FC868685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSG1_ORYGL (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza glaberrima GN=WAXY PE=1 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.624e-86 Identity = 158/229 (69.00%), Postives = 184/229 (80.35%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 702 KINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI KYDA+T ++AK L KEALQAE GLPVDR IP+I FIGRLEEQKG D++AAAIP ++E+VQI++LGTGKK EK L+ +E YP K R V KFN PLAH+I+AGAD + +PSRFEPCGLIQL MRYGT ASTGGLVDTV EG TGF MG SV+C+ V Sbjct: 304 KINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVNCKVV 532
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 8.911e-85 Identity = 155/229 (67.69%), Postives = 180/229 (78.60%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 702 KINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDR IP++ FIGRLEEQKG D++AAAIP ++E++QI++LGTGKK E+ L E YP+K R V KFN LAH I+AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V Sbjct: 303 KINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRKIPLVAFIGRLEEQKGPDVMAAAIPLLMEEDIQIVLLGTGKKKFERMLMSAEEKYPDKVRAVVKFNAALAHHIMAGADLLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVV 531
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSG1_HORVU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Hordeum vulgare GN=WAXY PE=1 SV=1) HSP 1 Score: 310.071 bits (793), Expect = 7.544e-84 Identity = 151/230 (65.65%), Postives = 182/230 (79.13%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 702 KINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P DK++ V YD +T ++AK L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQII+LGTGKK EK L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT + ASTGGLVDT+ EG TGF MG SVDC V Sbjct: 297 KINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPTKDKFLAVNYDITTALEAKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEILKEEDVQIILLGTGKKKFEKLLKSMEEKFPGKVRAVVRFNAPLAHQMMAGADLLAVTSRFEPCGLIQLQGMRYGTPCVCASTGGLVDTIVEGKTGFHMGRLSVDCNVV 526
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.195e-83 Identity = 156/231 (67.53%), Postives = 180/231 (77.92%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 702 KINWMKAGILE+D VLTVSP+YA+EL+SG +G ELDNI+R TGI GIVNGMDV EW+P DKYI VKYD ST ++AK L KEALQAEVGLPVDRNIP++ FIGRLEEQKG D++AAAIP ++ E+VQI++LGTGKK E+ L E +P K R V KFN LAH I+AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V Sbjct: 298 KINWMKAGILEADRVLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSRDKYIAVKYDVSTAVEAKALNKEALQAEVGLPVDRNIPLVAFIGRLEEQKGPDVMAAAIPQLMEMVEDVQIVLLGTGKKKFERMLMSAEEKFPGKVRAVVKFNAALAHHIMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIIEGKTGFHMGRLSVDCNVV 528
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSG1_WHEAT (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WAXY PE=1 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.089e-82 Identity = 148/230 (64.35%), Postives = 181/230 (78.70%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 702 KINWMKAGIL++D VLTVSP+YA+EL+SGE +G ELDNI+R TGI GIVNGMDV EW+P+ DK++ V YD +T ++ K L KEALQAEVGLPVDR +P++ FIGRLEEQKG D++ AAIP +K E+VQI++LGTGKK E+ L+ +E +P K R V +FN PLAH ++AGAD + + SRFEPCGLIQL MRYGT ASTGGLVDT+ EG TGF MG SVDC V Sbjct: 309 KINWMKAGILQADKVLTVSPYYAEELISGEARGCELDNIMRLTGITGIVNGMDVSEWDPIKDKFLTVNYDVTTALEGKALNKEALQAEVGLPVDRKVPLVAFIGRLEEQKGPDVMIAAIPEIVKEEDVQIVLLGTGKKKFERLLKSVEEKFPTKVRAVVRFNAPLAHQMMAGADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVDTIVEGKTGFHMGRLSVDCNVV 538
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY1_ARATH (Soluble starch synthase, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=At5g24300 PE=2 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 6.033e-49 Identity = 101/212 (47.64%), Postives = 141/212 (66.51%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648 +N +K I+ SD ++TVS YA E+ + E G L +++ RK+ I GI NG++V EWNP TD++I Y A V + K K ALQ E+GLP+ P+IGFIGRL+ QKG D++ A P + +++Q ++LG+G E + +E Y +K RG FN+P++H I AG D +L+PSRFEPCGL QL+AMRYGT+P+V TGGL DTVE Sbjct: 363 VNVLKGAIVTSDRIITVSQGYAWEITTVEG-GYGLQDLLSSRKSVINGITNGINVDEWNPSTDEHIPFHYSADDVSE-KIKCKMALQKELGLPIRPECPMIGFIGRLDYQKGIDLIQTAGPDLMVDDIQFVMLGSGDPKYESWMRSMEETYRDKFRGWVGFNVPISHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPVVHGTGGLRDTVE 572
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY1_WHEAT (Starch synthase 1, chloroplastic/amyloplastic OS=Triticum aestivum GN=WSSI-2 PE=2 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 7.880e-49 Identity = 102/235 (43.40%), Postives = 149/235 (63.40%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE---------EGFTGFQMGSFSVD 690 +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK + Y + K K LQ E+GLPV ++P+IGFIGRL+ QKG D++ AIP ++E+VQ ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTVE E TG+ +VD Sbjct: 359 VNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPTTDKCLPHHYSVDD-LSGKAKCKAELQKELGLPVREDVPLIGFIGRLDYQKGIDLIKMAIPELMREDVQFVMLGSGDPIFEGWMRSTESSYKDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVETFNPFGAKGEEGTGWAFSPLTVD 591
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSJ (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=Os06g0160700 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.880e-49 Identity = 95/212 (44.81%), Postives = 143/212 (67.45%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648 +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK++ Y + K K LQ E+GLP+ ++P+IGFIGRL+ QKG D++ AIP +++N+Q ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTVE Sbjct: 353 VNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDD-LSGKAKCKAELQKELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVE 562
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY1_ORYSI (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=OsI_021017 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.880e-49 Identity = 95/212 (44.81%), Postives = 143/212 (67.45%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648 +N++K ++ +D ++TVS Y+ E+ + E G L+ ++ RK+ + GIVNG+D+ +WNP TDK++ Y + K K LQ E+GLP+ ++P+IGFIGRL+ QKG D++ AIP +++N+Q ++LG+G E + E Y +K RG F++P++H I AG D +L+PSRFEPCGL QL+AM+YGTVP+V TGGL DTVE Sbjct: 353 VNFLKGAVVTADRIVTVSQGYSWEVTTAEG-GQGLNELLSSRKSVLNGIVNGIDINDWNPSTDKFLPYHYSVDD-LSGKAKCKAELQEELGLPIRPDVPLIGFIGRLDYQKGIDLIKLAIPDLMRDNIQFVMLGSGDPGFEGWMRSTESGYRDKFRGWVGFSVPVSHRITAGCDILLMPSRFEPCGLNQLYAMQYGTVPVVHGTGGLRDTVE 562
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY1_SOLTU (Soluble starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.029e-48 Identity = 99/213 (46.48%), Postives = 144/213 (67.61%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651 +N +K I +D +LTVS Y+ E+ + E G L ++ R++ + GI NG+DV +WNP TD++I Y + + K K LQ E+GLP+ + P+IGFIGRL+ QKG DI+ +AIP ++ +VQ+++LG+G+K E + E L+ +K R FN+P++H I AG D +L+PSRFEPCGL QL+AMRYGT+PIV STGGL DTV++ Sbjct: 352 VNVLKGAIAVADRILTVSQGYSWEITTPEG-GYGLHELLSSRQSVLNGITNGIDVNDWNPSTDEHIASHYSIND-LSGKVQCKTDLQKELGLPIRPDCPLIGFIGRLDYQKGVDIILSAIPELMQNDVQVVMLGSGEKQYEDWMRHTENLFKDKFRAWVGFNVPVSHRITAGCDILLMPSRFEPCGLNQLYAMRYGTIPIVHSTGGLRDTVKD 562 The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bpback to top |