FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_BORPD (Glycogen synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=glgA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30
Identity = 78/214 (36.45%), Postives = 121/214 (56.54%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN--VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            +IN+MKAG+  +D + TVS +YA+E+++ E  G  LD ++R     +  I NG+D   WNP +D ++G    ++     K   K ALQ   GL  D+   ++    RL  QK +D+   A+P  +  +  +Q+ ++G G++  E +LE L   YP +      ++   AH + AGAD +L  SRFEP GL  L+AMRYG VPI +  GG+ DT+
Sbjct:  200 RINFMKAGLRYADRITTVSRNYAREIMTPEF-GCGLDPLLRARAADLAPIPNGIDDALWNPASDPHLGHLCYSARNPARKSRAKAALQKAFGLHPDQGAALLAMGSRLTSQKMADVAVEALPDALHRHPSLQVAIIGRGERQYEIELEALAARYPGRCAVRIGYDETTAHRLHAGADMLLHGSRFEPFGLTPLYAMRYGAVPIASRVGGMADTI 412          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA1_NITOC (Glycogen synthase 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30
Identity = 85/224 (37.95%), Postives = 122/224 (54.46%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP--------MEKQLEQ-----LEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            +N MK GI+ S+ + TVSP Y  E +   D+G  L + + +   K  GI+NG+D + WNP  D YI  +Y+  T +D K   K AL+  + L  D   P++G I RL+ QKG +++  A+ + +    Q ++LG             +++ L       LEI Y E           LAH I AGAD +++PS +EPCGL Q+ AM+YGTVPIV   GGL DTV
Sbjct:  202 VNLMKGGIVFSNFITTVSPRYLDE-IRYTDQGYGLQHTLHEHSQKLGGILNGVDYKVWNPDIDPYIAARYNLKT-LDKKYENKTALRHRLWLR-DEYKPIVGVISRLDPQKGVELIRHALFYCLANGCQFVLLGASASNSINADFWYLKQYLNDDPDCHLEIGYDED----------LAHQIYAGADMLIVPSIYEPCGLTQMIAMKYGTVPIVRHVGGLADTV 412          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA1_BRAJA (Glycogen synthase 1 OS=Bradyrhizobium japonicum GN=glgA1 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.192e-30
Identity = 77/221 (34.84%), Postives = 127/221 (57.47%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 666
            +++++KAG++ +  + TVS  YA+E+ + E  G  L+ ++R       + GI+NG+D + W+P +   +  ++ A   +  K    + ++ + GL V R  P+ G + RL  QKG D++ +A    I    QI+V G+G+  +E+ L       P+       FN   A  I AG+DF L+PSRFEPCGL Q++A R+G++PI   TGGL +T+ +G TGF
Sbjct:  188 QVSFLKAGLVYASHLTTVSGTYAREITTAEF-GCGLEGLLRLRSDAAELTGILNGID-ESWDPRSCAQLAQQFGAGDWV-GKKANADYVRKQFGLAVSRG-PMFGIVARLVHQKGIDLVLSAADEIIDAGGQIVVTGSGEPALEQALIDAHRRRPDAIGVAIGFNDAQARRIFAGSDFTLMPSRFEPCGLSQMYAQRFGSLPIGHQTGGLAETITDGETGF 404          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PSEPK (Glycogen synthase OS=Pseudomonas putida (strain KT2440) GN=glgA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.070e-29
Identity = 75/229 (32.75%), Postives = 128/229 (55.90%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 690
            K++++KAG+  S  + TVS  YA+E+ + E  G  LD  +        + GI NG+D + W+  TDK++   +  +   + K    + ++   GL  D   P+   + RL  QKG D+      + +++  QI ++G G+   E+ + +L + +P +      FN   A  + AG+DF+L+PSR+EPCGL Q++A R+G++P+  +TGGL DT+E G TGF     +V+
Sbjct:  239 KLSFLKAGLAYSSHITTVSATYAREITTPEF-GCGLDGFLASKAQQGLLGGIPNGID-ESWDSATDKHLQHNFSIND-WEGKARNTQEVRELFGLD-DSEGPLFAVVSRLVYQKGLDLTLGVADYIVEQGGQIAIIGRGEPEEEQAMRELALRHPGRIGVRIGFNETDARRMFAGSDFLLMPSRYEPCGLSQMYAQRFGSLPVARNTGGLADTIECGVTGFLFNESTVE 463          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PELLD (Glycogen synthase OS=Pelodictyon luteolum (strain DSM 273) GN=glgA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29
Identity = 71/230 (30.87%), Postives = 126/230 (54.78%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR-KTGI-KGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVD 690
            +N +  G+  +DM+ T S  +A E++  E  G  L  I+  + GI  GIVNG+D ++WNP TDK I  ++ A+  MD K   + AL  EV +P +   PV+G I   ++ +G+ ++  ++   +  ++ +++ G G K  EK        +P++            H+ IAG D +++  + E CG++Q+ AM YGT+P+  + GG+V+T++E    G +GF    ++ D
Sbjct:  211 VNMLYTGVENADMLTTTSKLHADEILHDEIPGCGLQQILAGQNGILHGIVNGIDTRQWNPSTDKLIKKRF-ATDRMDGKLDNRAALSEEVHMPFEDGRPVVGVIMHFDDFQGAVLIEKSLKKLVALDIHLLICGAGDKKYEKSFRDFADAHPDRVSLSTDCPESFLHLAIAGLDMLVMAGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIDEVSEGGGSGFIFREYTPD 439          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_FUSNN (Glycogen synthase OS=Fusobacterium nucleatum subsp. nucleatum GN=glgA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29
Identity = 81/212 (38.21%), Postives = 118/212 (55.66%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            I+++K G++ SD + TVS  YA+E+ + ++ G  +  + +K   K  GIVNG+D   + PL+ K                +LK  LQ ++GL V+ + P+I  I RL+ QKG D +       +   +Q I+LGTG+K  E      E L+  +      FN  L+  I AGAD  L+PS FEPCGL Q+ AMRYG +P+V  TGGL DTV+
Sbjct:  195 ISFLKGGVVYSDYITTVSDSYAEEIKT-QELGEGIHGLFQKYDYKLSGIVNGIDKISY-PLSKK-------------PHKILKADLQKKLGLDVEEDTPLIVIITRLDRQKGLDYIVEKFDEMMSLGIQFILLGTGEKRYEHFFAYQEYLHKGQVCSYIGFNQELSTEIYAGADIFLMPSVFEPCGLSQMIAMRYGCIPVVRETGGLKDTVK 391          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTB (Glycogen synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=glgA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29
Identity = 85/224 (37.95%), Postives = 121/224 (54.02%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT--GKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 666
            +K  +  SD V TVSP YA+E++  +    E+ + I  R+  ++GI+NG+D   W P TD  +   Y        S   +AK   K+AL   +GL ++ + P +  I R+ EQKG   +  AI H ++    +I++GT  G +  E+     E L      R +  ++  LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF
Sbjct:  197 LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANSPNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGF 418          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CHLT2 (Glycogen synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=glgA PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.397e-29
Identity = 85/224 (37.95%), Postives = 121/224 (54.02%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT--GKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 666
            +K  +  SD V TVSP YA+E++  +    E+ + I  R+  ++GI+NG+D   W P TD  +   Y        S   +AK   K+AL   +GL ++ + P +  I R+ EQKG   +  AI H ++    +I++GT  G +  E+     E L      R +  ++  LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF
Sbjct:  197 LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANSPNVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGF 418          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTR (Glycogen synthase OS=Chlamydia trachomatis GN=glgA PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29
Identity = 85/224 (37.95%), Postives = 121/224 (54.02%), Query Frame = 1
Query:   28 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA------STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT--GKKPMEKQLEQLEILYPEK-ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 666
            +K  +  SD V TVSP YA+E++  +    E+ + I  R+  ++GI+NG+D   W P TD  +   Y        S   +AK   K+AL   +GL ++ + P +  I R+ EQKG   +  AI H ++    +I++GT  G +  E+     E L      R +  ++  LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF
Sbjct:  197 LKGALYCSDFVTTVSPTYAKEILE-DYSDYEIHDAITARQHHLRGILNGIDTTIWGPETDPNLAKNYTKELFETPSIFFEAKAENKKALYERLGLSLEHS-PCVCIISRIAEQKGPHFMKQAILHALENAYTLIIIGTCYGNQLHEEFANLQESLANSPDVRILLTYSDVLARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGF 418          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA2_ANASP (Probable glycogen synthase 2 OS=Anabaena sp. (strain PCC 7120) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.825e-29
Identity = 82/217 (37.79%), Postives = 123/217 (56.68%), Query Frame = 1
Query:   13 FKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            F +N+MK GI+ S+ V TVSP++A E     D G  L + +   K    G++NG+D   WNP  D++I   Y      + K   K+AL+  + L    + P+I +IGRL+ QKG  ++  AI H + +  Q ++LG+    G     +  +Q     P+    +  FN  L+H+I AGAD I++PS +EPCGL Q+  ++YGTVPIV   GGLV+TV
Sbjct:  203 FALNYMKGGIVYSNAVTTVSPNHALE-AQYTDVGCGLGHTLYLHKEKFSGVLNGIDYDFWNPEIDRHIPDNYSQDD-FEQKLYNKKALRERLLLQA-ADKPIIAYIGRLDNQKGVHLVHHAIYHALNKGAQFVLLGSATEAGINAHFRHEKQFLNSNPDVHLELG-FNEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTV 415          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_BORPD8.192e-3036.45Glycogen synthase OS=Bordetella petrii (strain ATC... [more]
GLGA1_NITOC8.192e-3037.95Glycogen synthase 1 OS=Nitrosococcus oceani (strai... [more]
GLGA1_BRAJA8.192e-3034.84Glycogen synthase 1 OS=Bradyrhizobium japonicum GN... [more]
GLGA_PSEPK1.070e-2932.75Glycogen synthase OS=Pseudomonas putida (strain KT... [more]
GLGA_PELLD1.397e-2930.87Glycogen synthase OS=Pelodictyon luteolum (strain ... [more]
GLGA_FUSNN1.397e-2938.21Glycogen synthase OS=Fusobacterium nucleatum subsp... [more]
GLGA_CHLTB1.397e-2937.95Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA_CHLT21.397e-2937.95Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA_CHLTR1.825e-2937.95Glycogen synthase OS=Chlamydia trachomatis GN=glgA... [more]
GLGA2_ANASP1.825e-2937.79Probable glycogen synthase 2 OS=Anabaena sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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