FC868680
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_SYNP6 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dapB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27 Identity = 67/157 (42.68%), Postives = 98/157 (62.42%), Query Frame = 2 Query: 104 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI--DSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 568 I V++NGA ++GR + A+ A + + GAI + G+DIG + + PLE+PV +DL +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E Sbjct: 5 IPVVVNGATGKMGRETIKAIAAADDVTLVGAIARSADVQGQDIGEIVGLG-PLEVPVTNDLEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAEKASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILE 160
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_SYNE7 (Dihydrodipicolinate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=dapB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27 Identity = 67/157 (42.68%), Postives = 98/157 (62.42%), Query Frame = 2 Query: 104 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAI--DSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVE 568 I V++NGA ++GR + A+ A + + GAI + G+DIG + + PLE+PV +DL +L SQ + VV+DFT +YDNV++A A+G+R VV + E + L+ F +KAS+GCL+ P SIG +LL QAAI AS Y +VEI+E Sbjct: 5 IPVVVNGATGKMGRETIKAIAAADDVTLVGAIARSADVQGQDIGEIVGLG-PLEVPVTNDLEGMLCLASQEREVPVVVDFTHPDCIYDNVRKAIAYGVRPVVGTTGLNNEQLQELAEFAEKASVGCLVIPNFSIGMVLLMQAAIQASRFYDHVEILE 160
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_THEEB (Dihydrodipicolinate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=dapB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26 Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 2 Query: 77 CSTNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 586 C + P I VI+ GA+ ++GR V AV +A + A+D VGEDIG + LEIP+ L V + +Q K V++DFT VY+NV+ A A+G+ VV + E + L+ F DKA MG +IAP SIG +LLQ+AAI AS ++ +VEI+E N + Sbjct: 5 CMSTP----ISVIVVGALGKMGREVVKAVHQAPDTALYAAVDRKQVGEDIGEALGLGT-LEIPISGSLQEVCVAAAQEKQPVVMVDFTHPQAVYENVRMAIAYGVYPVVGTTGLSPEQIEELAEFADKADMGAVIAPNFSIGMVLLQEAAIRASQYFDHVEIIELHHNQK 169
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_SYNP2 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dapB PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25 Identity = 67/174 (38.51%), Postives = 103/174 (59.20%), Query Frame = 2 Query: 98 SNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHS--VGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613 + I V+INGA ++GR V AV A ME+ A+D + +G+D G + +E+P+++DL L +QSK + V++DFT S VY N + A A+G+R VV + E ++ L F +KAS G LI P SIG +LLQQA++ A+ ++ +VEI+E N + + T I Sbjct: 5 NKIPVVINGAGGKMGREVVKAVAGAADMEIIAAVDKNPALLGQDAGEIAGCGA-VEVPIVNDLEASLVMATQSKIQGVMVDFTHPSGVYANTRAAIAYGVRPVVGTTGLSEEQINDLKEFAEKASTGALIIPNFSIGVVLLQQASLQAAKYFDHVEIIELHHNQKADAPSGTAI 177
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_GLOVI (Dihydrodipicolinate reductase OS=Gloeobacter violaceus GN=dapB PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.700e-25 Identity = 60/161 (37.27%), Postives = 95/161 (59.01%), Query Frame = 2 Query: 104 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 586 I V++ G ++GR V AV A M V GA+D + ED G + + P+++ V +L + ++Q +A V++DFT +YD V+ A A+G+R VV + E + L+ F DKAS GC++AP +IG ILLQQA + A+ ++ +VEI+E N + Sbjct: 3 IPVVVVGCAGKMGREVVKAVHAAPDMAVVGAVDRSHIDEDAGELAGIG-PIDVLVTDNLEITCAMVAQERAPGVMVDFTHPRGIYDRVRSAIAYGVRPVVGTTGLPPEHIEELAEFADKASTGCIVAPNFAIGMILLQQACLRAAEYFDHVEIIELHHNRK 162
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_ACAM1 (Dihydrodipicolinate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=dapB PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.801e-23 Identity = 61/165 (36.97%), Postives = 97/165 (58.79%), Query Frame = 2 Query: 110 VIINGAVKEIGRAAVIAVTKARGMEVAGAID------SHSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNAR 586 VI+ GA ++GR + AV +A + + A+D S GE +G+ L I + ++L VL + +Q K V++DFT S+VY N++ A A+G+ V+ + E ++ L+ F +KASMGCL+ P SIG +LLQQAA+ AS ++ +VEI+E N + Sbjct: 9 VIVTGAAGKMGREVIKAVVQADDLRLYAAVDRNPDVFSLDAGELVGL-----DTLNIELTNELEPVLAAAAQEKQPCVMVDFTHPSSVYSNIRSAIAYGVFPVIGTTGLSDEQMNDLTEFTEKASMGCLVIPNFSIGMVLLQQAAVQASQYFDHVEIIELHHNQK 168
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_PROMP (Dihydrodipicolinate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=dapB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.308e-20 Identity = 64/202 (31.68%), Postives = 107/202 (52.97%), Query Frame = 2 Query: 110 VIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVLGSISQS----KARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHIYLYPKFQNKHSFHTKRKLK 697 V+++GA+ +G V +V + E+ AID++ GE+I + ++++ ++ V +DL L SISQ K + V++DFT +VY+N + A A+G+ VV + ++ L+ F KA++GC I P S+G +LLQQAA A+ Y N+E++E N + + T I + YPK N+ LK Sbjct: 11 VLVSGALGRMGSEVVNSVLNSSDCELVAAIDTNKKNNGENISQLLNLKKS-DVLVSNDLEGSLCSISQDYRNEKIKPVLVDFTHPDSVYENTRSAIAYGISPVVGTTGLTPSQINDLAIFAQKANIGCAIIPNFSVGMVLLQQAASVAAKFYDNIELIEMHHNQKADSPSGTCIKTAEMIEE---YPKKYNQSLVEESESLK 208
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_PROMM (Dihydrodipicolinate reductase OS=Prochlorococcus marinus (strain MIT 9313) GN=dapB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.888e-19 Identity = 63/189 (33.33%), Postives = 100/189 (52.91%), Query Frame = 2 Query: 83 TNPPQSNIKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSH------SVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKAR------AVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613 T+ P I V++ GA+ +G + AV A E+ GA+D+ +GE++G+ L++ + SD+ L S+SQS R AV++DFT S VY++ + A A+G+ V+ + + + LS F KASMG + P S+G +LLQQAA +A+ Y N E+ E N + + T I Sbjct: 2 TSVPPELIPVVVVGALGRMGAEVIKAVHLASDCELVGAVDTTPGKEGVEIGEELGIGV-----LDVALTSDIEACLCSVSQSFHRTGPGQGAVLVDFTHPSVVYEHTRAAFAYGVHPVIGTTGLSHQQLVDLSEFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDNAELTELHHNRKADAPSGTCI 185
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_SYNR3 (Dihydrodipicolinate reductase OS=Synechococcus sp. (strain RCC307) GN=dapB PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.221e-19 Identity = 58/172 (33.72%), Postives = 93/172 (54.07%), Query Frame = 2 Query: 104 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDS--HSVGEDIGMVCDMEQPLEIPVMSDLTMVLGSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLI 613 I V++ GA+ +G + AV A ++ GAID+ GED+G+ + + LE+ + D L SQ AV++DFT VY++ + A A+G+ V+ + E + L++F KASMG + P S+G +LLQQAA +A+ Y + E+VE N + + T I Sbjct: 5 IPVVVAGALGRMGAEVIKAVHTAGDCQLVGAIDTCPGREGEDVGLALGLGE-LEVALTQDFEGALCLASQQHPGAVLVDFTHPKVVYEHTRAAIAYGVTPVIGTTGLAPEQLQELASFAAKASMGGAVIPNFSVGMVLLQQAAAAAARFYDHAELVELHHNRKADAPSGTCI 175
BLAST of FC868680 vs. ExPASy Swiss-Prot
Match: DAPB_PROMA (Dihydrodipicolinate reductase OS=Prochlorococcus marinus GN=dapB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.371e-19 Identity = 59/185 (31.89%), Postives = 98/185 (52.97%), Query Frame = 2 Query: 104 IKVIINGAVKEIGRAAVIAVTKARGMEVAGAIDSHSV--GEDIGMVCDMEQPLEIPVMSDLTMVL----GSISQSKARAVVIDFTDASTVYDNVKQATAFGMRSVVYVPHIQLETVSALSAFCDKASMGCLIAPTLSIGSILLQQAAISASFHYKNVEIVESRPNARVRYMTRTLISMQVCLRHI 640 I V++ GA+ ++G + A+ K+ E+ AID+ + G DIG M+Q +++ V +DL L S+ S AV+IDFT + VY++ + + A+G+ V+ + + + L F +KAS+G I P S+G +LLQQAA +A+ Y E+ ES N + + T I + I Sbjct: 4 IPVLVAGALGKMGSEVIKAIYKSNDCELVAAIDNANEMEGVDIGTALGMDQ-MDVAVTADLEGSLCVASQSVRNSSGNAVLIDFTHPNVVYEHSRASIAYGVHPVIGTTGLSIVQLEELREFANKASIGAAIIPNFSVGMVLLQQAAAAAASFYDYAELTESHHNQKADAPSGTCIKTAEIIEEI 187 The following BLAST results are available for this feature:
BLAST of FC868680 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868680 ID=FC868680; Name=FC868680; organism=Citrus clementina; type=EST; length=745bpback to top |