FC868670
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: SGCE_ECOLI (Protein sgcE OS=Escherichia coli (strain K12) GN=sgcE PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 219 IIVSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQIKDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQSFIESQVKKI 686 +I+ PS+ SAN G ++ A++ +H+D+ D F+ NIT G V A+ T PL H M+ P++ + + VH E + + TL +I+ GA+AG+V NPAT + A + +D V++M+ P GQ FI S +KI Sbjct: 1 MILHPSLASANPLHYGRELTALDNLDFGSLHLDIEDSSFINNITFGMKTVQAVARQTPHPLSFHFMLARPQRWFNALAEIRPAWIFVHAE--TLDYPSETLTEIRHTGARAGLVFNPATPIDAWRYLASELDGVMVMTSEPDGQGQRFIPSMCEKI 154
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: LSRE_SALPA (Putative epimerase lsrE OS=Salmonella paratyphi A GN=lsrE PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 49/153 (32.03%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQ 656 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V+ L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G + Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVEQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: LSRE_SALTY (Putative epimerase lsrE OS=Salmonella typhimurium GN=lsrE PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQ 656 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G + Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: LSRE_SALTI (Putative epimerase lsrE OS=Salmonella typhi GN=lsrE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQ 656 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G + Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWAAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIDGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: LSRE_SALPB (Putative epimerase lsrE OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=lsrE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQ 656 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G + Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170
BLAST of FC868670 vs. ExPASy Swiss-Prot
Match: LSRE_SALCH (Putative epimerase lsrE OS=Salmonella choleraesuis GN=lsrE PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 49/153 (32.03%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 225 VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLDVHLMIVEPEQRVPDFIKAGADIVSVHCEQSSTIHLHRTLNQI---------KDLGAKAGVVLNPATSLSAIECVLDVVDLVLIMSVNPGFGGQ 656 +S IL+ + L ++ +E +H+D+MDG+F P T+GP V L P T + DVHLM+ + +KAGA +++ E IHLH TL+ + ++ G+ L PAT L I +L V+++ +++VNPG+G + Sbjct: 22 LSVGILAGQWIALHRYLQQLEALNQPLLHLDLMDGQFCPQFTVGPWAVGQL-PQTFIK-DVHLMVADQWTAAQACVKAGAHCITLQAE--GDIHLHHTLSWLGQQTVPVIGGEMPVIRGISLCPATPLDVIIPILSDVEVIQLLAVNPGYGSK 170 The following BLAST results are available for this feature:
BLAST of FC868670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868670 ID=FC868670; Name=FC868670; organism=Citrus clementina; type=EST; length=687bpback to top |