FC868672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.179e-13 Identity = 34/61 (55.74%), Postives = 50/61 (81.97%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDRV 208 K E +++M+GLD+AGKTTILYKLK ++V T+PT+GFNVE +E ++S T+WD+GGQ ++ Sbjct: 10 KAEAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQL 70 HSP 2 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 +R W+ Y + L++V+DS D R+ EA EL +L + + LV ANKQ+ P A+ EI ++LGL ++ W +++ A +G+GL E L Sbjct: 70 LRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGFQKHCWELRACSALTGQGLQEAL 166
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 40/98 (40.82%), Postives = 57/98 (58.16%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP W++YF+NT L EL +L E++L +L+FANKQDL A A+EI + L LH++R R W IQS A +GEG+ +G++ Sbjct: 74 IRPYWKNYFENTDIL-----------------ELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMN 154
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 33/58 (56.90%), Postives = 48/58 (82.76%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQ 199 K E +++M+GLD+AGKTT+LYKLK ++V T+PT+GFNVE ++ ++S T+WDVGGQ Sbjct: 10 KAEAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQ 67 HSP 2 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 +R W+ Y + T L++V+DS D R+ E+ EL +LN+ + LV ANKQ+ P+A+ +I ++L L + W ++ A +GEGL E L Sbjct: 70 LRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDHCWELRGCSALTGEGLPEAL 166
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 32/57 (56.14%), Postives = 46/57 (80.70%), Query Frame = 2 Query: 41 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDRV 208 +++M+GLD AGKTTILYKLK +V T+PT+GFNVE +E ++S T+WD+GGQ ++ Sbjct: 12 QVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQL 68
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.996e-12 Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 202 TKL + E I M+GLD AGKTT+L L+ GE+ T+PT+GFN E V ++ F VWD+GGQ+ Sbjct: 14 TKLRGLFSGQSERSITMIGLDGAGKTTLLLYLQTGEVHQTVPTLGFNCENVTLGSMKFQVWDIGGQN 80
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 34/97 (35.05%), Postives = 59/97 (60.82%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 +R W++YF++T+ +I+VVDS D R+ E R+ L +L E++L +LV ANK D+ A+++ EI+ L + + HW I S A +G + + + Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAI 169
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 26/77 (33.77%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 420 RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 650 R +W Y + ++++VD+ DR++V +R+ELH +L++ +L+ +LV NK+DLPNA++ ++ +K+ L +++ R Sbjct: 79 RSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDR 155 The following BLAST results are available for this feature:
BLAST of FC868672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868672 ID=FC868672; Name=FC868672; organism=Citrus clementina; type=EST; length=711bpback to top |