FC868658

Overview
NameFC868658
Unique NameFC868658
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAN (Aminomethyltransferase OS=Staphylococcus aureus (strain N315) GN=gcvT PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAM (Aminomethyltransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gcvT PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAE (Aminomethyltransferase OS=Staphylococcus aureus (strain Newman) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAAC (Aminomethyltransferase OS=Staphylococcus aureus (strain COL) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAA9 (Aminomethyltransferase OS=Staphylococcus aureus (strain JH9) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAA8 (Aminomethyltransferase OS=Staphylococcus aureus (strain NCTC 8325) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAA3 (Aminomethyltransferase OS=Staphylococcus aureus (strain USA300) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAA2 (Aminomethyltransferase OS=Staphylococcus aureus (strain JH1) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STAA1 (Aminomethyltransferase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 63/159 (39.62%), Postives = 86/159 (54.09%), Query Frame = 2
Query:  209 AENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            + +LK+T L+  +V  G K+V F GW+MP+Q+  SI E     R    LFDVSHM  + + GKD   F++ L+  D   L       T   NE GG IDD VI K+ DD+  LVVNA   +KD   I  H + F  +  +VS    ++   LA+QGP A
Sbjct:    2 SSDLKQTPLYQNYVDRGAKIVEFGGWAMPVQFS-SIKEEHNAVRYEIGLFDVSHMGEIEVTGKDASQFVQYLLSNDTDNLTTSKALYTALCNEEGGIIDDLVIYKLADDNYLLVVNAANTEKDFNWILKHKEKFDVEVQNVS----NQYGQLAIQGPKA 155          
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PROMH (Aminomethyltransferase OS=Proteus mirabilis (strain HI4320) GN=gcvT PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.019e-21
Identity = 64/156 (41.03%), Postives = 84/156 (53.85%), Query Frame = 2
Query:  221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685
            K+T L+D HVA G +MV F GW MP+ Y   I E   N RQ+  +FDVSHM  + L G     FL  L+  DVA L   G    T   N +GG IDD ++    +    LVVN+  R+KDLA I  H K +      V   + D+ +L+A+QGP A
Sbjct:    3 KQTPLYDEHVACGARMVDFHGWMMPLHYGSQIDEHH-NVRQDAGMFDVSHMTIVDLHGPQVKDFLRYLLANDVAKLTEKGKALYTGMLNASGGVIDDLIVYYFDETFYRLVVNSATREKDLAWITEHAKDYV-----VDIQVRDDLALIAVQGPHA 152          
The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 330
Match NameE-valueIdentityDescription
GCST_STAAN1.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAM1.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAE1.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAAC1.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA91.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA81.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA31.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA21.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_STAA11.019e-2139.62Aminomethyltransferase OS=Staphylococcus aureus (s... [more]
GCST_PROMH1.019e-2141.03Aminomethyltransferase OS=Proteus mirabilis (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31003B08EF AbioticL1 Citrus clementina cDNA clone C31003B08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bp
GNAGCACCGCTCTCTCTGTGTATTCCTGGAGATGCTCTTTCGGGCTCCCA
GATTTGCTTGTTTCTGAGATAAAGAAGAAAACCCCATCTCTATATTTATA
TCGAATAAAATGAGAGGAGGGAGTCTGTGGCAGCTTGGACAATCGATCAC
CCGTCGTTTGGCTCTGGCTGATAAGAAGACTATAGCTCGTAGACACTTTG
CCTCAGATGCTGAAAACCTGAAAAAAACTGCCCTTCATGACTTTCATGTG
GCTAATGGTGGAAAGATGGTTCCATTTGCTGGATGGAGCATGCCTATTCA
GTACAAGGACTCAATTATGGAATCTACTTTGAATTGTCGGCAGAATGGTA
GTCTCTTTGATGTCTCCCATATGTGTGGGCTGAGCCTCAAAGGGAAGGAT
TGCGTCCCTTTCCTTGAGAAGCTTGTGATCGCTGATGTTGCTGGACTTGC
CCCAGGAACTGGGACTCTTACAGTCTTTACAAATGAAAATGGGGGTTCAA
TTGATGATTCGGTTATTACCAAGGTGAAGGATGATCACATATACCTTGTT
GTGAATGCTGGCTGCAGGGATAAGGATCTTGCTCACATTGAGGCACATAT
GAAGAGTTTCACAGCCAAAGGTGGGGATGTCTCGTGGCACATCCATGATG
AGAGATCTCTTCTTGCCCTTCAGGGCCCCCTTGCT
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