FC868670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_YEAST (Ribulose-phosphate 3-epimerase OS=Saccharomyces cerevisiae GN=RPE1 PE=1 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.517e-28 Identity = 68/169 (40.24%), Postives = 97/169 (57.40%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP-------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQS-STIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 I++PSIL+++FA LG + V AG DW+H+DVMDG FVPNIT+G +V +LR P D H+M+ PE+ V DF K GAD + H E + +HL + IK G KA + P TS+ + + +D+ L+M+V PGFGGQ F+E + K+ Sbjct: 5 IIAPSILASDFANLGCECHKVINAGADWLHIDVMDGHFVPNITLGQPIVTSLRRSVPRPGDASNTEKKPTAFFDCHMMVENPEKWVDDFAKCGADQFTFHYEATQDPLHL---VKLIKSKGIKAACAIKPGTSVDVLFELAPHLDMALVMTVEPGFGGQKFMEDMMPKV 170
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE1_ORYSJ (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica GN=Os09g0505700 PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.344e-26 Identity = 62/157 (39.49%), Postives = 92/157 (58.60%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDV---VDLVLIMSVNPGFGGQSFIESQVKKI 686 ++PS+LS++FA L + + G DW+H+D+MDG FVPN+TIG V+ +LR T LD HLM+ P V KAGA + H E S + + IK G + GV L P T + + +++ V+LVL+M+V PGFGGQ F+ ++K+ Sbjct: 9 IAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKAYLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRD-NWQELIQSIKAKGMRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKV 164
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_CANGA (Ribulose-phosphate 3-epimerase OS=Candida glabrata GN=RPE1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.592e-25 Identity = 64/171 (37.43%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLP----------------LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 I++PSIL+++FA LG + V +G +W+H+DVMDG FVPNIT+G +V +LR D H+M+ EPE+ V DF KAGAD + H E +T + IK+ G KA + P T + + + +D+ L+M+V PGFGGQ F+ + K+ Sbjct: 5 IIAPSILASDFANLGCECHRVINSGAEWLHIDVMDGHFVPNITLGQPIVTSLRRAVPRSQEEEKASGEVARPTAFFDCHMMVEEPEKWVADFAKAGADQFTFHYE--ATKDPLSLVKLIKENGIKAACAIKPGTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKV 173
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: ALSE_ECOLI (D-allulose-6-phosphate 3-epimerase OS=Escherichia coli (strain K12) GN=alsE PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25 Identity = 52/154 (33.77%), Postives = 93/154 (60.39%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +SPS++ + K EQ++ ++ + D+ H+D+MDG FVPN+T+ P V ++ + PLD HLM+ P+ + +AGAD +++H E + R +++I+ K G++LNP T + A++ + D + +M+V+PGF GQ FI + K+ Sbjct: 3 ISPSLMCMDLLKFKEQIEFID-SHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFITLHPETING-QAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKL 154
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_SCHPO (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe GN=SPAC31G5.05c PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.774e-25 Identity = 60/157 (38.22%), Postives = 94/157 (59.87%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALR---PVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 ++PS+L+ +FA L ++V + G DW+HVDVMD +FVPN+TIGP+VV A+R + D HLM++EPE+ + AGA + H E +T +++ + G G L P T + I ++ +D+VL+M+V PG GGQSF+ + K+ Sbjct: 6 IAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYTKEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYE--ATEKHEEIISRAHEKGMLVGCALKPKTPVEVILPFVEKLDMVLVMTVEPGKGGQSFMPECLPKV 160
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_ASHGO (Ribulose-phosphate 3-epimerase OS=Ashbya gossypii GN=RPE1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.286e-24 Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = 3 Query: 222 IVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--------TDLP---LDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 I++PSIL+++FA L V AG +W+H+DVMDG FVPNIT+GP +V +LR +D P D H+M+ EPE+ V F++ GAD + H E +T + + IK G +A + P T + + + +D+ L+M+V PGFGGQ F+ + K+ Sbjct: 5 IIAPSILASDFANLECGCHRVINAGAEWLHIDVMDGHFVPNITLGPPIVKSLRKAVPRVGDKESDKPKAFFDCHMMVAEPEKWVDVFVENGADQFTFHYE--ATKNPLELVKLIKSRGIRAACAIKPDTPVDVLFELAPYLDMALVMTVEPGFGGQKFMPDMMPKV 168
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_PONAB (Ribulose-phosphate 3-epimerase OS=Pongo abelii GN=RPE PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24 Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ +PEQ V AGA+ + H E +T + + I++ G K G+ + P TS+ + + +D+ L+M+V PGFGGQ F+E + K+ Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 160
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_HUMAN (Ribulose-phosphate 3-epimerase OS=Homo sapiens GN=RPE PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24 Identity = 60/156 (38.46%), Postives = 95/156 (60.90%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ +PEQ V AGA+ + H E +T + + I++ G K G+ + P TS+ + + +D+ L+M+V PGFGGQ F+E + K+ Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTSVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 160
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_MOUSE (Ribulose-phosphate 3-epimerase OS=Mus musculus GN=Rpe PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.384e-24 Identity = 59/156 (37.82%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPV--TDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 + PSIL+++ A LG + + +G D++H+DVMDG FVPNIT G VV++LR D D+H+M+ PEQ V AGA+ + H E +T + + I++ G K G+ + P T++ + + +D+ L+M+V PGFGGQ F+E + K+ Sbjct: 7 IGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLE--ATENPGALIKDIRENGMKVGLAIKPGTTVEYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 160
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: RPE_ENCCU (Ribulose-phosphate 3-epimerase OS=Encephalitozoon cuniculi GN=RPE1 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.872e-16 Identity = 54/154 (35.06%), Postives = 78/154 (50.65%), Query Frame = 3 Query: 234 SILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVH---CEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 SIL NF L E++ ++ G IH+DVMD FV NIT GP +++ + D DVH+M+ P + +V++H C+++ R N + G+ LNP T + E + D VLIMSV PGFGGQ F E + K+ Sbjct: 13 SILDCNFGNLEEELGELKRNGVTNIHLDVMDTTFVKNITFGPCIINRILE-HDFVFDVHMMVESPLDIIMQIDLERVSLVTIHSEVCDKAGVAEYLRKRNVL------FGIALNPETQVDDAE--MRSADFVLIMSVKPGFGGQKFQEECLAKV 157 The following BLAST results are available for this feature:
BLAST of FC868670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868670 ID=FC868670; Name=FC868670; organism=Citrus clementina; type=EST; length=687bpback to top |