FC868672
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF_GIALA (ADP-ribosylation factor OS=Giardia lamblia PE=3 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.161e-33 Identity = 64/100 (64.00%), Postives = 82/100 (82.00%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRD--RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRPLWRHY+QNT LI+V+DS D + R+ +A++ELH +L EDELRDA LLVFANKQDLP AM+ ++T++LGL L++R WYIQ TCA SG+GLY+GLD Sbjct: 74 IRPLWRHYYQNTDALIYVIDSADLEPKRIEDAKNELHTLLGEDELRDAALLVFANKQDLPKAMSTTDLTERLGLQELKKRDWYIQPTCARSGDGLYQGLD 173 HSP 2 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 58/69 (84.06%), Postives = 66/69 (95.65%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 +K+F KLF+KKE+RILMVGLDAAGKTTILYKL LGE+VTT+PTIGFNVETVEYKNI+FTVWDVGGQD + Sbjct: 6 SKIFGKLFSKKEVRILMVGLDAAGKTTILYKLMLGEVVTTVPTIGFNVETVEYKNINFTVWDVGGQDSI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3) HSP 1 Score: 135.576 bits (340), Expect = 2.589e-31 Identity = 65/98 (66.33%), Postives = 79/98 (80.61%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IR LWRHYFQN QGLIFVVDS+D +R+ EAR+ELHR+L ++EL A +LVFANKQD NA+ AE+ +KLGLHSL +R W IQ T A SG+GLYEGL+ Sbjct: 74 IRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKRCWLIQGTSAISGQGLYEGLE 171 HSP 2 Score: 107.071 bits (266), Expect = 9.860e-23 Identity = 46/72 (63.89%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRVSNI 217 +++ + K ++RILMVGLD +GKTTILYKLKLGE+VTT+PTIGFN+ETVEYK I+FTVWD+GGQ+++ + Sbjct: 6 SRIAKRFLPKSKVRILMVGLDGSGKTTILYKLKLGEVVTTVPTIGFNLETVEYKGINFTVWDIGGQEKIRKL 77
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 60/97 (61.86%), Postives = 76/97 (78.35%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IRPLWRHYF T+GLIFVVDS D +R+ EAR ELHR++++ E+RD +LLV ANKQDLP A++ A+ITD L L L+ R W +Q TCA +G+GL EGL Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDRLWNVQPTCALTGDGLLEGL 174 HSP 2 Score: 113.235 bits (282), Expect = 1.376e-24 Identity = 53/69 (76.81%), Postives = 61/69 (88.41%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 +K FS+LF+ KEMRILM+GLDAAGKTTILYKLKL + V TIPT+GFNVETV YKNI F VWDVGGQD++ Sbjct: 10 SKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLNQSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKI 78
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28 Identity = 57/98 (58.16%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP WR YF NTQ +I+VVDS+D DR+ A++E H +L EDEL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I TCA GEGL+EGLD Sbjct: 74 IRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLD 171 HSP 2 Score: 103.605 bits (257), Expect = 1.090e-21 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 T++FS +F KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+GGQ + Sbjct: 6 TRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF1_BRARP (ADP-ribosylation factor 1 OS=Brassica rapa subsp. pekinensis GN=ARF1 PE=2 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 56/98 (57.14%), Postives = 74/98 (75.51%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRP WR YF NTQ +I+VVDS+D DR+ A++E H +L E+EL+ AV+L+FANKQDLP A++ A +T+ L LH ++ R W I TCA GEGL+EGLD Sbjct: 74 IRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEEELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLD 171 HSP 2 Score: 103.605 bits (257), Expect = 1.090e-21 Identity = 46/69 (66.67%), Postives = 59/69 (85.51%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 T++FS +F KE RIL++GLD AGKTTILY+L++GE+V+TIPTIGFNVETV+Y NI F VWD+GGQ + Sbjct: 6 TRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEVVSTIPTIGFNVETVQYNNIKFQVWDLGGQTSI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27 Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLD 710 +RPLW+HY+ NTQ ++FVVDS+ RDR+ EA EL ++L E ELRDA+LL+FANKQD+ A++ EIT+ L LH L R WYIQ A SG GLYEGLD Sbjct: 441 LRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLD 539 HSP 2 Score: 85.1149 bits (209), Expect = 4.012e-16 Identity = 38/60 (63.33%), Postives = 49/60 (81.67%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K E+R++ +GLD AGKTTIL+KLK E + IPTIGFNVETVEYKN+ FT+WDVG + ++ Sbjct: 382 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGEKHKL 441
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARD1_MOUSE (GTP-binding protein ARD-1 OS=Mus musculus GN=Trim23 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27 Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLD 710 +RPLW+HY+ NTQ ++FVVDS+ RDR+ EA EL ++L E ELRDA+LL+FANKQD+ A++ EIT+ L LH L R WYIQ A SG GLYEGLD Sbjct: 461 LRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLD 559 HSP 2 Score: 88.1965 bits (217), Expect = 4.740e-17 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K E+R++ +GLD AGKTTIL+KLK E + IPTIGFNVETVEYKN+ FT+WDVGG+ ++ Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKL 461
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARD1_HUMAN (GTP-binding protein ARD-1 OS=Homo sapiens GN=TRIM23 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.052e-27 Identity = 59/99 (59.60%), Postives = 74/99 (74.75%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-RQRHWYIQSTCATSGEGLYEGLD 710 +RPLW+HY+ NTQ ++FVVDS+ RDR+ EA EL ++L E ELRDA+LL+FANKQD+ A++ EIT+ L LH L R WYIQ A SG GLYEGLD Sbjct: 461 LRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLD 559 HSP 2 Score: 88.1965 bits (217), Expect = 4.740e-17 Identity = 39/60 (65.00%), Postives = 50/60 (83.33%), Query Frame = 2 Query: 29 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 K E+R++ +GLD AGKTTIL+KLK E + IPTIGFNVETVEYKN+ FT+WDVGG+ ++ Sbjct: 402 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIGFNVETVEYKNLKFTIWDVGGKHKL 461
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3) HSP 1 Score: 115.931 bits (289), Expect = 2.123e-25 Identity = 57/97 (58.76%), Postives = 73/97 (75.26%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL 707 IR LW++YF NT L+FVVDS+D +R+ EA++EL +L E EL D+ LLVFANKQD+PNA + AE+T L L SL+ R W+I T A SG+GLYEGL Sbjct: 74 IRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNREWFICGTNAHSGQGLYEGL 170 HSP 2 Score: 93.5893 bits (231), Expect = 1.128e-18 Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 +K+ S +F E R LM+GLD AGKTTILYKLKL E V TIPTIGFNVETV ++ I+ TVWDVGGQ ++ Sbjct: 6 SKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNETVNTIPTIGFNVETVTFQKITLTVWDVGGQKKI 74
BLAST of FC868672 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.621e-25 Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 417 IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLD 710 IRPLW+HY+ + +IFVVDS DR+R+ E ++E+ +L +DEL+ +LVFANKQD+ NAMN AEI + L L+S++ R WY+Q A +G+YEG D Sbjct: 82 IRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFD 179 HSP 2 Score: 107.457 bits (267), Expect = 7.549e-23 Identity = 48/69 (69.57%), Postives = 60/69 (86.96%), Query Frame = 2 Query: 2 TKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDRV 208 + +FS KKE RILM+GLD AGK+T+LYKLKLG++V+TIPTIGFNVET+EYKN+S TVWDVGGQ ++ Sbjct: 14 SNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVSTIPTIGFNVETIEYKNLSMTVWDVGGQHKI 82 The following BLAST results are available for this feature:
BLAST of FC868672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 137
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868672 ID=FC868672; Name=FC868672; organism=Citrus clementina; type=EST; length=711bpback to top |