FC868656

Overview
NameFC868656
Unique NameFC868656
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 4.198e-90
Identity = 169/237 (71.31%), Postives = 196/237 (82.70%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR++ D  +  DMK WPFKV++    KP IGV YKGE K+FA EEISSMVL KM+E AEAYLG +I +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDK      E+NVLIFDLGGGTFDVS+LTI+EG +FEV++TAGDTHLGGEDFDNR+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+ G DF   ++
Sbjct:   63 TVFDAKRLIGRKYDDPKIAEDMKHWPFKVVSD-GGKPKIGVEYKGESKRFAPEEISSMVLTKMKETAEAYLGESITDAVITVPAYFNDSQRQATKDAGHIAGLNVLRIINEPTAAALAYGLDKNLKD--ERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVS 296          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 330.102 bits (845), Expect = 7.161e-90
Identity = 174/237 (73.42%), Postives = 193/237 (81.43%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F+D+ VQ DMK WPFKV     DKPMI V Y+GEEK F  EEISSMVL+KM+E AEAYLG  +K AVVTVPAYFNDSQRQATKDAG IAGL V+RIINEPT  AIAYGLD K     E+NVLIFDLGGGTFDVSLLTI+ GIFEVKAT GDTHLGGEDFDNR+V  F +EFKRKNK K+++ + RALR LRTACERAKRTLSS  Q TIEID+L+  +DF  TIT
Sbjct:   66 TVFDAKRLIGRKFNDSVVQSDMKHWPFKVTTKGDDKPMIAVQYRGEEKTFTPEEISSMVLLKMKETAEAYLGKQVKKAVVTVPAYFNDSQRQATKDAGTIAGLEVLRIINEPT-RAIAYGLD-KGDDGKERNVLIFDLGGGTFDVSLLTIDGGIFEVKATNGDTHLGGEDFDNRLVTFFTEEFKRKNKGKNLASSHRALRGLRTACERAKRTLSSATQATIEIDALFENVDFQATIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 326.25 bits (835), Expect = 1.034e-88
Identity = 174/236 (73.73%), Postives = 196/236 (83.05%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR+F D  VQ DMK WPF+VI    DKP + V+YKGE K F  EEISSMVL KM+EIAEA LG  + NAV+TVPAYFNDSQRQATKDAGVIAGLNV+RIINEPT   IAY LD+  T  GE+NVLIFDLGGGTFDVS+LTI++GIFEVKATAGDT    EDFDNR+VNHFV+EFKRK+KKDIS N RA+RRLRTACERAKRTLSS+ Q ++EIDSL+ GIDF  +IT
Sbjct:   66 TVFDAKRLIGRKFGDPVVQSDMKHWPFQVI-NDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEADLGYPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPT-RTIAYALDR--TGKGERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDT-TWVEDFDNRLVNHFVEEFKRKHKKDISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSIT 296          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP75_SCHPO (Heat shock protein sks2 OS=Schizosaccharomyces pombe GN=sks2 PE=1 SV=2)

HSP 1 Score: 322.013 bits (824), Expect = 1.950e-87
Identity = 168/236 (71.19%), Postives = 190/236 (80.51%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGRR+ D   Q D+K WPFKVI      P I VNY GE+KQF A+EIS+MVL KM+EI+EA L   ++ AV+TVPAYF+DSQR ATKDAG IAGLNV+RIINEPTAAAIAYGLD K+     KNVLIFDLGGGTFDVSLL I+ G+FEV ATAGDTHLGGEDFDN +V HF+QEFKRK K DIS +PRALRRLR+ACERAKR LSS  QTT+E+DSL  GIDF  +IT
Sbjct:   68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGI-PTIEVNYLGEKKQFTAQEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEPTAAAIAYGLDAKSDK--PKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVTQTTVEVDSLSNGIDFSSSIT 300          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_CERCA (Heat shock protein 70 OS=Ceratitis capitata PE=2 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.411e-87
Identity = 166/237 (70.04%), Postives = 194/237 (81.86%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGR++ D  +  D+K WPFKV++    KP I V YK E KQFA EEISSMVL KM+E AE  LG+T+ +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA+AYGLDK     GE+NVLIFDLGGGTFDVS+LTI+EG +FEV+ATAGDTHL GEDFDNR+V+H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+ GID    ++
Sbjct:   63 TVFDAKRLIGRKYDDPKIMEDVKHWPFKVVSD-GGKPKISVEYKEENKQFAPEEISSMVLTKMKETAEVILGTTVTDAVITVPAYFNDSQRQATKDAGRIAGLNVLRIINEPTAAALAYGLDKNLK--GERNVLIFDLGGGTFDVSILTIDEGSLFEVRATAGDTHL-GEDFDNRLVSHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGIDLYTKVS 295          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP72_PARLI (Heat shock 70 kDa protein II (Fragment) OS=Paracentrotus lividus GN=HSP70II PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.678e-87
Identity = 166/234 (70.94%), Postives = 194/234 (82.91%), Query Frame = 3
Query:   12 DAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGS-TIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            DAK LIGR FSD +V+ DMK WPF VI     +P I + +KGE K F AEEISSMVL+KM+E AEAYLG  ++ +AVVTVPAYFNDSQRQATK+ GVI+G+N++RIINEPTAAAIAYGLDKK  +  E+NVLIFDL GGTFDVS+LTIEEGIFEVK+T+ DTHLGGEDFDNRMV H   EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q  IEIDSL+ GID+  ++T
Sbjct:   68 DAKRLIGRNFSDTNVKADMKHWPFTVIE-EGGRPKIKIEFKGESKTFYAEEISSMVLLKMKETAEAYLGKESVTDAVVTVPAYFNDSQRQATKECGVISGMNILRIINEPTAAAIAYGLDKKGGA--ERNVLIFDLVGGTFDVSVLTIEEGIFEVKSTSRDTHLGGEDFDNRMVTHSSPEFKRKHKKDITPNKRAVRRLRTACERAKRTLSSSTQAKIEIDSLFEGIDYYTSVT 298          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP75_KLULA (Heat shock protein SSB OS=Kluyveromyces lactis GN=SSB PE=3 SV=3)

HSP 1 Score: 310.071 bits (793), Expect = 7.669e-84
Identity = 163/236 (69.07%), Postives = 188/236 (79.66%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGRRF + SVQ DMK WPFKVI    D P+I V Y GE K F+ +EISSMVL KM+EIAEA +G  ++ AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL     S  E++VLIFDLGGGTFDVSLL I  G++ VK+T+G+THLGG+DFD  ++ HF  EFK+K   DISG+ RALRRLRTA ERAKRTLSS AQTT+E+DSL+ G DF  TIT
Sbjct:   68 TVFDAKRLIGRRFDEESVQSDMKTWPFKVIDSN-DAPLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGA-GKSDKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKTEFKKKTGLDISGDARALRRLRTAAERAKRTLSSVAQTTVEVDSLFDGEDFEATIT 301          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP70_MIMIV (Heat shock 70 kDa protein homolog OS=Acanthamoeba polyphaga mimivirus GN=HSP70 PE=3 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.231e-83
Identity = 154/236 (65.25%), Postives = 193/236 (81.78%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            T+FDAK LIGR F+D SVQ DMK WPFKVI    +KP   V+Y+ E KQ++ E+ISSM+L KM++ A AY+G  + +AV+TVPAYFNDSQRQATKDAG IAGLNV+RIINEPTAAA AYGLDK      E NVLIFD+GGGT DV+LL++E+G+F+V+AT+G+T LGGEDFDNR+V   V++FKRK K D++ + +ALRRLRTACERAKR LSS+ QTTIE+DSL+ GID+ +T+T
Sbjct:   66 TIFDAKRLIGRDFNDQSVQSDMKYWPFKVI-NVGNKPYFEVSYQNESKQYSPEQISSMILSKMKQTASAYIGKEVTDAVITVPAYFNDSQRQATKDAGRIAGLNVLRIINEPTAAAFAYGLDKNQDK--EMNVLIFDMGGGTHDVTLLSLEDGLFQVRATSGNTKLGGEDFDNRLVTWCVEDFKRKYKTDLNQSAKALRRLRTACERAKRALSSSTQTTIEVDSLFEGIDYNVTLT 298          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP75_KLUMA (Heat shock protein SSB OS=Kluyveromyces marxianus GN=SSB PE=3 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 3.806e-83
Identity = 161/236 (68.22%), Postives = 187/236 (79.24%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGRRF + SVQ DMK WPFKVI      P+I V Y GE K F+ +EISSMVL KM+EIAEA +G  ++ AVVTVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYG+     S  E++VLIFDLGGGTFDVSLL I  G++ VK+T+G+THLGG+DFD  ++ HF  EFK+K   DISG+ RALRRLRTA ERAKRTLSS AQTT+E+DSL+ G DF  TIT
Sbjct:   68 TVFDAKRLIGRRFDEESVQSDMKTWPFKVIDSNG-APLIEVEYLGETKTFSPQEISSMVLTKMKEIAEAKIGKKVEKAVVTVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGVGA-GNSEKERHVLIFDLGGGTFDVSLLHIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKTEFKKKTGADISGDARALRRLRTAAERAKRTLSSVAQTTVEVDSLFDGEDFEATIT 301          
BLAST of FC868656 vs. ExPASy Swiss-Prot
Match: HSP75_ASHGO (Heat shock protein SSB OS=Ashbya gossypii GN=SSB PE=3 SV=3)

HSP 1 Score: 307.76 bits (787), Expect = 3.806e-83
Identity = 160/236 (67.80%), Postives = 186/236 (78.81%), Query Frame = 3
Query:    3 TVFDAKSLIGRRFSDASVQGDMKLWPFKVIAGPADKPMIGVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYXGIDFLLTIT 710
            TVFDAK LIGRRF D SVQ DMK WPFKVI      PMI V Y GE K F+ +EIS+MVL KM+EIAEA +G  ++ AV+TVPAYFND+QRQATKDAG IAGLNV+RIINEPTAAAIAYGL     S  E++VLIFDLGGGTFDVSLL I  G++ VK+T+G+THLGG+DFD  ++ HF  EFK+K   DISG+ RALRRLRTA ERAKRTLSS  QTT+E+DSL+ G DF  +IT
Sbjct:   68 TVFDAKRLIGRRFDDESVQSDMKTWPFKVIDANGS-PMIEVEYLGETKSFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGA-GKSEKERHVLIFDLGGGTFDVSLLNIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISGDARALRRLRTAAERAKRTLSSVTQTTVEVDSLFEGEDFETSIT 301          
The following BLAST results are available for this feature:
BLAST of FC868656 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP74_DROME4.198e-9071.31Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]
HSP70_LEIDO7.161e-9073.42Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP71_CERAE1.034e-8873.73Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP75_SCHPO1.950e-8771.19Heat shock protein sks2 OS=Schizosaccharomyces pom... [more]
HSP70_CERCA7.411e-8770.04Heat shock protein 70 OS=Ceratitis capitata PE=2 S... [more]
HSP72_PARLI9.678e-8770.94Heat shock 70 kDa protein II (Fragment) OS=Paracen... [more]
HSP75_KLULA7.669e-8469.07Heat shock protein SSB OS=Kluyveromyces lactis GN=... [more]
HSP70_MIMIV2.231e-8365.25Heat shock 70 kDa protein homolog OS=Acanthamoeba ... [more]
HSP75_KLUMA3.806e-8368.22Heat shock protein SSB OS=Kluyveromyces marxianus ... [more]
HSP75_ASHGO3.806e-8367.80Heat shock protein SSB OS=Ashbya gossypii GN=SSB P... [more]

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Properties
Property NameValue
Genbank descriptionC31003B06EF AbioticL1 Citrus clementina cDNA clone C31003B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868656 ID=FC868656; Name=FC868656; organism=Citrus clementina; type=EST; length=710bp
ACACCGTCTTTGATGCAAAGAGCTTGATTGGTAGGAGATTCAGCGATGCA
TCAGTCCAAGGAGATATGAAGCTATGGCCATTTAAGGTGATTGCTGGACC
AGCTGACAAGCCCATGATTGGTGTTAACTACAAGGGCGAAGAGAAGCAGT
TTGCTGCTGAGGAAATCTCGTCTATGGTGCTCATCAAGATGCGTGAGATT
GCCGAGGCTTACCTTGGCTCAACTATTAAGAATGCAGTCGTTACTGTCCC
TGCTTACTTCAATGACTCACAGAGGCAGGCCACCAAGGATGCTGGTGTCA
TTGCTGGGCTTAATGTGATGCGTATCATCAATGAGCCCACTGCTGCTGCC
ATTGCTTATGGCCTTGACAAGAAGGCTACTAGTGTGGGTGAGAAGAATGT
GTTGATCTTTGATTTGGGTGGTGGTACTTTTGATGTGTCGTTGCTCACTA
TTGAGGAGGGAATCTTTGAAGTGAAGGCTACTGCTGGAGACACTCATCTT
GGTGGTGAGGATTTTGATAACAGAATGGTGAATCATTTTGTTCAGGAGTT
TAAGAGGAAGAACAAGAAGGATATTAGTGGCAACCCTAGAGCTCTTAGGA
GATTGAGGACTGCTTGTGAGAGAGCGAAGAGGACTCTCTCCTCTACTGCC
CAGACTACAATTGAGATTGATTCTTTGTATGANGGTATTGACTTTCTACT
CACCATAACT
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