FC868662

Overview
NameFC868662
Unique NameFC868662
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CARDF_CYNCA (Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 3
Query:  510 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFLY 650
            VV L N  D  YYGEIGIG+PPQ F+V+FDTGSS LWVPSSK   +Y
Sbjct:    7 VVALTNDRDTSYYGEIGIGTPPQKFTVIFDTGSSVLWVPSSKAHSMY 53          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = 3
Query:  390 SHGLLRIQL-KKRQLGINTINAARL--ITKNEVHNRFNH--PKADVVY----LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            S  L+++ L +K+ L  N I   +L    K   HN  +   P+A  +     L NYLD +Y+G IGIG+P Q F+V+FDTGSSNLWVPS  C
Sbjct:   13 SECLVKVPLVRKKSLRQNLIKNGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC 104          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  393 HGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            HGLL   L+K+Q GI++            ++ F    +  V L NYLD+QY+G+I +G+PPQ F+V+FDTGSS+ WVPS  C
Sbjct:   37 HGLLEDFLQKQQYGISS-----------KYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYC 105          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CARPV_CANAL (Vacuolar aspartic protease OS=Candida albicans GN=APR1 PE=3 SV=3)

HSP 1 Score: 64.6994 bits (156), Expect = 5.166e-11
Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 3
Query:  459 LITKNEVHNRFNHPKADVVY---LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFL 647
            ++T  E    F  PK    Y   L NYL+AQY+ EI IG+P Q F V+ DTGSSNLWVPS  C  L
Sbjct:   73 VLTNQEAEVPFVTPKKGGKYDAPLTNYLNAQYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDCTSL 138          

HSP 2 Score: 23.483 bits (49), Expect = 5.166e-11
Identity = 8/18 (44.44%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  644 SISCYLHSRYRARLSRTY 697
            S++C+LH++Y    S TY
Sbjct:  137 SLACFLHAKYDHDASSTY 154          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 42/103 (40.78%), Postives = 55/103 (53.40%), Query Frame = 3
Query:  336 CMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTIN-AARLITKNEVHNRF-NHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            C++    I           HGLL+  LK      NT++ A++   + E      N P      L NYLD +Y+G IGIG+P Q F+V+FDTGSSNLWVPS  C
Sbjct:   15 CLYKVSLIKKKSLRKNLIEHGLLKDFLKN-----NTLDPASKYFPQGEAATMIANQP------LVNYLDMEYFGTIGIGTPAQEFTVIFDTGSSNLWVPSIYC 106          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 38/82 (46.34%), Postives = 48/82 (58.54%), Query Frame = 3
Query:  393 HGLLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            HGLL+  LKK     N   A++   + E     +        L NYLD +Y+G IGIG+P Q F+V+FDTGSSNLWVPS  C
Sbjct:   35 HGLLKDFLKKH----NFNPASKYFPQAEAPTLIDEQP-----LENYLDMEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC 107          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PAG2_PIG (Pregnancy-associated glycoprotein 2 OS=Sus scrofa GN=PAG2 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 3
Query:  336 CMWVCPCILASMXXXXXXSHGLLRIQLKKRQLGINTINAARLITKNEVH-NRFNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            C+ + P              GLL+  LK+    +       L++KN  H  +F++       L NYLD  Y G I IG+PPQ FSVVFDTGSS+LWVPS  C
Sbjct:   15 CLVMIPLTKVKSVRESLREKGLLKNFLKEHPYNM----IQNLLSKNSSHVQKFSYQP-----LRNYLDMVYVGNISIGTPPQQFSVVFDTGSSDLWVPSIYC 107          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11
Identity = 36/85 (42.35%), Postives = 49/85 (57.65%), Query Frame = 3
Query:  399 LLRIQLKKRQLGINTINAARLITKNEVHNRFNHPKADVVY-----LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            L R+ L +R+     + A   +T+       N  +   +      L NYLD +Y+G I IGSPPQ+F+V+FDTGSSNLWVPS  C
Sbjct:   21 LHRVPLSRRESLRKKLRAQGQLTELWKSQNLNMDQCSTIQSANEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYC 105          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: PEPC_MONDO (Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 3
Query:  489 FNHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 638
            FN        + NYLD+ Y+GEI IG+PPQ+F V+FDTGSSNLWVPS+ C
Sbjct:   57 FNKDAVAYEPITNYLDSFYFGEISIGTPPQNFLVLFDTGSSNLWVPSTYC 106          
BLAST of FC868662 vs. ExPASy Swiss-Prot
Match: CARDG_CYNCA (Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11
Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 3
Query:  510 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFLY 650
            VV L N  D  Y+GEIGIG+PPQ F+V+FDTGSS LWVPSSK   +Y
Sbjct:    6 VVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSYLWVPSSKAHSMY 52          
The following BLAST results are available for this feature:
BLAST of FC868662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
CARDF_CYNCA3.132e-1168.09Cardosin-F (Fragments) OS=Cynara cardunculus PE=1 ... [more]
PEPA_PIG4.090e-1144.57Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
CHYM_BOVIN4.090e-1145.12Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]
CARPV_CANAL5.166e-1151.52Vacuolar aspartic protease OS=Candida albicans GN=... [more]
PEPA_CALJA5.342e-1140.78Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEPA2_MACFU5.342e-1146.34Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PAG2_PIG5.342e-1140.20Pregnancy-associated glycoprotein 2 OS=Sus scrofa ... [more]
CATE_CAVPO5.342e-1142.35Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
PEPC_MONDO6.977e-1160.00Gastricsin OS=Monodelphis domestica GN=PGC PE=2 SV... [more]
CARDG_CYNCA6.977e-1165.96Cardosin-G (Fragments) OS=Cynara cardunculus PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionC31003B12EF AbioticL1 Citrus clementina cDNA clone C31003B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868662 ID=FC868662; Name=FC868662; organism=Citrus clementina; type=EST; length=736bp
GATTACGAAACCACGGTAGTGAGACTATTCACTGAAACAAATAAATAAAC
TTACTTGTTCAATAATTAATCTATCTAAACTATAAACGAATAAAATTATT
TTGTCAATGACTCACTGATCTCCAAGTACAACGCGGGAAGAGAAATTGCG
CAGTGGTTTCCTGAGCATTTAATCACACCCACACGAAACAAGCTCACAGA
TGATTCACTACAGGGTGCAAACATAAAAAGGCAGGCCAGGCAGCTCGTTG
GTTCGTTCGTTGATTGGCGCCATATCATCAACTCAGCAGGAAAATTTGTG
TAAGAATGGGGATTAAGTTTCTTCTTGCTGCAATATGTATGTGGGTTTGC
CCCTGCATCTTAGCCTCGATGCCTCCTCCTCCTCCTCCTTCTCATGGGTT
ACTGAGGATTCAACTGAAGAAGCGGCAGTTAGGCATTAACACCATCAACG
CTGCAAGGTTAATCACTAAAAACGAGGTTCACAATCGTTTCAATCATCCT
AAAGCAGATGTAGTTTATTTAAACAACTATCTTGATGCCCAATATTATGG
AGAGATTGGTATTGGTTCACCTCCACAAAGTTTCTCTGTCGTCTTTGATA
CTGGCAGCTCTAATCTTTGGGTCCCATCTTCTAAATGCCTTTTTCTATAT
CTTGCTATTTACATTCGAGATACAGGGCGAGGCTGTCCAGGACTTATACT
AAGATTGGAGTACCTTGCAAATTCATTATGGCTCTG
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