FC868675

Overview
NameFC868675
Unique NameFC868675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAO_BOVIN (Guanine nucleotide-binding protein G(o) subunit alpha OS=Bos taurus GN=GNAO1 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L+ L  I   DY+P++ DIL     T+  G+    F+F +                L ++L  V  +   E  KW+  FED+  +IFCVALS YDQ  V       N+M  S   F+SI  +  F     +L LNK DLF EKI+  PL  C
Sbjct:  156 YLDSLDRIGAADYQPTEQDILRTRVKTT--GIVETHFTFKN----------------LHFRLFDVGGQR-SERKKWIHCFEDVTAIIFCVALSGYDQ--VLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTIC 287          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI1_CAVPO (Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Cavia porcellus GN=GNAI1 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13
Identity = 51/153 (33.33%), Postives = 74/153 (48.37%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I++++Y P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALSDYD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI+  PL  C
Sbjct:  155 YLNDLDRIAQSNYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTIC 286          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAO_MOUSE (Guanine nucleotide-binding protein G(o) subunit alpha OS=Mus musculus GN=Gnao1 PE=1 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 53/153 (34.64%), Postives = 73/153 (47.71%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L+ L  I   DY+P++ DIL     T+  G+    F+F +                L ++L  V  +   E  KW+  FED+  +IFCVALS YDQ  V       N+M  S   F+SI  +  F     +L LNK DLF EKI+  PL  C
Sbjct:  156 YLDSLDRIGAGDYQPTEQDILRTRVKTT--GIVETHFTFKN----------------LHFRLFDVGGQR-SERKKWIHCFEDVTAIIFCVALSGYDQ--VLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTIC 287          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI2_CHICK (Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Gallus gallus GN=GNAI2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 52/153 (33.99%), Postives = 72/153 (47.06%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I+R DY P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALS YD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI + PL  C
Sbjct:  156 YLNDLERIARADYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIVHSPLTIC 287          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI1_XENLA (Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Xenopus laevis GN=gnai1 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 51/153 (33.33%), Postives = 72/153 (47.06%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I++  Y P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALSDYD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI+  PL  C
Sbjct:  155 YLNDLDRIAQNSYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKRSPLTIC 286          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI1_RAT (Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Rattus norvegicus GN=Gnai1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I++ +Y P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALSDYD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI+  PL  C
Sbjct:  155 YLNDLDRIAQPNYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTIC 286          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI1_HUMAN (Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Homo sapiens GN=GNAI1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I++ +Y P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALSDYD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI+  PL  C
Sbjct:  155 YLNDLDRIAQPNYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTIC 286          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI1_BOVIN (Guanine nucleotide-binding protein G(i) subunit alpha-1 OS=Bos taurus GN=GNAI1 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I++ +Y P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALSDYD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI+  PL  C
Sbjct:  155 YLNDLDRIAQPNYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSDYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTIC 286          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI2_ORYLA (Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Oryzias latipes GN=gnai2 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L+ L  IS+ DY P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVA+S YD    +     MN+M  S K F+SI  +  F +   +L LNK DLFE+KI + PL  C
Sbjct:  156 YLKDLERISKPDYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVAMSAYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEQKIAHSPLTIC 287          
BLAST of FC868675 vs. ExPASy Swiss-Prot
Match: GNAI2_MACFA (Guanine nucleotide-binding protein G(i) subunit alpha-2 OS=Macaca fascicularis GN=GNAI2 PE=2 SV=3)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 51/153 (33.33%), Postives = 73/153 (47.71%), Query Frame = 3
Query:    3 FLERLVDISRTDYEPSDLDILYAEAVTSSNGLACVDFSFPHSASDDSVDTADQHDSLLRYQLIRVQARGLGENCKWLEMFEDIGMVIFCVALSDYDQFSVDGNGSLMNKMMLSRKFFESIVTHPTFDQMEFLLILNKYDLFEEKIENVPLNQC 461
            +L  L  I+++DY P+  D+L     T+  G+    F+F                  L +++  V  +   E  KW+  FE +  +IFCVALS YD    +     MN+M  S K F+SI  +  F     +L LNK DLFEEKI + PL  C
Sbjct:  156 YLNDLERIAQSDYIPTQQDVLRTRVKTT--GIVETHFTFKD----------------LHFKMFDVGGQR-SERKKWIHCFEGVTAIIFCVALSAYDLVLAEDEE--MNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLTIC 287          
The following BLAST results are available for this feature:
BLAST of FC868675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
GNAO_BOVIN3.243e-1334.64Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAI1_CAVPO4.236e-1333.33Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAO_MOUSE5.532e-1334.64Guanine nucleotide-binding protein G(o) subunit al... [more]
GNAI2_CHICK5.532e-1333.99Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI1_XENLA7.225e-1333.33Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI1_RAT7.225e-1333.33Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI1_HUMAN7.225e-1333.33Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI1_BOVIN7.225e-1333.33Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI2_ORYLA9.436e-1332.68Guanine nucleotide-binding protein G(i) subunit al... [more]
GNAI2_MACFA9.436e-1333.33Guanine nucleotide-binding protein G(i) subunit al... [more]

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Properties
Property NameValue
Genbank descriptionC31003D04EF AbioticL1 Citrus clementina cDNA clone C31003D04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868675 ID=FC868675; Name=FC868675; organism=Citrus clementina; type=EST; length=723bp
ATTTCCTAGAGCGTCTTGTTGATATATCGAGAACAGACTATGAGCCTTCA
GATTTGGATATTCTATATGCTGAGGCTGTCACTTCATCAAATGGGCTTGC
TTGTGTGGACTTCTCATTTCCCCACTCAGCTTCTGATGATTCTGTTGACA
CTGCTGATCAGCATGACTCTTTGCTTAGATACCAACTTATTAGAGTCCAG
GCAAGAGGTCTTGGGGAAAACTGCAAGTGGCTAGAGATGTTTGAAGACAT
TGGAATGGTCATTTTCTGTGTTGCCTTGAGTGACTATGACCAATTTTCTG
TTGACGGGAATGGGTCACTTATGAACAAGATGATGCTGAGCAGGAAATTC
TTTGAAAGCATTGTTACACATCCAACTTTTGATCAGATGGAATTTCTTTT
GATACTAAACAAATATGATCTGTTTGAGGAAAAAATAGAAAATGTACCGT
TGAACCAGTGCGACTGGTTTGATGATTTTCATCCAGTGATCAGCCGTCAT
CACCCCAATGGCAACAGAAACAGCAACAACATCAATCATAGCCCCTCACT
AGGTCAGCTGGCTTCCCACTATGTTGCTGTCAAGTTCAAGAGGCTTTATT
CATCTCTCACTGGGCGGAAATTGTATGTTTCCCCTGGTGAGGGATTGGAG
CCTAATAGTGTTGATGCTGCTCTTAAAAATGCAGGGAGGTTCTAAAGTGG
GATGAAGAGAAAACATCTTTAGC
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