FC868658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PHOLL (Aminomethyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=gcvT PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 59/154 (38.31%), Postives = 86/154 (55.84%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAP-GTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGP 679 K+T L+D H+A G +MV F GW MP+ Y + E + R + +FDVSHM + L G C FL L+ D+A L G T N +GG IDD ++ + +D LVVN+ R+KDLA I H+ ++ V + D+ +L+A+QGP Sbjct: 3 KQTPLYDQHLACGARMVDFHGWMMPLHYGSQMDEHHI-VRTHAGMFDVSHMTIVDLHGTGCRDFLRYLLANDIAKLTEKGKALYTGMLNASGGVIDDLIVYYLSNDFYRLVVNSATREKDLAWINEHVANY-----PVDIQVRDDLALIAVQGP 150
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_DEIDV (Aminomethyltransferase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 59/156 (37.82%), Postives = 83/156 (53.21%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LK+T LH H+ G +MVPF GW MP+QY E R++ +FDVSHM ++G+ + FL+ + DV+ L PG N+ GG +DD I V ++ +VVNA DKD AH++ F G + D +LLA+QGP A Sbjct: 9 LKRTPLHAAHLRAGARMVPFGGWDMPVQYSGLKAEHQA-VRESAGVFDVSHMGEFRIQGEGALAFLQHVTPNDVSKLRPGRAQYNWLPNDRGGLVDDIYIYMVGENEYLMVVNASNIDKDWAHLQTLAAGF----GVTLTNESDRWALLAVQGPKA 159
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BACSU (Aminomethyltransferase OS=Bacillus subtilis GN=gcvT PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 60/157 (38.22%), Postives = 88/157 (56.05%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSW-HIHDERSLLALQGPLA 685 LK+T L D + GGK + F GW +P+Q+ SI + R LFDVSHM + + G D + FL++L+ DV+ L PG T +GG++DD +I + ++ LV+NA DKDLA ++ H GDV + D+ +LLA+QGP A Sbjct: 2 LKRTPLFDLYKEYGGKTIDFGGWELPVQFS-SIKKEHEAVRTAAGLFDVSHMGEVEVSGNDSLSFLQRLMTNDVSALTPGRAQYTAMCYPDGGTVDDLLIYQKGENRYLLVINASNIDKDLAWMKEH------AAGDVQIDNQSDQIALLAVQGPKA 151
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BACP2 (Aminomethyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=gcvT PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.965e-21 Identity = 57/156 (36.54%), Postives = 88/156 (56.41%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LK+T L + G K + F GW +P+Q+ SI E R LFDVSHM + +KG+D +PFL++L+ DV+ L G T E+GG++DD ++ + + + LV+NA +KD+ + H + + ++ DE +LLALQGPLA Sbjct: 2 LKRTPLFHAYETFGAKTIDFGGWELPVQFS-SIKEEHEAVRTKAGLFDVSHMGEVEIKGQDALPFLQRLLTNDVSKLTDGKALYTAMCYEDGGTVDDLLVYQKEKNDYLLVINASNIEKDVEWLLQHQ----GENDVLIQNVSDEIALLALQGPLA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_STRMK (Aminomethyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=gcvT PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 63/156 (40.38%), Postives = 84/156 (53.85%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGL-APGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 +KT L+D H A G KMV F GW MPI Y + E L R++G +FDVSHM + L+G PFL +L+ V L PG + N GG IDD ++ + DD +VVNA R+KDLA + F VS + ++LA+QGP A Sbjct: 3 QKTLLNDTHRALGAKMVDFGGWDMPIHYGSQLDEHHLVRRESG-VFDVSHMTVVDLRGDQVRPFLRRLLANSVDKLKVPGKALYSCMLNPRGGVIDDLIVYYLGDDFFRMVVNASTREKDLAWLREQAAPF-----GVSVEQRPDLAILAVQGPQA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_PECCP (Aminomethyltransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvT PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 62/156 (39.74%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 221 KKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 K+T L+ H+A+G KMV F GW MP+ Y + E + R+ G +FDVSHM + L G FL L+ DVA L PG T N +GG IDD ++ + +D+ LVVN+ R+KDLA IE H F + ++ +L+A+QGP A Sbjct: 3 KQTPLYQQHLADGAKMVDFHGWMMPLHYGSQLDEHHIVRREAG-IFDVSHMTIVDLHGARTREFLRYLLANDVAKLTQPGKALYTGMLNASGGVIDDLIVYFLTEDYFRLVVNSATREKDLAWIEQHAAPF-----GIEIREREDLALVAVQGPQA 152
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_DESRM (Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=gcvT PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21 Identity = 58/158 (36.71%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 212 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 + LK+T L++ H+A G KMV F GW MP+QY+ I E R LFDVSHM + + G F+++LV D++ L PG + N GG++DD ++ +++D LVVNA DKD I + G ++ ++ + LALQGP A Sbjct: 2 QELKRTPLYNIHLAAGAKMVEFGGWLMPVQYEGIIAEHQA-VRSAAGLFDVSHMGEIQISGPTAREFVQRLVTNDISRLKPGCAIYSPMCNPQGGTVDDLLVYQLEDQQYLLVVNASNTDKDFHWIVSQQ----VPGVEIQ-NVSEVTCQLALQGPQA 153
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CLOBL (Aminomethyltransferase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 212 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 E+LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + GKD F++ L+ D+ L T NE+GG IDD ++ K D +LV+NA +DKD+ I H F + DVS D + LA QGPLA Sbjct: 2 EDLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAGDEFFLVINASNKDKDVKWIMGHKGDFDVEIVDVS----DSIAQLAFQGPLA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_CLOBJ (Aminomethyltransferase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=gcvT PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 62/158 (39.24%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 212 ENLKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLAPGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 E LK T L + GGK+V FAG+ +P Q+K + E R+ LFDVSHM + GKD F++ L+ D+ L T NE+GG IDD ++ K +D +LV+NA +DKD+ I H F + DVS D + LA QGPLA Sbjct: 2 EGLKVTPLRGVYEEYGGKIVDFAGYELPTQFKGFLHEHH-TVREKAGLFDVSHMGEAMVTGKDAGKFIQYLMTNDINVLKDNEVLYTFMCNEDGGVIDDLLVYKFAEDEFFLVINASNKDKDVKWIMDHKGDFDVEIVDVS----DSIAQLAFQGPLA 154
BLAST of FC868658 vs. ExPASy Swiss-Prot
Match: GCST_BORPE (Aminomethyltransferase OS=Bordetella pertussis GN=gcvT PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 218 LKKTALHDFHVANGGKMVPFAGWSMPIQYKDSIMESTLNCRQNGSLFDVSHMCGLSLKGKDCVPFLEKLVIADVAGLA-PGTGTLTVFTNENGGSIDDSVITKVKDDHIYLVVNAGCRDKDLAHIEAHMKSFTAKGGDVSWHIHDERSLLALQGPLA 685 LK+T L + H+A G MV F GW MP+ Y S +E RQ+ +FDVSHM + + G D FL +LV DVA LA PG + N GG IDD +I D +VVNAG DKD+A ++ + A G DV + +++A+QGP A Sbjct: 5 LKRTPLAEEHLAAGACMVDFGGWDMPLAY-GSQLEEHHAVRQDAGMFDVSHMLNVDVGGADATAFLRRLVANDVARLATPGKALYSCMLNPQGGIIDDLIIYYFAPDQWRVVVNAGTADKDIAWMQ---RVAAADGFDVVIAPRRDLAMVAVQGPNA 157 The following BLAST results are available for this feature:
BLAST of FC868658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868658 ID=FC868658; Name=FC868658; organism=Citrus clementina; type=EST; length=685bpback to top |