FC868685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY2_SOLTU (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=SS2 PE=1 SV=3) HSP 1 Score: 192.2 bits (487), Expect = 2.293e-48 Identity = 99/215 (46.05%), Postives = 145/215 (67.44%), Query Frame = 1 Query: 22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648 N AG+ +D V+TVS Y+ EL + + G L II + ++GIVNG+D +EWNP D ++ + Y T+ KP K ALQ E+GLPV ++P+IGFIGRL+ QKG D++A A+P + ++VQ+++LGTG++ +E+ L Q E + +K RG F++ +H I AGAD +L+PSRFEPCGL QL+AM+YGT+P+V + GGL DTV+ Sbjct: 482 NIFAAGLKTADRVVTVSHGYSWELKTSQG-GWGLHQIINENDWKLQGIVNGIDTKEWNPELDVHLQSDGYMNYSLDTLQTGKPQCKAALQKELGLPVRDDVPLIGFIGRLDPQKGVDLIAEAVPWMMGQDVQLVMLGTGRRDLEQMLRQFECQHNDKIRGWVGFSVKTSHRITAGADILLMPSRFEPCGLNQLYAMKYGTIPVVHAVGGLRDTVQ 695
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSG2_PEA (Granule-bound starch synthase 2, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 1.486e-47 Identity = 100/215 (46.51%), Postives = 141/215 (65.58%), Query Frame = 1 Query: 22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648 N AG+ +D ++TVS YA EL + E G L NII ++ K GIVNG+D ++WNP D Y+ Y+ T+ K K ALQ E+GLPV ++P+I FIGRL+ QKG D++A AIP + +VQ+++LGTG+ +E+ L++ E + +K R F++ +AH I AG+D +L+PSRFEPCGL QL+AM YGTVP+V GGL DTV+ Sbjct: 467 NIFAAGLKTADRIVTVSHGYAWELKTSEG-GWGLHNIINESDWKFRGIVNGVDTKDWNPQFDAYLTSDGYTNYNLKTLQTGKRQCKAALQRELGLPVREDVPIISFIGRLDHQKGVDLIAEAIPWMMSHDVQLVMLGTGRADLEQMLKEFEAQHCDKIRSWVGFSVKMAHRITAGSDILLMPSRFEPCGLNQLYAMSYGTVPVVHGVGGLRDTVQ 680
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY21_ORYSJ (Soluble starch synthase 2-1, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-1 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 2.535e-47 Identity = 106/216 (49.07%), Postives = 141/216 (65.28%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648 +N AGI +D +LTVS YA EL + E G L II ++ K GIVNG+D +WNP D ++ Y TV K K ALQ E+GLPV ++PVI FIGRL+ QKG D++A A+P ++VQ+I+LGTG++ +E L +LE + ++ RG F+I LAH + AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTVE Sbjct: 463 LNIFAAGIKAADRLLTVSHGYAWELKTAEG-GWGLHGIINESDWKFQGIVNGIDTTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELGLPVRGDVPVIAFIGRLDHQKGVDLIAEAMPWIAGQDVQLIMLGTGRQDLEDTLRRLESQHYDRVRGWVGFSIRLAHRMTAGADILLMPSRFEPCGLNQLYAMMYGTVPVVHAVGGLRDTVE 677
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_THEYD (Glycogen synthase OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=glgA PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 5.647e-47 Identity = 100/224 (44.64%), Postives = 138/224 (61.61%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKT--GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS 684 +N++K G+ +D++ TVSP YA+E+++ D G LD ++RK + GI+NG+D + WNP D +I KY + D K KE L A G+ P+I FIGR+ QKG DI+ A+P+ IK + I GTG+ E ++ +L+ YP K F+ LAH I AGAD +L+PSR+EPCGL QL AMRYGT+PI TGGL DTVE+ TGF +S Sbjct: 216 VNFLKGGLFNADIITTVSPTYAKEILT-PDYGAGLDGVLRKRKENLVGIINGIDYKIWNPEEDPFIAKKYGLQNIND-KQKNKEDLIALAGINSSLQDPIIAFIGRMVYQKGIDIVVDAMPNLIKNGISFIFEGTGESYYEHKIRELQNSYPSKVFAFIGFDEALAHKIYAGADSLLVPSRYEPCGLSQLIAMRYGTIPICRKTGGLSDTVEDKVTGFLFSEYS 437
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_FERNB (Glycogen synthase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glgA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.643e-46 Identity = 103/230 (44.78%), Postives = 152/230 (66.09%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-----------GFTGF 666 KIN++K GI+ SD++ TVSP YA+E + ++ G +L+ ++R + + GI+NG+D +E+NPLTD I V YD +T+ + K K+ LQ E+GLP +R++P+ G I RL +QKG DI+A + + ++Q ++LGTG++ E ++L YPEK KF+I LA I AG D L+PSR+EPCGL Q++++RYGT+PIV TGGL DTV+E GF GF Sbjct: 203 KINFLKGGIIFSDIINTVSPTYAKE-IQQKEYGEKLEGVLRARSSDLYGILNGIDYEEFNPLTDNKIYVNYDLNTI-EKKKENKKLLQKELGLP-ERDVPMFGMINRLVDQKGLDIMAEIMDYVSLFDIQFVLLGTGEEKYENMFKKLGEKYPEKYSINLKFDIVLAQKIYAGCDMFLMPSRYEPCGLGQMYSLRYGTIPIVRYTGGLADTVKEYNPETKEGNGFGFEGF 429
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_ANADF (Glycogen synthase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=glgA PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.643e-46 Identity = 93/223 (41.70%), Postives = 151/223 (67.71%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 678 ++N++KAG++ +D + TVSP YA+E+ + + GV LD ++R + GI+NG+DV+EW+P TD+++ +Y A+ + K K ALQ E+GLP ++P++ IGRL EQKG D++ AA+ + ++Q+++LGTG+ +E+ + P++ F+ LAH + AGAD L+PSRFEPCGL Q++++RYGT+P+V + GGL DTVE+ F G+ G+ Sbjct: 196 QLNFLKAGLVFADALTTVSPTYAREIATPQG-GVGLDALLRHRARDLHGILNGIDVEEWDPATDRHLPARYSAAD-LSGKAACKSALQRELGLPERPDVPLVAMIGRLAEQKGLDLVVAALGELLARDLQLVLLGTGRPELEEAFRRAARERPDRMAARIGFDEGLAHRMEAGADLFLMPSRFEPCGLNQMYSLRYGTIPVVRAVGGLEDTVED-FDGWSRGT 415
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_THELT (Glycogen synthase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glgA PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 3.660e-46 Identity = 98/214 (45.79%), Postives = 142/214 (66.36%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651 +IN++K GIL SD+V TVSP YAQE+ + E G +LD ++R + GI+NG+D E+NP TDK I V YD + + K + K LQ E+ L V ++P+IG I RL +QKG D++ + + + ++Q +VLGTG K E+ + +E YP+K KF++ LA I A +D L+PSR+EPCGL Q++++RYGTVPIV TGGL D+V+E Sbjct: 202 QINFLKGGILFSDIVTTVSPTYAQEIQT-EQFGEKLDGVLRLRAEDLYGILNGIDYSEYNPATDKRIYVNYDIDHI-EKKKMNKSELQKELNLQVRDDVPLIGMINRLVDQKGLDLIEKIVDYMMMFDIQFVVLGTGDKKYEEFFKNIEKKYPQKISSNMKFDVDLAQKIYAASDMFLMPSRYEPCGLGQMYSLRYGTVPIVRYTGGLADSVKE 413
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_THEM4 (Glycogen synthase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=glgA PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.780e-46 Identity = 98/214 (45.79%), Postives = 140/214 (65.42%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651 KIN++K GIL SD++ TVSP YA E+ + E G +LD ++R + G++NG+D E+NP TDK I V Y + D K K LQ E+GLP DR IP+IG I RL +QKG DIL+ + + + ++Q ++LGTG + E+ ++ + +P+ KF+I LA I A +D L+PSR+EPCGL Q++++RYGT+PIV TGGL DTV E Sbjct: 198 KINFLKGGILYSDIINTVSPTYANEIQTKE-YGEKLDGVLRLRSADLYGVLNGIDYDEYNPETDKRIFVNYSLDNI-DKKYENKVRLQKELGLPEDRRIPMIGMITRLVDQKGLDILSEVLRYIVNYDIQFVILGTGDEKYEEMFKKAQQEFPKNVSANVKFDINLAQKIYAASDMFLMPSRYEPCGLGQMYSLRYGTIPIVRYTGGLADTVLE 409
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY23_ORYSI (Soluble starch synthase 2-3, chloroplastic/amyloplastic OS=Oryza sativa subsp. indica GN=SSII-3 PE=1 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.065e-45 Identity = 100/214 (46.73%), Postives = 141/214 (65.89%), Query Frame = 1 Query: 22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645 N AG+ +D V+TVSP Y EL + E G L +IIR+ K GIVNG+D +EWNP D ++ Y +++ KP K ALQ E+GL V ++P+IGFIGRL+ QKG DI+ A+P ++VQ+++LG+G++ +E L++ E + K RG F++ +AH I AGAD +++PSRFEPCGL QL+AM YGTVP+V + GGL DTV Sbjct: 525 NIFGAGLKMADRVVTVSPGYLWELKTTEG-GWGLHDIIRENDWKMNGIVNGIDYREWNPEVDVHLQSDGYANYTVASLDSGKPRCKAALQRELGLEVRDDVPLIGFIGRLDGQKGVDIIGDAMPWIAGQDVQLVLLGSGRRDLEVMLQRFEAQHNSKVRGWVGFSVKMAHRITAGADVLVMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV 737
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.065e-45 Identity = 97/223 (43.50%), Postives = 144/223 (64.57%), Query Frame = 1 Query: 16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 678 ++++MKAG+ +D + TVSP YA+E+++ E G LD ++R + GI+NG+DV W+P D ++ + A + K K ALQ EVGLPV +PV G + RL EQKG D++AAA+P + +VQ+++LG+G E+ + +P++ F+ LAH I AGAD L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+ F GF G+ Sbjct: 197 QLSFMKAGLAFADALTTVSPTYAREILTPEG-GASLDALLRHRARDLHGILNGIDVHAWDPARDPHLPAHFGAGD-LTGKAACKAALQREVGLPVRPEVPVAGLVTRLAEQKGIDLVAAALPALLARDVQVVLLGSGDAAYEQAFARAAREHPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGT 416 The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bpback to top |