FC868672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.282e-38 Identity = 74/98 (75.51%), Postives = 88/98 (89.80%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IR LWRHY++NT+G+IFVVDSNDR R+ EAR+ + RMLNEDELR+A LVFANKQDLP AM+AAEIT+KLGLHS+R R W+IQ+TCATSGEGLYEGL+ Sbjct: 74 IRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLE 171 HSP 2 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 59/72 (81.94%), Postives = 67/72 (93.06%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRVSNI 217 +KLFS LF KEMRILMVGLD AGKTT+LYKLKLGE++TTIPTIGFNVETV+YKNISFTVWDVGGQDR+ ++ Sbjct: 6 SKLFSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITTIPTIGFNVETVQYKNISFTVWDVGGQDRIRSL 77
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38 Identity = 75/98 (76.53%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRPLWRHYFQNTQGLIFVVDSNDR+R+ E L +ML EDEL+DAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLD Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLD 171 HSP 2 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 + LFS+LF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++ Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 4.871e-38 Identity = 75/98 (76.53%), Postives = 84/98 (85.71%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRPLWRHYFQNTQGLIFVVDSNDR+R+ E L +ML EDEL+DAVLL+FANKQDLPNAM +E+TDKLGL SLR R WY+Q+TCAT G GLYEGLD Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLD 171 HSP 2 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 61/69 (88.41%), Postives = 66/69 (95.65%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 + LFS+LF KK+MRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWDVGGQD++ Sbjct: 6 SSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35 Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL 166 HSP 2 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K+ SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35 Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL 166 HSP 2 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K+ SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35 Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL 166 HSP 2 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K+ SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.040e-35 Identity = 66/97 (68.04%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GLYEGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLYEGL 166 HSP 2 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K+ SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.123e-34 Identity = 65/97 (67.01%), Postives = 82/97 (84.54%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CAT+G+GLYEGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATTGDGLYEGL 166 HSP 2 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 53/68 (77.94%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K+ SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KVLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF6_XENLA (ADP-ribosylation factor 6 OS=Xenopus laevis GN=arf6 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.915e-34 Identity = 65/97 (67.01%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CA SG+GLYEGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCPDRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCAASGDGLYEGL 166 HSP 2 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K+FSK+F KEMRILM GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KMFSKIFGNKEMRILMRGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF3_DROME (ADP-ribosylation factor 3 OS=Drosophila melanogaster GN=Arf51F PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 7.278e-34 Identity = 65/97 (67.01%), Postives = 81/97 (83.51%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHY+ TQGLIFVVD DRDR+ EAR ELHR++N+ E+RDA++L+FANKQDLP+AM EI +KLGL +R R+WY+Q +CATSG+GL EGL Sbjct: 70 IRPLWRHYYTGTQGLIFVVDCADRDRIDEARTELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDRNWYVQPSCATSGDGLSEGL 166 HSP 2 Score: 117.087 bits (292), Expect = 9.528e-26 Identity = 54/68 (79.41%), Postives = 61/68 (89.71%), Query Frame = 2 Query: 5 KLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 KL SK+F KEMRILM+GLDAAGKTTILYKLKLG+ VTTIPT+GFNVETV YKN+ F VWDVGGQD++ Sbjct: 3 KLLSKIFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKI 70 The following BLAST results are available for this feature:
BLAST of FC868672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868672 ID=FC868672; Name=FC868672; organism=Citrus clementina; type=EST; length=711bpback to top |