FC868683
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.487e-21 Identity = 66/188 (35.11%), Postives = 96/188 (51.06%), Query Frame = 3 Query: 96 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFV 656 K H+NI IGHVD GK+T T + L K ++++ +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV M+ NK D + A E+V+ EV L K + +++PFV Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLAKQVGVPNMVVFLNKED----QIDDADLLELVELEVRELLSKYDFPGDQIPFV 171
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 58/189 (30.69%), Postives = 96/189 (50.79%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 656 + K H+N+ IGHVD GK+T T + L + + +R+++ +D ER RGITI+ A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + + E+ L K + +++P + Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITMTLAALGQATAKRYDE---------------IDAAPEERARGITINTAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPSLVVFLNKVDMVD---DEELLELVELEIRELLSKYDFPGDEIPII 171
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_STRU0 (Elongation factor Tu OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGDNMIE 692 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_STRPZ (Elongation factor Tu OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGDNMIE 692 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_STRP8 (Elongation factor Tu OS=Streptococcus pyogenes serotype M18 GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 71/204 (34.80%), Postives = 103/204 (50.49%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGDNMIE 692 + K H+NI IGHVD GK+T T + V+ R + K YA + D ERERGITI+ A ++ET + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAIT--------TVLARRLPTSVNQPK---DYASI-DAAPEERERGITINTAHVEYETETRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYE 189
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_MYCS2 (Elongation factor Tu OS=Mycobacterium smegmatis GN=tuf PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 73/201 (36.32%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVLIS---GFEGD 680 + K H+NI IGHVD GK+T T I K + ++F ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK DA + + + EV L ++ E+ P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKFP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDAVD---DEELIELVEMEVRELLAAQDFD-EEAPVVRVSALKALEGD 183
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_LACRJ (Elongation factor Tu OS=Lactobacillus reuteri (strain JCM 1112) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGD 680 + K H+NI IGHVD GK+T T + L AA+ ++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + + VP V + EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITKVL--------------AAKGLAKAEDYADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKTDLVD---DDELVDLVEMEVRDLLSEYDFPGDDVPVVRGSALKALEGD 183
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_LACRD (Elongation factor Tu OS=Lactobacillus reuteri (strain DSM 20016) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGD 680 + K H+NI IGHVD GK+T T + L AA+ ++ YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV+ ++ NK D D + EV L + + + VP V + EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITKVL--------------AAKGLAKAEDYADI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVQYIVVFLNKTDLVD---DDELVDLVEMEVRDLLSEYDFPGDDVPVVRGSALKALEGD 183
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_LACH4 (Elongation factor Tu OS=Lactobacillus helveticus (strain DPC 4571) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 72/200 (36.00%), Postives = 98/200 (49.00%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGD 680 + K H+NI IGHVD GK+T T + L EK A+ S +D E+ERGITI+ A ++ET K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P V + EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTAAITTVLA----------EKGLAKAEDYS-----QIDAAPEEKERGITINTAHVEYETEKRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVNYIVVFLNKCDLVD---DPELIDLVEMEVRDLLTEYDYPGDDIPVVRGSALKALEGD 183
BLAST of FC868683 vs. ExPASy Swiss-Prot
Match: EFTU_LACCB (Elongation factor Tu OS=Lactobacillus casei (strain BL23) GN=tuf PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.942e-21 Identity = 72/200 (36.00%), Postives = 101/200 (50.50%), Query Frame = 3 Query: 90 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---LISGFEGD 680 + K H+NI IGHVD GK+T T I K + E+ +A + YA + D E+ERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D D + EV L + Y + +P + + EGD Sbjct: 9 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLSEKGLAKAQD-------YASI-DAAPEEKERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVDYIVVFLNKTDLVD---DPELIDLVEMEVRELLSEYDYPGDDIPVIRGSALKALEGD 183 The following BLAST results are available for this feature:
BLAST of FC868683 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868683 ID=FC868683; Name=FC868683; organism=Citrus clementina; type=EST; length=732bpback to top |