FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PHOPR (Glycogen synthase OS=Photobacterium profundum GN=glgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.654e-39
Identity = 88/212 (41.51%), Postives = 128/212 (60.38%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSG-EDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDA--KPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            I+ +KAG+  +D V  VSP+YA EL++     G+E D   R   + GI+NG D  +WNP TD YI  K+ A+ V  A  K   +  LQ +V LP + ++PV G + RL EQKG   L   +  F+  +VQ++++GTG   +   L  +   + +K   V  ++ PLAH + AG DF ++PS FEPCGL Q++++ YGT+PIV S GGL DTV
Sbjct:  214 ISMLKAGVAYADKVNAVSPNYASELLTHLGSHGMEADFQNRAKDLYGIINGCDYDDWNPETDVYIKQKFKANKVSLARGKKACRRDLQKQVNLP-EVDVPVYGMVCRLTEQKGLHYLIPVLEDFLLNDVQVVIVGTGDPTLASALRDISEQHSDKFAFVETYSNPLAHCVEAGVDFFMMPSEFEPCGLNQMYSLAYGTLPIVRSVGGLKDTV 424          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_NITEC (Glycogen synthase OS=Nitrosomonas eutropha (strain C91) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.654e-39
Identity = 92/211 (43.60%), Postives = 127/211 (60.19%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            ++++KAGI  SD + TVSP YA+E +  E  G  L  ++ K    I GIVNG+D   WNP TD Y+  KY  S  + AK   K ALQ  +GL  ++ IP+ G + RL  QKGSDI+    P       Q+ +LG+G   +E+QL  L   +P K      ++  L+H+I AG D  L+PSRFEPCGL Q+++  YGT P+V +TGGL+DTV
Sbjct:  213 LSFLKAGIYYSDHISTVSPGYARE-IQQEPLGFGLQGLLAKRSDDITGIVNGIDTAIWNPATDPYLVKKY-TSRNLSAKAANKLALQQTMGLENNQAIPLFGTVSRLTHQKGSDIMLQVAPMLADLPAQLALLGSGDALLEQQLAALAQAFPTKIAVRIGYDEALSHLINAGTDCFLMPSRFEPCGLNQMYSQHYGTPPVVHATGGLMDTV 421          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_MARMS (Glycogen synthase OS=Marinomonas sp. (strain MWYL1) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.654e-39
Identity = 90/214 (42.06%), Postives = 132/214 (61.68%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            + + +KAG++ ++ V TVSP YA+E+++ E  G  LD  +R  +  + GI+NG+D  +W+P  D  I   YD  T +  K   K AL  E GL  D N PV G + RL EQKG D++   +P  +++  +++VLG+G K +E Q  +L+  YP +      +    +H + AG D +LIPSRFEPCGL QL+A++YGT+PIV  TGGL DTV E
Sbjct:  200 RFSGLKAGLVYANAVTTVSPTYAKEILTPE-YGDGLDGALRAMQDRLVGILNGVDYNQWSPEKDTLIPHNYDIDT-LSQKQANKLALLQENGLSEDLNQPVFGVVSRLTEQKGLDLVLQVMPALLEKGARLVVLGSGDKYLESQYLELQNNYPNQVSVRIGYFEDYSHRLQAGIDALLIPSRFEPCGLTQLYALKYGTLPIVRQTGGLADTVFE 411          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_EXISA (Glycogen synthase OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=glgA PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.654e-39
Identity = 89/212 (41.98%), Postives = 128/212 (60.38%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            +N+MKAGI+ SD + TVSP Y  E++     G  LD  +R     ++GI+NG+D+   +P TD+ I   Y+  T  + K + K ALQ  +GL V  ++ +IGF+ RL +QKG D++        +   Q   LG+G+   E  + ++   +P K      F+I LAH+I AG+D  L+PSRFEPCGL QL +MRYGT+PIV  TGGL DTV+
Sbjct:  199 VNYMKAGIVHSDQITTVSPSYRDEIMEPY-YGEGLDGALRYRAVDVRGILNGIDLATNDPNTDQRIAETYNLDTYKEGKVVNKRALQERLGLEVRDDVMLIGFVSRLVDQKGLDLINGVREELGQLPCQFAFLGSGQPEYEGIVHEMTAAHPGKVGSYIGFDIELAHLIYAGSDAFLMPSRFEPCGLSQLISMRYGTLPIVRETGGLRDTVK 409          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_AERHH (Glycogen synthase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.647e-38
Identity = 81/210 (38.57%), Postives = 131/210 (62.38%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDK-GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            +N +K G+L +D +  VSP+YA EL++     G+      R   ++GI+NG D Q+W+P  D ++   YD   +   K + K++LQ E GLPV  ++P+ G + RL EQKG  +L   +  F+   VQ++++G+G   +  QL+ L   +P++   +  ++  LAH++ AGADF L+PS FEPCGL Q++++ YGT+P+V + GGL DTV
Sbjct:  206 VNLLKCGVLYADKINAVSPNYASELLTHLGAHGMASIFQQRAADLRGILNGCDYQDWDPAFDDFLPATYDVDNLA-GKHICKQSLQQETGLPVV-DLPIYGMVCRLTEQKGVHLLLPVLDKFLHHKVQVVIVGSGDPSLAAQLQTLAQQFPDRLAFINTYDDRLAHLVEAGADFFLMPSLFEPCGLNQMYSLAYGTLPLVRAVGGLKDTV 413          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_ACIBL (Glycogen synthase OS=Acidobacteria bacterium (strain Ellin345) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.647e-38
Identity = 87/213 (40.85%), Postives = 132/213 (61.97%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTG-IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            K+N++K  ++ +D V TVS  YA E+ + E  G  L+ ++R ++G + GI+NG+D  EW+P TD++I  K+ A ++  AK   K  L  E GLP +  +PV+G + R   QKG D++        +E    +VLG+G K  E  + +L   YP +      ++  LAH I AG+D  L+PSR+EPCGL Q++++RYGTVPIV +TGGL DT+E
Sbjct:  199 KVNFLKGALVYADFVTTVSRRYALEIQTAE-YGFGLEGVLRGRSGTVAGILNGVDYSEWSPETDRFIAAKFSADSLA-AKAQDKADLLREFGLP-ETKLPVVGIVSRFAAQKGFDLIQQVGDRLAREEAIFVVLGSGDKTYEDLMRRLSKQYPNRFAVRVAYDNALAHKIEAGSDMFLMPSRYEPCGLNQIYSLRYGTVPIVRATGGLDDTIE 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPB (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB18) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38
Identity = 88/211 (41.71%), Postives = 130/211 (61.61%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            I +MK+G+  SD + TVSP YA E + G   G+ LD ++R+    + GI+NG+D + WNP TDK I   YD   +  A+    ++++    L +D +  ++G I RL  QKG D+L  A+P  + E +Q+ +LG G   +E++ +     YP +   +  ++  LAH+I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  200 IGYMKSGLQLSDRITTVSPAYALE-IQGPQAGMGLDGLLRQRAAQLTGILNGIDDKVWNPATDKRITATYDLDHLA-ARRANTQSVRELFDLSLDPDRLLLGVISRLSWQKGLDLLLEALPVLLAEGIQLALLGAGDPELEERFKSAAQAYPGQIGVMIGYDEDLAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLSDTV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_OPITP (Glycogen synthase OS=Opitutus terrae (strain DSM 11246 / PB90-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38
Identity = 88/212 (41.51%), Postives = 132/212 (62.26%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            +IN+MKAGIL +D V TVSP YA+E+ + E  G  LD ++  R++ + G++NG+D + WNP TD  +  +Y  + +   K + +  L    G   D + PV G + RL EQKG D++ A    F+ ++ ++IVLG G+   E  ++ L    P K    AK +  ++H+I AG+DF L+PS FEPCGL Q+++  YGT+PIV+  GGLVDTV
Sbjct:  203 QINFMKAGILFADRVTTVSPRYAEEIQTPEF-GCGLDGVVQTRESDLVGLLNGVDTKVWNPATDPLLPARYSRADLA-GKRVCRAELLKRFGFAPDFDGPVFGMVCRLAEQKGVDLVLANQGFFLSQSCRLIVLGAGELRYETAMKALAARAPNKIALSAKLDEAMSHLIEAGSDFFLMPSLFEPCGLNQMYSQIYGTLPIVSRVGGLVDTV 412          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_FRAP2 (Glycogen synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38
Identity = 92/236 (38.98%), Postives = 131/236 (55.51%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVD 690
            ++++MKAG+  +D + TVSP YA+E+ S E +G  L+ ++  R   + G++NG+D Q WNP  D  I   Y  +T    K   K ALQA  GL    +  V G + RL EQKG ++L  AI        Q+++LG+G K +E+         P+       ++   AH IIAG+D IL+PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+
Sbjct:  203 QVSFMKAGLYFADKITTVSPTYAKEIQSYE-QGCGLEGLLADRHNDLYGVLNGVDPQVWNPKKDTLIEANYSVTTANVGKAKCKTALQAMTGLAKKEDAVVFGIVTRLTEQKGLNLLIEAIGEITSRGGQVVLLGSGDKALEEAFLAAAKKSPKSIAVQIGYDEEQAHRIIAGSDVILVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE 437          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_DESVM (Glycogen synthase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=glgA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.151e-38
Identity = 95/227 (41.85%), Postives = 130/227 (57.27%), Query Frame = 1
Query:   22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKY--DASTVMDAKPLLKEALQAEVGL-PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMG 675
            N +KAGI  +DMV TVSP YA+E++ G   G  L+ I  +R+  + GI+NG D   WNP  DK++  +Y  D       K   K AL  E+GL P   + PV+GFIGRL  QKG D+L   +P  ++ NV +I+LG G    E +   L   Y  +   +  +   LAH I AG+D  L+PSR+EPCGL Q++A+RYGT P+  + GGL DT+        TGF  G
Sbjct:  205 NLLKAGIAYADMVTTVSPSYAREIL-GPAYGCGLEGILQVRQHALHGILNGADYGIWNPAQDKFLPCRYGPDDPQGFAGKQRCKAALLDELGLAPELAHRPVLGFIGRLRGQKGIDLLLDIVPRLMERNVGVIILGEGNLAHEARALDLMETYRGRLCAIVGYTEDLAHRIQAGSDIFLMPSRYEPCGLTQMYALRYGTPPVATAVGGLRDTIVPWPSPEATGFTFG 430          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_PHOPR9.654e-3941.51Glycogen synthase OS=Photobacterium profundum GN=g... [more]
GLGA_NITEC9.654e-3943.60Glycogen synthase OS=Nitrosomonas eutropha (strain... [more]
GLGA_MARMS9.654e-3942.06Glycogen synthase OS=Marinomonas sp. (strain MWYL1... [more]
GLGA_EXISA9.654e-3941.98Glycogen synthase OS=Exiguobacterium sp. (strain A... [more]
GLGA_AERHH1.647e-3838.57Glycogen synthase OS=Aeromonas hydrophila subsp. h... [more]
GLGA_ACIBL1.647e-3840.85Glycogen synthase OS=Acidobacteria bacterium (stra... [more]
GLGA_RHOPB2.151e-3841.71Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_OPITP2.151e-3841.51Glycogen synthase OS=Opitutus terrae (strain DSM 1... [more]
GLGA_FRAP22.151e-3838.98Glycogen synthase OS=Francisella philomiragia subs... [more]
GLGA_DESVM2.151e-3841.85Glycogen synthase OS=Desulfovibrio vulgaris (strai... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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