FC868664

Overview
NameFC868664
Unique NameFC868664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.969e-19
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  277 PFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYP 391          

HSP 2 Score: 20.7866 bits (42), Expect = 1.969e-19
Identity = 6/23 (26.09%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+W +YIQ +  +       +P
Sbjct:  255 YPKWTMYIQVMTEEQAKNHKDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.969e-19
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  277 PFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYP 391          

HSP 2 Score: 20.7866 bits (42), Expect = 1.969e-19
Identity = 6/23 (26.09%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+W +YIQ +  +       +P
Sbjct:  255 YPKWTMYIQVMTEEQAKNHKDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.969e-19
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  277 PFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYP 391          

HSP 2 Score: 20.7866 bits (42), Expect = 1.969e-19
Identity = 6/23 (26.09%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+W +YIQ +  +       +P
Sbjct:  255 YPKWTMYIQVMTEEQAKNHKDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.969e-19
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W  D  PL  VG   LN+N DN+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  277 PFDLTKVWYHDEYPLIEVGEFELNRNPDNYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRVVDNNQGGGTHYYP 391          

HSP 2 Score: 20.7866 bits (42), Expect = 1.969e-19
Identity = 6/23 (26.09%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+W +YIQ +  +       +P
Sbjct:  255 YPKWTMYIQVMTEEQAKNHKDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAHJ (Catalase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=katA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.969e-19
Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W +   PL  VG   LN+N +N+F + E  AF P  ++PG+ +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M F+  ++     Y+P
Sbjct:  277 PFDLTKVWYKGDYPLIEVGEFELNRNPENYFMDVEQAAFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENMCPFSR---DGQMRFLDGNQGGGPHYYP 391          

HSP 2 Score: 23.0978 bits (48), Expect = 1.969e-19
Identity = 7/23 (30.43%), Postives = 13/23 (56.52%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+WK+YIQ +  +       +P
Sbjct:  255 YPKWKMYIQVMTEEQAKNHPDNP 277          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATB_STAXY (Catalase B OS=Staphylococcus xylosus GN=katB PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 2.562e-19
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W +   PL  VG   LN+N DN+F + E  AF P  +VPGI +S DKMLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  276 PFDLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGVENICPFSR---DGQMRILDNNQGGGTHYYP 390          

HSP 2 Score: 21.557 bits (44), Expect = 2.562e-19
Identity = 7/23 (30.43%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+WK YIQ +  +       +P
Sbjct:  254 YPKWKTYIQVMTEEQARNHKDNP 276          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CAT1_NEUCR (Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.920e-19
Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFM 366
            D TK WPED++P++ +G + LN+N D FF + E +AF    VV GI +S+D +LQ R F+Y DTQ  RLG N+  LP+N P CP  N + DG M
Sbjct:  319 DATKIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSHVVNGIGFSDDPLLQGRNFSYFDTQISRLGVNFQELPINRPVCPVMNFNRDGAM 412          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_STAS1 (Catalase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=katA PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 3.332e-19
Identity = 51/118 (43.22%), Postives = 69/118 (58.47%), Query Frame = 1
Query:   79 PTDVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPK-------CPHRNNHYDGFMNFMHRDEEVLSFYFP 411
            P D+TK W +   PL  VG   LN+N DN+F + E  AF P  +VPGI +S D+MLQ R+F+YGD QR+RLG N+  +PVN PK       CP      DG M  +  ++   + Y+P
Sbjct:  276 PFDLTKVWYKGDYPLIEVGEWELNRNPDNYFQDVEQAAFAPTNIVPGIDFSPDRMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSR---DGQMRILDNNQGGSTHYYP 390          

HSP 2 Score: 21.557 bits (44), Expect = 3.332e-19
Identity = 7/23 (30.43%), Postives = 12/23 (52.17%), Query Frame = 2
Query:   14 HPEWKLYIQTIDPDHEDQFVSDP 82
            +P+WK YIQ +  +       +P
Sbjct:  254 YPKWKTYIQVMTEEQARNHKDNP 276          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.814e-19
Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAP 327
            DVTK WP    PL PVG+LVL++N +N+F + E  AF P  +VPGI  S D+MLQ R+F+Y DT RHRLG NY  +PVN P
Sbjct:  287 DVTKVWPHGDYPLIPVGKLVLDRNPENYFQDVEQAAFAPAHMVPGIEPSEDRMLQGRMFSYIDTHRHRLGANYHQIPVNRP 367          
BLAST of FC868664 vs. ExPASy Swiss-Prot
Match: CATR_ASPNG (Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.981e-19
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 1
Query:   85 DVTKWWPEDIIPLQPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQ--RHRLGPNYLMLPVNAPKCPHRNNHYDGF 363
            D TK  PE+++P  P+G + LN N  N+FAE E   F PG VVPGI +++D +LQ R+F+Y DTQ  RH  GPN+  +PVN P+ P  NN+ DGF
Sbjct:  332 DPTKLVPEEVVPYTPLGMMELNANPTNYFAEVEQAGFQPGHVVPGIDFTDDPLLQGRLFSYLDTQLTRHG-GPNFEQIPVNRPRKPVHNNNRDGF 425          
The following BLAST results are available for this feature:
BLAST of FC868664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAAC1.969e-1943.22Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB1.969e-1943.22Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA81.969e-1943.22Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA31.969e-1943.22Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATA_STAHJ1.969e-1942.37Catalase OS=Staphylococcus haemolyticus (strain JC... [more]
CATB_STAXY2.562e-1944.07Catalase B OS=Staphylococcus xylosus GN=katB PE=3 ... [more]
CAT1_NEUCR2.920e-1948.94Catalase-1 OS=Neurospora crassa GN=cat-1 PE=1 SV=2[more]
CATA_STAS13.332e-1943.22Catalase OS=Staphylococcus saprophyticus subsp. sa... [more]
CATA_TOXGO3.814e-1956.79Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]
CATR_ASPNG4.981e-1950.53Catalase R OS=Aspergillus niger GN=catR PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31003C03EF AbioticL1 Citrus clementina cDNA clone C31003C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868664 ID=FC868664; Name=FC868664; organism=Citrus clementina; type=EST; length=702bp
TTGCAGCTGGAAACATCCTGAGTGGAAACTCTACATTCAGACTATTGATC
CCGATCACGAGGACCAATTTGTCTCTGACCCACTGACGTAACCAAGTGGT
GGCCTGAGGACATCATCCCTCTGCAGCCAGTTGGACGCTTGGTCTTGAAC
AAGAACATCGATAATTTCTTTGCGGAAAATGAAATGCTTGCATTTAACCC
TGGTATCGTGGTTCCTGGGATCTACTACTCAAATGATAAGATGCTCCAAT
GTCGAATCTTTGCCTATGGTGATACCCAGAGGCATCGCCTTGGACCCAAC
TACTTGATGCTTCCAGTTAATGCACCCAAATGTCCTCATCGCAACAATCA
TTATGATGGTTTCATGAATTTCATGCACAGGGATGAGGAGGTACTTAGTT
TCTACTTTCCCCCCTGGAAACAAAATTTATGAATCAAAATAGGCTCGGCA
CCTATAATCTATCCACATTTATCTTAACTTAGATAATGGTGCATGTCTTA
AAGATACAAGTGCTTAGTACAAGTGGATGGTATCAGAATCTAACCTGTTG
TGTGCTAGTGTTATAAAAAAATGCTCTAATTGGATATTATGATGCTTTGT
TTTAGGTCGATTACTTTCCTTCGAGGTATGATCCTACTCGTCATGCTGAG
AGATATCCCATTCCTTCTGATGTAATTACAGGAAGGCGTGAGAAGGCTTG
CA
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