FC868685
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_METJA (Probable glycogen synthase OS=Methanocaldococcus jannaschii GN=glgA PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22 Identity = 73/252 (28.97%), Postives = 124/252 (49.21%), Query Frame = 1 Query: 19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPL-----------------TDKYIGVKYDASTVMDAKPLLK-----------------------EALQAEVGLPVDRNI--PVIGFIGRLEEQKGSDILAAAIPHFI-KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645 + +++ GI +D V TVSP +A+E+ + + + GI+NG+D+ E++P+ YI Y A + KP +K A EV VD +I P+IGF+GR QKG + + AIP + K +++ + L G + +E++L+ L + + + +++PL+ ++ AG+D+I++PS +EPCGL+Q+ AM Y T I TGGL DT+ Sbjct: 165 MTFLELGIKYADAVNTVSPSHAEEIKNYP----YIKKYLNNKPFCGILNGIDIDEYDPMKIIERMCNLSNNKLDPRNYAYIS-PYSAEDSHNIKPKIKYSWFYRGGVYEYVEDWNKIDKGISATDVEVHGGVDGDIETPLIGFVGRATHQKGFNTMFEAIPELLEKHDIRFVFLTKGDRDIEERLKNLANEHDGRILALIGYSLPLSSLVFAGSDWIIMPSYWEPCGLVQMEAMAYCTPVIATETGGLKDTI 411
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: MOK12_SCHPO (Cell wall alpha-1,3-glucan synthase mok12 OS=Schizosaccharomyces pombe GN=mok12 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 59/161 (36.65%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 172 DVQEWNPLTDKYIGVKYDASTVMDAK-PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 633 D++ N LTD + V + V++AK LLK+ Q L VD + ++ F+GR QKG D++A P + E NVQ+I +G G+ EK LEQ+ +P + F + + AG DF LIPSR EP GL+ + R G + I + TGGL Sbjct: 1423 DLKLLNHLTDDPVDVDF----VLEAKRKLLKKQTQEWANLDVDPSAQLLVFVGRWSHQKGIDLIADLAPKLLTEHNVQLITIGPVIDLHGQFAAEK-LEQIAKRFPTRVLCKPVFTA-VPPFLFAGTDFALIPSRDEPFGLVAVEFGRKGVLCIGSRTGGL 1577
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: MOK14_SCHPO (Cell wall alpha-1,3-glucan synthase mok14 OS=Schizosaccharomyces pombe GN=mok14 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 54/157 (34.39%), Postives = 77/157 (49.04%), Query Frame = 1 Query: 259 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDC 693 K Q GL +D ++ F+GR QKG DILA P +++ N+Q+IV+G GK EK + +E YP + +F + L I GADF LIPSR EP GL+ + R G + I + GGL + +VE T + + C Sbjct: 532 KRKAQEWAGLTIDDEADLLVFVGRWSVQKGIDILADLAPTLLEKFNIQLIVVGPLIDLYGKFAAEKFMYIME-RYPGRVFSKPEF-VHLPPFIFEGADFALIPSRDEPFGLVAVEFGRRGAICIGSRVGGLGEMPGWWYSVESSSTAYLLKQLEKSC 686
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: AGS1_SCHPO (Cell wall alpha-1,3-glucan synthase ags1 OS=Schizosaccharomyces pombe GN=ags1 PE=1 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12 Identity = 62/184 (33.70%), Postives = 86/184 (46.74%), Query Frame = 1 Query: 196 TDKYIGVKYDASTVMD-----AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGT-----GKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCE 696 TD+ + K A T +D +K K Q GL V+ ++ F+GR QKG D++A P ++ VQ+I +G GK EK L+ L+ YP + KF L I +GADF LIPSR EP GL+ + R G + I A GGL +VE T + F C+ Sbjct: 1396 TDEIVDDKAVAITDIDPDMEKSKVEHKRLAQEWAGLEVNEKYDLLVFVGRWSSQKGIDLIADIAPSLLESYKVQLICVGPIIDLYGKFAAEK-LDVLQKKYPTRVFSQPKFT-QLPPYIFSGADFALIPSRDEPFGLVAVEFGRKGALGIGARVGGLGQMPGWWYSVESSATPHLLKQFEQACQ 1577 The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 364
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bpback to top |