  +GLPV +N+PV+  + RL +QKG D+L  A+  F+++ +VQ+IVLGTG   +E+ L   +  YP+K     +F+  LA  I A +D  L+PS FEPCGL Q+ AM YGT+PIV + GGL DTV     +TG Q   FS D
Sbjct:  199 QVNWLKGGINFADAVNTVSPTYAQEIQTPAF-GERLDGVLRANRYKLSGILNGIDMQLYDPATDLALTANYSAK---DLKPKRQNKRALQRRLGLPV-KNMPVLAVVSRLTKQKGIDLLLDALNPFLQQQDVQLIVLGTGDPALERALRTYQSAYPQKVVAAIQFDTQLAQQIYAASDIFLMPSAFEPCGLSQMMAMHYGTLPIVHAVGGLRDTVIPYNRYTG-QGTGFSFD 424          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_DESAA (Glycogen synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glgA PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 93/237 (39.24%), Postives = 145/237 (61.18%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE---------GFT--GFQMGSFS 688
            +++ +KAGI  ++ ++TVSP Y++E+ + E +G  LD ++RK    + GI+NG+D Q W+P TDK+I   Y  +  M  K   K+AL  E+G+     N PV G + RL  QKG +++  A+P  ++  +  I+LG G++   + L +L   YP + R    FN PLAH I+AGAD + +PS +EPCGL Q++A++YGT+P+  +TGGL DTV +         GFT   F  G+F+
Sbjct:  197 QLSLLKAGIAYANKLVTVSPTYSREIQTTE-QGAGLDGLMRKRSQDLAGILNGVDFQVWSPETDKHIPCNYSTAD-MAGKGKCKKALLDEMGMDSQLMNAPVAGMVTRLFSQKGIELVIGAVPEIVENGMGFILLGNGEESYVRDLRRLAQAYPGRFRFEEAFNEPLAHRIMAGADMLCVPSLYEPCGLTQMYALQYGTIPVARATGGLADTVRDIKAFAGKGNGFTFDAFSPGAFA 431          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP2 (Glycogen synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 93/216 (43.06%), Postives = 130/216 (60.19%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP---VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            I ++KAG+  +D + TVSP YA E + G D G+ L+ ++R     + GI+NG+D + W+P  D+ I   YD  T+  A+   K+ALQ+  GL   RN P   + G I RL  QKG D+L   +P  + E  Q+ +LG G  P+E+      + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +
Sbjct:  200 IGYLKAGLQLADRITTVSPTYALE-IQGPDAGMGLEGLLRLRADRLSGILNGIDTRVWDPTADELIPATYDIETI-GARARNKQALQSRFGL---RNAPDALLYGVISRLSWQKGLDMLLDVLPGMLAEGAQLALLGAGDTPLEQGFRAAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 98/235 (41.70%), Postives = 132/235 (56.17%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV---------AEGFTGFQMG 679
            ++++MKAG+  +  + TVSP YA E+ + E  G  LD +IR  G  + GI+NG+D   WNP +D  I   Y A  ++D K L K ALQ E+GL VD   PV   + RL  QKG D+L  A+P  +        Q+ V G G   +E         +P +      ++  LAH I+AGAD +L+PSRFEPCGL QL+A+RYGTVP+V   GGL DTV         A+  TGF  G
Sbjct:  200 QLSFMKAGLKYAHRITTVSPTYAHEIAT-EAFGCGLDGVIRARGADVSGILNGVDGAVWNPASDPLIAAPYSAD-MLDGKALCKAALQRELGLAVDAGAPVFAVVSRLTSQKGLDLLLDALPALLNFPAAGGPQLAVQGNGDPALEAAFTAAAAAHPGRVAVRLVYDEALAHRIMAGADAMLVPSRFEPCGLTQLYALRYGTVPVVRHVGGLADTVVGASEASVQADRATGFMFG 432          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOMG (Glycogen synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.364e-40
Identity = 95/228 (41.67%), Postives = 138/228 (60.53%), Query Frame = 2
Query:   26 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAEGF-------TGFQMGS 682
            N +K G+  + ++ TVS  YA+E+ + E  G  LD ++R+    + GI+NG+D ++WNP  D YI  +Y A+  +  K L K  LQ   GLP   ++P+ G + RL +QKG DILA AI   +  +VQ ++LG G+         ++  YP+K      +N PL+H I AGADF L+PS FEPCGL Q++++RYGT+PIV +TGGL D+V E F       TGF+  S
Sbjct:  209 NLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRERAADLYGILNGVDYEDWNPEVDPYIAARYSAAD-LSGKKLCKRDLQRTFGLPERDDVPLFGMVSRLVKQKGVDILAEAIHRILALDVQFVMLGAGEPWTHFYFGDIKNAYPDKFNIFVGYNNPLSHQIEAGADFFLMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSV-ENFDEKTLVGTGFKFWS 433          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LACS1 (Glycogen synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40
Identity = 100/231 (43.29%), Postives = 134/231 (58.01%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------AEGFTGFQMGSFS 688
            +N+MK GIL +D V TVSP YA E+ + E  G  LD I+R     ++GI+NG+D +  NP TDK +   Y A   +  K   K ALQ E GLP  +++PVI  + RL  QKG  ++ + + + ++ +VQ+IVLGTG    E         YP+K      F++ LA  I AGAD  L+PS FEPCGL Q+ +MRYGT+PIV   GGL D+V        EG TGF    FS
Sbjct:  199 VNFMKTGILYADKVNTVSPTYASEIQT-EAFGQGLDEILRMHNWKLRGILNGIDYERNNPATDKNLVANYSAKK-LKGKVKDKLALQKEFGLPQRKDVPVIAMVSRLTAQKGFQLVVSEMQNLVQFDVQVIVLGTGDANFEHDFRYFADTYPDKVGAAITFDVGLAQRIYAGADMFLMPSAFEPCGLSQMISMRYGTLPIVHQIGGLQDSVQPFNPVTGEG-TGFGFHDFS 426          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_RHOPS3.589e-4141.78Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_MOOTA3.589e-4142.99Glycogen synthase OS=Moorella thermoacetica (strai... [more]
GLGA_LEPCP4.687e-4140.00Glycogen synthase OS=Leptothrix cholodnii (strain ... [more]
GLGA_BACCN7.995e-4145.50Glycogen synthase OS=Bacillus cereus subsp. cytoto... [more]
GLGA_LACPL1.044e-4044.40Glycogen synthase OS=Lactobacillus plantarum GN=gl... [more]
GLGA_DESAA1.044e-4039.24Glycogen synthase OS=Desulfatibacillum alkenivoran... [more]
GLGA_RHOP21.364e-4043.06Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_POLNA1.364e-4041.70Glycogen synthase OS=Polaromonas naphthalenivorans... [more]
GLGA1_GEOMG1.364e-4041.67Glycogen synthase 1 OS=Geobacter metallireducens (... [more]
GLGA_LACS12.326e-4043.29Glycogen synthase OS=Lactobacillus salivarius subs... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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