FC868653

Overview
NameFC868653
Unique NameFC868653
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length713
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.326e-40
Identity = 91/228 (39.91%), Postives = 139/228 (60.96%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA--EGFTGFQMGSFSVD 694
            I+++K+GI+ +D V TVSP+YA+E+   E  G  ++ ++R  +    GI+NG+D   W+P  D  I   Y++ + +  K   K+ LQ  +GL V  + P++G + R++ QKG D++   +  + K+ VQ +V+GTG   MEK    L      K   VAK +  LAH + AG+D  L+PSRFEPCGL Q+ +MRYGTVPIV+  GGL+DTV   +G T +  G F ++
Sbjct:  202 ISYLKSGIVYADYVNTVSPNYAKEITLDEKMGFGMEGLLRSRQDTFCGILNGLDTGVWDPEHDPLIPYSYESFSPVKGKAACKQFLQNMLGLEVSPSKPLVGIVSRMDYQKGLDLIPGVVNKY-KDKVQFVVVGTGDSGMEKAFMALAKNNVGKVAYVAKVDEELAHRVYAGSDIFLMPSRFEPCGLSQMISMRYGTVPIVSRVGGLLDTVKGYDGITKYATGFFILE 428          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOSL (Glycogen synthase 2 OS=Geobacter sulfurreducens GN=glgA2 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.968e-40
Identity = 103/247 (41.70%), Postives = 142/247 (57.49%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK------FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVA-------EGFTGFQMGSFSVDC--EAVD 709
            ++N MK  IL +D++ TVS  Y +E+++   +G  L+ ++ + G  + GIVNG+D  EWNP  DK I   Y A  +   K   K  LQ E+G+P   ++P+IG + RL EQKG D++   +P   +  +Q ++LGTG          LE L   +++G A       FN PLA  I AG+D  L+PSRFEPCGL QL AMRYGTVP+V  TGGL DTV        EG TGF    F+ D   EA++
Sbjct:  201 QLNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARRGDDLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIGMVSRLAEQKGIDLVLELLPRLAESELQFVLLGTGNACY------LERLNSFRSKGAANISINLGFNDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG-TGFTFEDFTADACWEAIE 438          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOMG (Glycogen synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.182e-40
Identity = 97/234 (41.45%), Postives = 133/234 (56.84%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------AEGFTGFQMGSFSVD 694
            +IN +K  IL +D + TVS  Y  E++S   +G  L+ ++  R+  + GI+NG+D +EWNP  D+ I   Y + ++   K   K  LQ E+GL    +IP+IG +GR+ EQKG D++   +P F  E +Q+++LGTG   +  QL +      +       F  PLA  I AG D  L+PSRFEPCGL QL A+ YGTVPIV  TGGL DTV        EG  GF    FS D
Sbjct:  201 RINLLKGAILAADAITTVSETYCHEILS-PGQGCGLEGVLERRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLA-GKGADKRELQRELGLKAGASIPIIGMVGRIVEQKGIDLVIDLLPRFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGFKEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIVRRTGGLADTVIDVTANPREG-NGFSFTEFSAD 431          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 90/213 (42.25%), Postives = 125/213 (58.69%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            I ++KAG+  +D + TVSP YA E + G + G+ LD ++  R   + GI+NG+D   WNP +D  I   YD  ++  A+   K+ LQA  GL  +    + G I RL  QKG D+L  A+P  I    Q+ +LG+G   +E+        YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +
Sbjct:  200 IGYLKAGLQLADRITTVSPSYAAE-IQGSEAGMGLDGLLQLRADRLSGILNGIDTDVWNPASDALISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLQALPQLIGGGAQLALLGSGDAELEQGYAAAARKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPA (Glycogen synthase OS=Rhodopseudomonas palustris GN=glgA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 90/213 (42.25%), Postives = 125/213 (58.69%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            I ++KAG+  +D + TVSP YA E + G + G+ LD ++R     + GI+NG+D   WNP +D  I   YD  ++  A+   K+ LQA  GL  +    + G I RL  QKG D+L  A+P  I    Q+ +LG+G   +E+        YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +
Sbjct:  200 IGYLKAGLQLADRITTVSPTYAAE-IQGSEAGMGLDGLLRLRADRLSGILNGIDTDVWNPASDALISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLEALPQLIGGGAQLALLGSGDAELEQGYAAAARKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVD 410          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_PETMO (Glycogen synthase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glgA PE=3 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 93/214 (43.46%), Postives = 136/214 (63.55%), Query Frame = 2
Query:   20 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVAE 655
            K+N +K GIL S+++ TVSP YA+E+ S E+ G  L+ I  +R   + GI+NG+D   ++PL D +I   +      + K   K +LQ  +GL  D NI +I FIGRL EQKG D+++  +   +  ++Q ++LGTG K  E+    L  LYP+K      F++ LA  I AG+D  L+PS++EPCGL Q+++MRYGTVP+V  TGGL DTV+E
Sbjct:  200 KVNVLKGGILFSNIINTVSPTYAKEIQS-EEYGYGLEGILKVRSEDLFGILNGIDYSIYDPLKDPHI---FHPIESYEDKLKNKTSLQEYLGLTKDENITLISFIGRLFEQKGIDLISKIMDLLLLNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSE 409          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LACCB (Glycogen synthase OS=Lactobacillus casei (strain BL23) GN=glgA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            INW+K GI  +D+V TVSP YA+E+ +    G  LD  +RK   K  GI+NG+D + +NP TD+ +   YDA  +   K   K+ALQ E+ LP  R  P+   + RL  QKG+D+L  A+ +F ++ NVQ++VLGTG + +E+ L  L+  +P +      F+  LA  I AGAD+ ++PS FEP GL Q+ AMRYGT+PIV  TGGL D+V
Sbjct:  200 INWLKGGINYADLVSTVSPSYAKEIQTPAF-GEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKNLA-GKAKDKKALQDEMHLP-KRTDPLFAMVSRLTRQKGADLLVDALENFLVQNNVQVVVLGTGDQDLEEDLSSLQDRFPGQLAVRIDFDEGLAQRIYAGADYFMMPSAFEPSGLAQMMAMRYGTLPIVHETGGLRDSV 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_LACC3 (Glycogen synthase OS=Lactobacillus casei (strain ATCC 334) GN=glgA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            INW+K GI  +D+V TVSP YA+E+ +    G  LD  +RK   K  GI+NG+D + +NP TD+ +   YDA  +   K   K+ALQ E+ LP  R  P+   + RL  QKG+D+L  A+ +F ++ NVQ++VLGTG + +E+ L  L+  +P +      F+  LA  I AGAD+ ++PS FEP GL Q+ AMRYGT+PIV  TGGL D+V
Sbjct:  200 INWLKGGINYADLVSTVSPSYAKEIQTPAF-GEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKNLA-GKAKDKKALQDEMHLP-KRTDPLFAMVSRLTRQKGADLLVDALENFLVQNNVQVVVLGTGDQDLEEDLSSLQDRFPGQLAVRIDFDEGLAQRIYAGADYFMMPSAFEPSGLAQMMAMRYGTLPIVHETGGLRDSV 408          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BACSU (Glycogen synthase OS=Bacillus subtilis GN=glgA PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40
Identity = 89/212 (41.98%), Postives = 133/212 (62.74%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +N+MKAGI+ +D V TVSP Y  E+++    G +L+ ++  R+  + GI+NG+D   + P +D YI  +YD+  +   K   K  LQ  +GLP   +IP+I  + RL +QKG D++   +   ++E ++Q++VLGTG++  E      E  + EK R    F+ PLAH I AG+D  L+PS+FEPCGL QL A++YG +PIV  TGGL DTV
Sbjct:  198 VNFMKAGIIAADHVTTVSPTYRNEIMTPY-YGEQLEQVLQYREDDVTGILNGIDDTFYQPKSDPYIEAQYDSGDLA-CKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTV 407          
BLAST of FC868653 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.839e-40
Identity = 88/211 (41.71%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   23 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 649
            +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++R  +  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E++Q++VLGTG    E+   Q+   YP K      F+ PLAH I AGAD  LIPS FEPCGL Q+ A+RYGT+PIV  TGGL DTV
Sbjct:  198 VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTGDWRFEQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLIPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTV 406          
The following BLAST results are available for this feature:
BLAST of FC868653 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_ELUMP2.326e-4039.91Glycogen synthase OS=Elusimicrobium minutum (strai... [more]
GLGA2_GEOSL3.968e-4041.70Glycogen synthase 2 OS=Geobacter sulfurreducens GN... [more]
GLGA2_GEOMG5.182e-4041.45Glycogen synthase 2 OS=Geobacter metallireducens (... [more]
GLGA_RHOPT6.768e-4042.25Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_RHOPA6.768e-4042.25Glycogen synthase OS=Rhodopseudomonas palustris GN... [more]
GLGA_PETMO6.768e-4043.46Glycogen synthase OS=Petrotoga mobilis (strain DSM... [more]
GLGA_LACCB8.839e-4044.81Glycogen synthase OS=Lactobacillus casei (strain B... [more]
GLGA_LACC38.839e-4044.81Glycogen synthase OS=Lactobacillus casei (strain A... [more]
GLGA_BACSU8.839e-4041.98Glycogen synthase OS=Bacillus subtilis GN=glgA PE=... [more]
GLGA_BACST8.839e-4041.71Glycogen synthase OS=Bacillus stearothermophilus G... [more]

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Properties
Property NameValue
Genbank descriptionC31003B03EF AbioticL1 Citrus clementina cDNA clone C31003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868653 ID=FC868653; Name=FC868653; organism=Citrus clementina; type=EST; length=713bp
ATAAACCTGTGAGAGGATCAAAATCAACTGGATGAAAGCTGGAATATTAG
AATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTT
TCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGG
CATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGA
CTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCG
AAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGA
TAGAAATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAG
GCTCAGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTT
CAGATAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGA
ACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCA
ATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATT
CCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTA
TGGAACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGG
CAGAAGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAG
GCTGTGGATCCAG
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