FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_AQUAE (Glycogen synthase OS=Aquifex aeolicus GN=glgA PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.482e-34
Identity = 86/213 (40.38%), Postives = 124/213 (58.22%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +N+MK GI+ SD++ TVSP YA+E+ + ++ G  L+ +++K   K  GI+NG+D + WNP  DKYI   Y        K   KE L  E+G+  ++  P+I FI R   QKG +++        K N   + LGTG+   E     +  +Y +  +  A+FN   A  + A +DFIL+PS FEPCGL Q+  MRYG VPIV  TGGL DTV++
Sbjct:  191 VNFMKGGIVFSDLITTVSPTYAKEIQT-QEYGYGLEGVLKKYSYKLRGILNGIDYEVWNPEKDKYIYQNYSLRNY-SKKFKNKEFLSKELGIEAEK--PLISFINRFTHQKGVELILNCAEEMSKLNANFVFLGTGE--YENAFLDVSKIY-KNFKVFAEFNEGFARKLYASSDFILMPSYFEPCGLTQMIGMRYGCVPIVRKTGGLRDTVKD 396          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_RHILO (Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34
Identity = 85/211 (40.28%), Postives = 125/211 (59.24%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            + ++KAG+  +  + TVSP YAQE+ S E  G+ LD +I  R + + GIVNG+D   W+P TDK++   Y A+T+    P  + A++   GL  D + P++  I RL  QKG DILA  I   +    ++ +LG+G   +E  L      +  +   V  ++  L+H +  G D I+IPSRFEPCGL QL+ +RYG VP+VA TGGL DT+
Sbjct:  197 VGFLKAGLQAAWAITTVSPTYAQEIRSPEF-GMGLDGLINMRSSDLYGIVNGIDTAIWDPETDKHLVSNYTATTLKARAPN-RAAVEERFGLDRDDS-PIVCVISRLTWQKGMDILATVIDGIVATGARLAILGSGDAGLEGALLAAAARHRGRIGVVIGYDEGLSHTMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGLADTI 404          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP3 (Glycogen synthase OS=Klebsiella pneumoniae (strain 342) GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34
Identity = 76/216 (35.19%), Postives = 126/216 (58.33%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +I+++KAG+  +D +  VSP YA+E+   +     ++ ++R+      + GI+NG+D   W+P  D  + ++YD  T ++ K   K  LQ  +GL VD   P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P K      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQ-YAYGMEGLLRQRHHEGRLSGILNGVDDGIWSPQNDLLLPMRYDRDT-LEEKAENKRQLQIAMGLKVDDKAPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGKVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_ERWCT (Glycogen synthase OS=Erwinia carotovora subsp. atroseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 7.160e-34
Identity = 79/216 (36.57%), Postives = 122/216 (56.48%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR----KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +I+++KAG+  +D + TVSP YA E+      G  ++ +++    +  + GI+NG+D   WNP  D  +   Y    + + K   K  LQ  +GL VD   PV   + RL  QKG DI  +AIP  +++  Q++VLG G   +++        Y  +      ++   +H II GAD I++PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISYLKAGLFYADHITTVSPTYAHEITLPA-YGYGMEGLLKTREEEGRLSGILNGVDETIWNPTHDPLLTNHYSREALAN-KAENKRHLQTAMGLKVDDKAPVFAIVSRLTSQKGLDIALSAIPDLLEQGGQLVVLGAGDADLQEGFLAAAAEYHGQVGVQIGYHEAFSHRIIGGADVIMVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_THECA (Glycogen synthase OS=Thermus caldophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 79/218 (36.24%), Postives = 127/218 (58.26%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTG 663
            ++N MK GI+ +  V TV P YA+E+ + E  G+ LD ++R+    ++GI+NG+D + ++P  D Y+   Y        K   KE  +   GL      PV+ ++GRL+ QKG D++  A+P  ++   ++ V G G   +++   + E   PE  R +  ++  +A +  AGA+ +L+PSRFEPCGL+Q+ A RYGT P+  + GGL DTVE+G  G
Sbjct:  174 RVNLMKGGIVFARRVTTVRPSYAEEIQTPEF-GMGLDGVLRRHAGKLRGILNGLDTEVFDPGKDPYLPAPYTREDP-SGKARAKEVFRERTGL----RPPVLAYVGRLDYQKGLDLVLKALPRLLEMGFRLYVQGVGDGGLQEAFLRAEEENPEGVRFLPAYDEAMARLAYAGAEAVLVPSRFEPCGLVQMIASRYGTPPVARAVGGLKDTVEDGRAG 385          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_NOVAD (Glycogen synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=glgA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 82/211 (38.86%), Postives = 121/211 (57.35%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            + ++KAG+  +  + TVSP YA+E+ + E  G+ L+ ++   G  + GIVNG+D  +WNP TD  +  ++   ++   +   K AL+AE  L  D   P+   I RL  QKG D+L   I H +    ++ +LG+G K ME         +P K      ++  L+H + AG D IL+PSRFEPCGL QL+ + YG VP+VA TGGL DTV
Sbjct:  202 VGYLKAGLEAASAITTVSPTYAREIRTPEF-GMGLEGLVVSRGNRVSGIVNGIDTAQWNPETDPALAARFGVKSLA-RRVTNKRALEAEFALEADDG-PLFVVITRLTWQKGIDVLLECIDHLVGIGGRLALLGSGDKAMENAFHAAATRHPGKVGVRIGYDEALSHRMQAGGDAILVPSRFEPCGLTQLYGLAYGCVPVVARTGGLADTV 409          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_KLEP7 (Glycogen synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=glgA PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.351e-34
Identity = 76/216 (35.19%), Postives = 126/216 (58.33%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +I+++KAG+  +D +  VSP YA+E+   +     ++ ++R+      + GI+NG+D   W+P  D  + ++YD  T ++ K   K  LQ  +GL VD   P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P K      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQ-YAYGMEGLLRQRHHEGRLSGILNGVDDGIWSPQNDLLLPMRYDRDT-LEEKAENKRQLQIAMGLKVDDKAPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGKVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVAD 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_SALTI (Glycogen synthase OS=Salmonella typhi GN=glgA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 74/216 (34.26%), Postives = 129/216 (59.72%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +++++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    I+NG+D + WNP +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +A     ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QLSFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGILNGVDEKIWNPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTNQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQAGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CHLCV (Glycogen synthase OS=Chlamydophila caviae GN=glgA PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 88/224 (39.29%), Postives = 129/224 (57.59%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII-RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL-------KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQLEQLE--ILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 666
            +K  +  SD + TVSP YAQE+++        D I+ R+    GI+NG+D Q WNP TD  + V Y +  ++DA  +L       K AL  ++GL  + + P++  I R+ EQKG + + AAI H ++    ++++GT   P ++++   L+  +      R +  +N PLA ++   AD I IPS FEPCGL QL  MRYGTVP+V STGGL DTV  G  GF
Sbjct:  196 LKGALYCSDYITTVSPTYAQEILNDYSDYEMHDAIMARRHVFCGILNGIDEQIWNPETDASLAVNY-SKDLLDAPDVLFTKKEENKNALYEKLGLSYEYS-PLMCIISRIVEQKGPEFMKAAILHAMENGYALVIVGTCYDPEIQRKFTNLQESLTTSPNIRIILDYNDPLARLVYGAADMICIPSHFEPCGLTQLIGMRYGTVPLVRSTGGLADTVVTGINGF 417          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.221e-33
Identity = 82/211 (38.86%), Postives = 126/211 (59.72%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            ++++K G+  +  + TVSP YA+E+++ E  G+ L+ +I  R   + GIVNG+D   WNP TD  I   Y A+ + + + L K+A+     +  D + P+   I RL  QKG D++A A+   +    +++VLG G   +E  L      +  +      +N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV
Sbjct:  197 VSFLKGGLQTATALSTVSPSYAEEILTAEF-GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKN-RALNKKAVAEHFRIDDDGS-PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTV 404          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_AQUAE5.482e-3440.38Glycogen synthase OS=Aquifex aeolicus GN=glgA PE=3... [more]
GLGA_RHILO7.160e-3440.28Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 S... [more]
GLGA_KLEP37.160e-3435.19Glycogen synthase OS=Klebsiella pneumoniae (strain... [more]
GLGA_ERWCT7.160e-3436.57Glycogen synthase OS=Erwinia carotovora subsp. atr... [more]
GLGA_THECA9.351e-3436.24Glycogen synthase OS=Thermus caldophilus GN=glgA P... [more]
GLGA_NOVAD9.351e-3438.86Glycogen synthase OS=Novosphingobium aromaticivora... [more]
GLGA_KLEP79.351e-3435.19Glycogen synthase OS=Klebsiella pneumoniae subsp. ... [more]
GLGA_SALTI1.221e-3334.26Glycogen synthase OS=Salmonella typhi GN=glgA PE=3... [more]
GLGA_CHLCV1.221e-3339.29Glycogen synthase OS=Chlamydophila caviae GN=glgA ... [more]
GLGA1_RHIRD1.221e-3338.86Glycogen synthase 1 OS=Rhizobium radiobacter GN=gl... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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