FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_DESRM (Glycogen synthase OS=Desulfotomaculum reducens (strain MI-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.541e-39
Identity = 87/213 (40.85%), Postives = 134/213 (62.91%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            ++++MK G+  SD++ TVS  YA+E+   +  G +LD ++R  K  + GI+NG+D+  +NP TD +I V +   TV D K + KE+LQ  + LP+  ++PV G + RL  QKG +++ + +   +  +VQ++VLG+G+K  E         YP+K      F   LAH I AG+D  L+PS FEPCGL Q+ A+RYG++PIV  TGGL DT++
Sbjct:  197 QVSFMKGGVNYSDILTTVSETYAEEIQLPQ-YGEQLDGLLRHQKRKLHGILNGIDIDIYNPDTDPHICVNFSRETV-DKKHINKESLQKILCLPMRPDVPVFGMVSRLVSQKGLELIGSVLDDILALDVQLVVLGSGEKHYEDMFRSASRRYPDKVSVNIMFGNTLAHRIYAGSDIYLMPSAFEPCGLSQMIALRYGSIPIVRETGGLRDTIQ 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_TREDE (Glycogen synthase OS=Treponema denticola GN=glgA PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 93/218 (42.66%), Postives = 135/218 (61.93%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL-----AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            +IN++KA ++ SDM+ TVSP YA+E+   E  G  +D I+R  +  + GI+NG+D   WNP  D+YI  +Y++ T ++ K   K  LQ   GL +D ++PV G I RL +QKG   L      +A        +Q++VLG+G+   EK+L  L    P   R    +N  L+H+I AG+DF L+PSR+EPCGL Q++++ YGT+PIV  TGGL DTVE
Sbjct:  201 RINFLKAALVSSDMLTTVSPSYAEEIKRPEF-GFRMDGILRYREKELTGILNGVDTSIWNPSKDEYIPYRYNSKT-LEEKEKNKSVLQERFGLEIDISVPVFGMISRLVDQKGISELFGPMYGSAFKICSDIKLQMVVLGSGESWCEKELNFLSQRLPN-FRCYIGYNEELSHLIEAGSDFFLMPSRYEPCGLNQMYSLLYGTLPIVRKTGGLADTVE 415          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 88/213 (41.31%), Postives = 134/213 (62.91%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            K++++K GI  +D + TVSP YA+E+++ + +G  LD ++  R   + GI+NG+D +EW+P  D+++  +Y A   +  K   K ALQ    LP    IP++G +GR+  QKG D+L  AA P       Q++V+G+G   +E+    L   YPE       ++ PLAH + AGAD  ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV
Sbjct:  200 KLSFIKGGIGFADHITTVSPSYAREILTPQ-QGFGLDGLLNHRAGVLTGILNGVDYREWDPGKDRHLVARYSADD-LSGKARCKAALQHHFKLPCHSGIPLLGHVGRMVAQKGVDLLLKAAEPLLAAGEAQLVVVGSGDATLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTV 410          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 90/212 (42.45%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            +N+MK G+  SD + TVSP YAQE +     G  L+ ++  +K  ++G+ NG+D   +NP TD ++   + +  + + K   K  LQ  + L VD  IP+IG + RL EQKG D++A  +   ++E +Q++VLGTG    E+   Q  I YPE+      F+  LA  I  G+DF L+PS FEPCGL QL A+RYGTVPIV  TGGL DT++
Sbjct:  198 VNYMKGGLNFSDYITTVSPTYAQE-IQDPFFGEGLEGVLSRKKKQLQGVTNGIDDSVYNPQTDIHLFKNFSSENLRNKKDN-KLGLQERLNLAVDAKIPMIGMVTRLVEQKGLDLVANQLEKLMEEEIQLVVLGTGDHQYEEIFRQAAIKYPERISTNLFFDEVLAQQIYGGSDFFLMPSLFEPCGLGQLIALRYGTVPIVRETGGLKDTIQ 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOSL (Glycogen synthase 1 OS=Geobacter sulfurreducens GN=glgA1 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.334e-39
Identity = 94/233 (40.34%), Postives = 139/233 (59.66%), Query Frame = 1
Query:   22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAV 702
            N +K G+  + ++ TVS  YA+E+ + E  G  LD ++R     + GI+NG+D +EWNP TD +I   Y  S  +  K L K  +Q   GLP   ++P+ G +GRL +QKG DILA AI   +  +VQ+++LG G+         +   YPEK      +N  L+H I AG+DF ++PS FEPCGL Q++++RYGT+PIV +TGGL D+V    E+  TG     +S D +A+
Sbjct:  209 NLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRARSADLVGILNGVDYEEWNPETDPHIVANYSRSD-LSGKKLCKRDVQRFFGLPERDDVPLFGLVGRLVKQKGIDILAEAIHRILALDVQVVMLGAGEPWSHFYFGDVRNEYPEKFGLYIGYNNGLSHRIEAGSDFFVMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVENFDEQNLTGNGFKFWSHDADAL 439          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.660e-39
Identity = 93/213 (43.66%), Postives = 129/213 (60.56%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            IN+MK  I+ SD V TVS  YA E +     G  LD +IR+   K  GI NG+D   WNP TDKY+   Y    + D K   K+ALQ   GL  ++N+PV   + RL E KG +++   +  F+  E+VQ+++LGTG    E+  +  E  +P+K +    +N   +H I AGADF+++PS FEPCG+ QL AMRYGT+P+V  TGGL DTV+
Sbjct:  197 INFMKGAIVFSDRVTTVSKTYADE-IKYSFFGEGLDGVIRQYHYKISGITNGIDTTIWNPETDKYLFKNYSLKNIKD-KDENKKALQRMYGLE-EKNVPVFAMVTRLVENKGLELVRYIMDEFLTTEDVQVVILGTGDYSYEEMFKYYEWKFPDKLKANIYYNNEESHKIYAGADFLMMPSIFEPCGISQLIAMRYGTIPVVRETGGLRDTVQ 406          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 87/224 (38.84%), Postives = 134/224 (59.82%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA--KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-VEEGFTGFQMG 675
            ++++K+G+  SD + TVSP YA+E+ +    G  ++ ++  R   + GI+NG D + WNP  D ++     A T  DA  K   K ALQAE+GL    + P++  + RL + KG D++ AA+P+ +K   Q+ V+GTG +P+E         +P +      ++ PLAH ++AG D +L+PSRFEPCGL Q +A RYGTVP+  +TGGL DT V+ G+     G
Sbjct:  203 LSFLKSGLFYSDRITTVSPRYAKEIQTPAF-GCGMEGLLAHRAADLTGILNGADYEVWNPAADTHLD---HAFTPGDAAGKACNKAALQAELGLSQAPDAPLMVIVSRLNDHKGMDLVLAALPNILKMGAQVAVVGTGDRPLEDGFRAAAAAHPTQVAARIGYSEPLAHRMMAGGDMLLMPSRFEPCGLTQFYAFRYGTVPVAHATGGLADTLVDTGYDTLMTG 422          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_HELMI (Glycogen synthase OS=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 90/214 (42.06%), Postives = 133/214 (62.15%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            ++N+MKAG++ +D++ TVS  YA+E+ + E  G  LD ++R   + + GIVNG+DV+ ++P TD +I   Y A  + + K   K  LQ + GLPV    P++G + RL +QKG D+         +E++Q++V+G G    E    +L+  +PEK      F+ PLA  +  G+DF L+PSRFEPCGL QL A RYG +PIV STGGL DTV +
Sbjct:  202 QVNFMKAGLVFADLINTVSRTYAEEIQTSE-YGWGLDGLLRLRHSDLFGIVNGIDVEVYDPATDPHIPHHYSADNI-EGKKRNKAELQRQFGLPVSE-APLLGLVHRLVDQKGIDLFEGIEEALFREDLQLVVVGQGDPRYEGLFRRLKQHFPEKVGLFIGFDTPLAQRVYGGSDFFLMPSRFEPCGLGQLIAFRYGAIPIVRSTGGLADTVTD 412          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 90/236 (38.14%), Postives = 134/236 (56.78%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVD 690
            ++++MKAG+  +D + TVSP YA+E+ + E +G  L+ ++  R   + G++NG+D Q WNP  D  I   Y ++TV   K   K ALQ  +GL    +  + G + RL EQKG ++L  AI        Q+++LG+G K +E+        YP+       ++   AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+
Sbjct:  203 QVSFMKAGLYFADKITTVSPTYAKEIQTYE-QGCGLEGLLADRHNDLYGVLNGVDPQIWNPKKDSLIATNYSSTTVATGKAKCKLALQQMMGLAEKEDALLFGIVTRLTEQKGLNLLVEAIGEITSRGGQVVLLGSGDKALEEVFLAAAKKYPKSIAVQIGYDEEQAHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE 437          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CLOBB (Glycogen synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.392e-39
Identity = 93/233 (39.91%), Postives = 136/233 (58.37%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVD 690
            + +MK  I  SDM+ TVS  YA+E+ + E  G  LD ++R+    ++GI+NG+D  E+NP  D  I   YD + + D K   K  LQ+E+GL V+ NIP+I  + RL  QKG D+L       ++ ++Q++++GTG K  E   + L+  Y  K     +F+  LAH   A +D  L+PS FEPCGL QL A+RYG++PIV  TGGL DT+        EG  GF   +++ D
Sbjct:  199 VGFMKGAINYSDMITTVSYSYAEEIKTPEF-GERLDWLLREKSYMLRGILNGIDYDEFNPKNDSLINKNYDVNNIND-KYENKRNLQSELGLSVNENIPMIAMVTRLTSQKGLDLLVHISERLLQNDIQLVIVGTGDKHYEDHFKWLDYKYGNKVSANIRFDNNLAHKAYAASDMFLMPSLFEPCGLGQLIALRYGSIPIVRETGGLKDTIRAYNEYTGEG-NGFSFYNYNAD 428          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_DESRM2.541e-3940.85Glycogen synthase OS=Desulfotomaculum reducens (st... [more]
GLGA_TREDE4.334e-3942.66Glycogen synthase OS=Treponema denticola GN=glgA P... [more]
GLGA_THISH4.334e-3941.31Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_ALKMQ4.334e-3942.45Glycogen synthase OS=Alkaliphilus metalliredigens ... [more]
GLGA1_GEOSL4.334e-3940.34Glycogen synthase 1 OS=Geobacter sulfurreducens GN... [more]
GLGA_FINM25.660e-3943.66Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_MAGSA7.392e-3938.84Glycogen synthase OS=Magnetospirillum magneticum (... [more]
GLGA_HELMI7.392e-3942.06Glycogen synthase OS=Heliobacterium modesticaldum ... [more]
GLGA_FRATN7.392e-3938.14Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_CLOBB7.392e-3939.91Glycogen synthase OS=Clostridium botulinum (strain... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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