FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CITK8 (Glycogen synthase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.061e-33
Identity = 73/216 (33.80%), Postives = 126/216 (58.33%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +I+++KAG+  +D +  VSP YA+E+   +     ++ ++R+      + G++NG+D + W+P TD  +  +Y   + ++ K   K  LQ  +GL VD   P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHQEGRLSGVLNGVDEKIWSPETDLLLAARYTRDS-LEEKAENKRQLQIAMGLKVDDKAPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_SALAR (Glycogen synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 72/216 (33.33%), Postives = 128/216 (59.26%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG----IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +I+++KAG+  +D +  VSP YA+E+   +     ++ ++R+  ++G    ++NG+D + W+P +D  +  +Y   T ++ K   K  LQ  +GL V+  +P+   + RL  QKG D++  A+P  +++  Q+ +LG G   +++        +P +      ++   +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +
Sbjct:  194 QISFLKAGLYYADHITAVSPTYAREITEPQF-AYGMEGLLRQRHLEGRLSGVLNGVDEKIWSPESDLLLASRYTRDT-LEEKAENKRQLQIAMGLKVNDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEHPGQVGVQIGYHEAFSHRIMGGADIILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PROMS (Glycogen synthase OS=Prochlorococcus marinus (strain AS9601) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 83/209 (39.71%), Postives = 123/209 (58.85%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            M A +L +D V  VSP YA E+ + E  G  L+ ++      ++GI+NG+D+ EWNP  D  +  K+     ++ +   K+ LQ E+GL V+    ++G + RL +QKG D+L       +   + QI VLGTG + +E  L QL + YP +      ++  L+ +I  G+D  L+PSRFEPCG+ QL AMRYG++PIV   GGLVDTV
Sbjct:  180 MAAAMLYADRVNAVSPTYADEIKTHE-YGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPVLPAKFSIKN-LENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTV 386          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PROM2 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9215) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 83/209 (39.71%), Postives = 123/209 (58.85%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            M A +L +D V  VSP YA E+ + E  G  L+ ++      ++GI+NG+D+ EWNP  D  +  K+     ++ +   K+ LQ E+GL V+    ++G + RL +QKG D+L       +   + QI VLGTG + +E  L QL + YP +      ++  L+ +I  G+D  L+PSRFEPCG+ QL AMRYG++PIV   GGLVDTV
Sbjct:  180 MAAAMLYADRVNAVSPTYADEIKTHE-YGESLEGLLNYISGKLRGILNGIDLDEWNPAKDPVLPAKFSIKN-LENRLENKKILQREMGLEVNSKKYLLGMVSRLVDQKGVDLLLQVSRRLLAYTDSQIAVLGTGDRYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTV 386          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJA (Glycogen synthase 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.916e-33
Identity = 81/211 (38.39%), Postives = 127/211 (60.19%), Query Frame = 1
Query:   22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            N M AGIL +D V TVSP YA E+ +    G  L +++   G  ++GI+NG+D ++++P TD  +   +     +  + + K ALQ+ +GL V+ ++ ++G + RL EQKG D+L   +  F+   + Q ++LG+G+   E ++ ++   +P +      +   LA +I  GAD  L+PSRFEPCG+ Q+ AMRYG VPI   TGGLVDTV
Sbjct:  189 NTMAAGILYADQVNTVSPTYAMEIRTSLH-GEGLQDLLAWKGERLRGILNGIDTEKFDPRTDPALEANFSIDD-LSGRAVNKAALQSRLGLTVNPDVFLMGMVARLVEQKGIDLLIQTLDRFLAYSDSQFVLLGSGEAYYEGRIREMAERHPGRMAYQQGYQPQLAQLIYGGADVFLMPSRFEPCGISQMIAMRYGCVPIARRTGGLVDTV 397          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PROM5 (Glycogen synthase OS=Prochlorococcus marinus (strain MIT 9515) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32
Identity = 82/209 (39.23%), Postives = 124/209 (59.33%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            M A +L +D V  VSP YA E+ + E  G  LD ++      ++GI+NG+D+ EW+P  DK +  +++    ++ +   K  LQ E+GL V+    ++G + RL +QKG D++       +   + QI +LGTG K +E  L QL + YP +      ++  L+ +I  G+D  L+PSRFEPCG+ QL AMRYG++PIV   GGLVDTV
Sbjct:  180 MAAAMLYADRVNAVSPTYADEIKTHE-YGESLDGLLNYISGKLRGILNGIDLNEWDPNIDKVLPAQFNIKN-LERRSENKIILQKEMGLEVNSKKYLLGMVSRLVDQKGVDLVLQVSKRLLAYTDSQIAILGTGDKYLESGLWQLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTV 386          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PROA2 (Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32
Identity = 72/213 (33.80%), Postives = 125/213 (58.69%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +N +   +   D V T S  YA  L  G  +   LD +I K  +G+ GI NG+D ++WNP  DK I  K+D   + + K   K+ L  E G+ ++   P++G +   E  +GS++L  +I   ++ ++Q++V  +G K + ++L++    YPEK    ++F+  + H I+A +D +LIP+  E CG++QL A+ YG+VP+V + GG ++T+EE
Sbjct:  211 VNMLFTAVEHFDAVTTTSDAYAGMLADGRSEAFGLDRVIEKRASGLVGIANGLDAKQWNPAADKMIKKKFDIERLSE-KTENKKYLLEEFGMELEEATPLVGSVINAERFQGSELLMESIDGLMELDIQLVVSVSGDKELIRRLQEKAKAYPEKLAVYSEFSDAIFHQIMASSDLLLIPAEVESCGMMQLFAIAYGSVPVVYTAGGNIETIEE 422          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CHLL2 (Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glgA PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32
Identity = 77/233 (33.05%), Postives = 128/233 (54.94%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEA 699
            +N +  G   +D++ T S  YA E+V        L  ++  RK+   GI+NG+D ++WNP TDK I  +Y A   ++ K   K+AL  E GLP     P+ G I   +  +G+++L  ++   ++ ++Q+I+ G+G K  EK  +     YPE+      +   L H+ IAG D +L+P R E CG++QL AM YGT+P+  + GG+V+T+    ++  +GF    ++ D  A
Sbjct:  211 VNMLYTGAEHADLLTTTSRLYADEIVGNGSDTYGLGTVVEERKSTFHGILNGIDTRQWNPSTDKLIKKRYAADR-LEGKLDNKKALLDEAGLPFTEGRPLAGIIIGFDAFQGAELLKESLVKLVELDMQLIICGSGDKEYEKYFQDFAAEYPEQVSVRTDYADTLLHLAIAGFDMLLMPGRIESCGMLQLFAMSYGTIPVAYAGGGIVETIDAVTDKSGSGFLFYDYTADAFA 442          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_BORBR (Glycogen synthase OS=Bordetella bronchiseptica GN=glgA PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32
Identity = 82/217 (37.79%), Postives = 130/217 (59.91%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG-VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            ++N++KAGI  +  V TVS  YA+E+++    G  L  ++R  G  +  + NG+D   WNP  D ++G +++DA  + + K   K ALQAE+GL +  +  V+    RL  QK +D+  AA+P  ++  E++Q  ++G G+  +E  L  L   YP +      ++ PLAH + AGAD +L  SRFEP GL  L+AMRYGT+P+ +  GG+VDT+ +
Sbjct:  204 RVNFLKAGIRYATRVTTVSRAYAREILTPAF-GCGLHGLLRARGADLSPVPNGIDTALWNPAADPHLGGLRFDALDMRN-KACCKAALQAELGLQLRADATVLAMGSRLTGQKMADVAIAALPALLEAHEHLQFALIGRGEPDLEAALRALAARYPGRCAVHIGYDEPLAHRLHAGADLLLHGSRFEPFGLTPLYAMRYGTLPVASRVGGMVDTIRD 418          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_HYDS0 (Glycogen synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=glgA PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.303e-32
Identity = 81/230 (35.22%), Postives = 126/230 (54.78%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            ++N++K GI+ SD++ TVS  +A+E+ +  + G  L+ ++R K  + GI+NG+D + WNP TDK +   YD +T    K   K  ++   GL      P+  FI RL +QKG D++  A+   +K     I LG+G    + ++  +            ++N  L+  + AGAD  L+PS +EPCG+ Q+ AMRYG +PIV  TGGL DTV       E  TGF    ++
Sbjct:  195 QVNFLKGGIVHSDVITTVSKTHAKEIQT--NMGFGLEGVLREKRYVFGILNGIDTESWNPATDKSLYQNYDINTFKAGKEKNKMYVKELFGLETPHTRPLAAFIARLAKQKGLDLIEKAVDDAVKIGYDFIFLGSGDYYYQGKVLDMVKRNMGYVAARIEYNDILSRKLYAGADMFLMPSEYEPCGIGQMIAMRYGAIPIVHKTGGLADTVVDYNEDNEHGTGFSFEDYT 422          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CITK86.061e-3333.80Glycogen synthase OS=Citrobacter koseri (strain AT... [more]
GLGA_SALAR7.916e-3333.33Glycogen synthase OS=Salmonella arizonae (strain A... [more]
GLGA_PROMS7.916e-3339.71Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROM27.916e-3339.71Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA2_SYNJA7.916e-3338.39Glycogen synthase 2 OS=Synechococcus sp. (strain J... [more]
GLGA_PROM51.034e-3239.23Glycogen synthase OS=Prochlorococcus marinus (stra... [more]
GLGA_PROA21.034e-3233.80Glycogen synthase OS=Prosthecochloris aestuarii (s... [more]
GLGA_CHLL21.034e-3233.05Glycogen synthase OS=Chlorobium limicola (strain D... [more]
GLGA_BORBR1.350e-3237.79Glycogen synthase OS=Bordetella bronchiseptica GN=... [more]
GLGA_HYDS02.303e-3235.22Glycogen synthase OS=Hydrogenobaculum sp. (strain ... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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