FC868662

Overview
NameFC868662
Unique NameFC868662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_RHIFE (Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 3
Query:  321 LLAAICMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            LL+ + +  C      +         L+   L +  L  ++IN A    K         P      L NY+D +Y+G IGIG+PPQ F+V+FDTGSSNLWVPS  C
Sbjct:    6 LLSLVALSECYIYKVPLVKKKSLRKNLMEQGLLQDYLKTHSINPASKYLKEAASMMATQP------LENYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC 105          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 40/105 (38.10%), Postives = 54/105 (51.43%), Query Frame = 3
Query:  324 LAAICMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            L+   ++  P +           HGLL+  LKK     N   A++   + E     +        L NYLD +Y+G IGIG+P Q F+V+FDTGSSNLWVPS  C
Sbjct:   12 LSECIIYKVPLVRKKSLRRNLSEHGLLKDFLKKH----NRNPASKYFPQTEAPTLIDEQP-----LENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC 107          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 40/105 (38.10%), Postives = 54/105 (51.43%), Query Frame = 3
Query:  324 LAAICMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            L+   ++  P +           HGLL+  LKK  L      A++   + E     +        L NYLD +Y+G IGIG+P Q F+V+FDTGSSNLWVPS  C
Sbjct:   12 LSECIIYKVPLVRKKSLRRNLSEHGLLKDFLKKHNLN----PASKYFPQAEAPTLIDEQP-----LENYLDVEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC 107          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CATE_HUMAN (Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.822e-11
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 3
Query:  519 LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            L NYLD +Y+G I IGSPPQ+F+V+FDTGSSNLWVPS  C
Sbjct:   70 LINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC 109          

HSP 2 Score: 21.9422 bits (45), Expect = 1.822e-11
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  644 SISCYLHSRYRARLSRTYTKIG 709
            S +C  HSR++   S TY++ G
Sbjct:  111 SPACKTHSRFQPSQSSTYSQPG 132          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CATEA_XENLA (Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 35/92 (38.04%), Postives = 59/92 (64.13%), Query Frame = 3
Query:  393 HGLLRIQLKKRQLGINTINA----ARLITKNEVH-----NRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL 641
            +GL+R+ LK+++    T+      + + T+  +      +  ++ +A    L NY+D +Y+GEI +G+PPQ+F+V+FDTGSSNLWVPS  C+
Sbjct:   15 YGLIRVPLKRQKSIRKTLKEKGKLSHIWTQQGIDMVQYTDSCSNDQAPSEPLINYMDVEYFGEISVGTPPQNFTVIFDTGSSNLWVPSVYCI 106          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  288 RKICVRMGIKFLLAAICMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            +K+ + +G+  L  + C++  P +           +GLL+  L K     N   A++           + P      L NY+D +Y+G IGIG+PPQ F+V+FDTGSSNLWVPS  C
Sbjct:    2 KKLLLLLGLVAL--SECLYKVPLVKKKSLRQNLIENGLLKDFLAKH----NVNPASKYFPTEAATELADQP------LVNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC 106          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 45/106 (42.45%), Postives = 55/106 (51.89%), Query Frame = 3
Query:  324 LAAICMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPK-ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            L+   M+  P I            GLL+  LKK  L     N AR     +   ++  P   D   L NYLD +Y+G IGIG+P Q F+VVFDTGSSNLWVPS  C
Sbjct:   12 LSECIMYKVPLIRKKSLRRTLSERGLLKDFLKKHNL-----NPAR-----KYFPQWEAPTLVDEQPLENYLDMEYFGTIGIGTPAQDFTVVFDTGSSNLWVPSVYC 107          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CATE_MOUSE (Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 3
Query:  438 NTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            + ++  RL     V++  N P      L NYLD +Y+G I IG+PPQ+F+V+FDTGSSNLWVPS  C
Sbjct:   50 HNLDMTRLSESCNVYSSVNEP------LINYLDMEYFGTISIGTPPQNFTVIFDTGSSNLWVPSVYC 110          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 28/40 (70.00%), Postives = 34/40 (85.00%), Query Frame = 3
Query:  519 LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            L NY+D +Y+G IGIG+PPQ F+V+FDTGSSNLWVPS  C
Sbjct:   66 LKNYMDMEYFGTIGIGTPPQEFTVIFDTGSSNLWVPSVYC 105          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = 3
Query:  396 GLLRIQLKKRQLGINTINAARLIT---KNEVH----NRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            G++RI L K +     +    L+    KN  H       N  +    +L NYLD QY+G+I IG+PPQ F+VVFDTGSS+LWVPS  C
Sbjct:   18 GIVRIPLHKGKSLRRALKERGLLEDFLKNHQHAVSRKHSNSREVASEFLTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYC 105          
The following BLAST results are available for this feature:
BLAST of FC868662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PEPA_RHIFE1.406e-1136.79Pepsin A OS=Rhinolophus ferrumequinum GN=PGA PE=2 ... [more]
PEPA_MACMU1.406e-1138.10Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA1_MACFU1.406e-1138.10Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CATE_HUMAN1.822e-1172.50Cathepsin E OS=Homo sapiens GN=CTSE PE=1 SV=2[more]
CATEA_XENLA1.836e-1138.04Cathepsin E-A OS=Xenopus laevis GN=ctse-A PE=1 SV=... [more]
PEPA_SUNMU2.398e-1135.04Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2[more]
PEPA_HUMAN2.398e-1142.45Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
CATE_MOUSE2.398e-1149.25Cathepsin E OS=Mus musculus GN=Ctse PE=1 SV=1[more]
PEPA_CANFA3.132e-1170.00Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
CHYM_CALJA3.132e-1144.32Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31003B12EF AbioticL1 Citrus clementina cDNA clone C31003B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868662 ID=FC868662; Name=FC868662; organism=Citrus clementina; type=EST; length=736bp
GATTACGAAACCACGGTAGTGAGACTATTCACTGAAACAAATAAATAAAC
TTACTTGTTCAATAATTAATCTATCTAAACTATAAACGAATAAAATTATT
TTGTCAATGACTCACTGATCTCCAAGTACAACGCGGGAAGAGAAATTGCG
CAGTGGTTTCCTGAGCATTTAATCACACCCACACGAAACAAGCTCACAGA
TGATTCACTACAGGGTGCAAACATAAAAAGGCAGGCCAGGCAGCTCGTTG
GTTCGTTCGTTGATTGGCGCCATATCATCAACTCAGCAGGAAAATTTGTG
TAAGAATGGGGATTAAGTTTCTTCTTGCTGCAATATGTATGTGGGTTTGC
CCCTGCATCTTAGCCTCGATGCCTCCTCCTCCTCCTCCTTCTCATGGGTT
ACTGAGGATTCAACTGAAGAAGCGGCAGTTAGGCATTAACACCATCAACG
CTGCAAGGTTAATCACTAAAAACGAGGTTCACAATCGTTTCAATCATCCT
AAAGCAGATGTAGTTTATTTAAACAACTATCTTGATGCCCAATATTATGG
AGAGATTGGTATTGGTTCACCTCCACAAAGTTTCTCTGTCGTCTTTGATA
CTGGCAGCTCTAATCTTTGGGTCCCATCTTCTAAATGCCTTTTTCTATAT
CTTGCTATTTACATTCGAGATACAGGGCGAGGCTGTCCAGGACTTATACT
AAGATTGGAGTACCTTGCAAATTCATTATGGCTCTG
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