FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: SSY22_ORYSJ (Soluble starch synthase 2-2, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SSII-2 PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 3.426e-44
Identity = 98/214 (45.79%), Postives = 137/214 (64.02%), Query Frame = 1
Query:   22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIG----VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            N   AG+  +D  +TVS  Y  E+ +  D G  L  II      ++GIVNG+D+ EWNP  D+++       Y   T+   K   KEALQ ++GL V  ++P+IGFIGRL+ QKG DI+  A+P    ++VQ+++LGTG+  +E+ L + E  + +K RG   F++ LAH I AGAD +L+PSRFEPCGL QL+AM YGTVP+V + GGL DTV
Sbjct:  409 NVFAAGLKMADRAVTVSHGYLWEIKT-MDGGWGLHEIINHNDWKLQGIVNGIDMAEWNPEVDEHLQSDGYANYTFETLDTGKKQCKEALQRQLGLQVRDDVPLIGFIGRLDHQKGVDIIGDAMPWIAGQDVQVVMLGTGRPDLEEMLRRFESEHNDKVRGWVGFSVQLAHRITAGADVLLMPSRFEPCGLNQLYAMAYGTVPVVHAVGGLRDTV 621          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_MYXXD (Glycogen synthase OS=Myxococcus xanthus (strain DK 1622) GN=glgA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.426e-44
Identity = 94/217 (43.32%), Postives = 142/217 (65.44%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTG 663
            +N++KAG++ SD + TVSP YA+E+ + E +G  LD ++R     + GI+NG+D  EWNP  D ++  +Y     +  K + K  L A  GL  D   PV GF+ RL  QKG D+L  A+P  +  +++++ +G+G+ P+E+ L  L+  YP++      F+  L+H++ AGADF L+PSR+EPCGL Q++++RYGTVPIV +TGGLVDTVE G  G
Sbjct:  203 VNFLKAGLVFSDALTTVSPTYAREIQTPE-QGYGLDGLLRHRAHRLHGILNGVDTHEWNPEDDAFLPARYGLKD-LSGKAVCKRELLARFGLE-DGPAPVFGFVSRLAWQKGMDLLLEALPAALHADIRVVGVGSGEGPLEEGLLALQSRYPKQVGVHIGFDPGLSHLVEAGADFFLMPSRYEPCGLNQMYSLRYGTVPIVRATGGLVDTVEGGLDG 416          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.426e-44
Identity = 99/212 (46.70%), Postives = 139/212 (65.57%), Query Frame = 1
Query:   22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            N++K GI+ +  + TVSP YA+E+ + E  G  LD  +R    +  GI+NG+D  E+NP TDK I V +D ++ ++ K   K ALQ E+GLPV  ++PVIG I RL EQKG D++ AA    +  ++Q +VLGTG++  E+  + L   +PEK      FN+ LA  I AG+D  L+PSR+EPCGL Q+ AMRYGT+P+V  TGGL DTV+E
Sbjct:  191 NFLKTGIVTATAISTVSPTYAKEIQTPE-YGAGLDETLRALSDRLFGILNGIDYSEYNPATDKRIPVNFDINS-LEKKKENKIALQKELGLPVI-DVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQFVVLGTGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKE 399          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.844e-44
Identity = 96/212 (45.28%), Postives = 131/212 (61.79%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            +N+MK GI+ SD +  VSP Y +E +  E  G +LD ++RK    + GIVNG+D   +NP TD YI  +YDA ++ + K   K ALQ   GLP   + P+I  + RL +QKG D++       ++E+VQ I+LG+G    EK  E +   YPEK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+
Sbjct:  198 VNFMKGGIIASDQITAVSPTYKEE-IQYEFFGEKLDGLLRKYNGKLSGIVNGIDTSVYNPETDSYITAQYDADSLYE-KSKNKRALQRYFGLPEKEDTPIISMVTRLTKQKGLDLVRTVFREIMEEDVQCIILGSGDSEYEKFFEWMAYEYPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQ 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_LACAC (Glycogen synthase OS=Lactobacillus acidophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.632e-44
Identity = 106/231 (45.89%), Postives = 140/231 (60.61%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFS 684
            +NWMK GIL +D V TVSP YA+E+ + E  G  LD I+R    K  GI+NG+D +++NP TD  I   YD    +  K   K ALQ E+ LP+  NIP+IG + RL  QKG  +L   + + ++ NVQI++LG G    E +L ++   YP+K + +  F++ LA  I AGAD  L+PS FEPCGL QL A+RYGT+PIV   GGL DTV        EG TGF    FS
Sbjct:  198 VNWMKTGILYADRVTTVSPSYAREIQTVEF-GQGLDAILRMCSHKLTGILNGIDFEKYNPKTDPVIKKNYDVYH-LHHKSKDKIALQKELDLPIKPNIPLIGMVSRLTAQKGCQLLLDELDNILQFNVQIVILGNGDPYYEHRLMEIAERYPDKLKVILAFDVKLAQRIYAGADSFLMPSAFEPCGLSQLIALRYGTLPIVHEIGGLADTVWVYDETTNEG-TGFGFKEFS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.968e-44
Identity = 88/212 (41.51%), Postives = 138/212 (65.09%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            +N+MKAG++ ++ + TVSP Y  E++     G  L+ ++  R   ++GI+NG+D ++++P TD+++   YD  TV + K   K ALQ E+GLPV+ ++P+ GF+ RL +QKG D+LA  +P   + + Q I+LG+G+   E   +    + P+K      F++ LA  I AG+D  L+PSRFEPCGL QL +M+YG++PIV  TGGL DTV+
Sbjct:  201 VNYMKAGLVHANQITTVSPSYRDEIMDPY-YGETLEPVLQHRAVDVRGILNGIDYRQFSPETDEHLVENYDVKTVEEGKAANKAALQQELGLPVNPDVPLFGFVSRLVDQKGIDLLAHILPDLFELDAQFIILGSGEAEYEGLFQHASTIRPDKVASYIGFDVGLAQRIYAGSDAFLMPSRFEPCGLSQLISMKYGSLPIVRETGGLRDTVQ 411          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRU0 (Glycogen synthase OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.302e-43
Identity = 99/230 (43.04%), Postives = 139/230 (60.43%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFS 684
            +NWMKAG+L +D V TVSP YA E+ +    G  LD ++R     + GIVNG+D + +NP  D ++   +  +  +  K   K+ LQ ++GLPV+ NIP+IG + RL +QKG DIL + +   +++++Q++VLGTG +  E+        YPEK      F+I LA  I A +D  L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTVE      +  TGF    FS
Sbjct:  198 LNWMKAGVLYADRVTTVSPSYANEIQTVAF-GKGLDQVMRMESGKLSGIVNGIDTELYNPENDPHVTFPFSIND-LSGKAKNKKELQEQLGLPVNENIPLIGIVSRLTDQKGFDILVSELESILQQDLQMVVLGTGYQQYEEAFRWFANCYPEKLSANITFDIGLAQKIYASSDMFLMPSAFEPCGLSQMMAMRYGTLPIVHEIGGLKDTVEPFNPFDKTGTGFGFNHFS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRA5 (Glycogen synthase OS=Streptococcus agalactiae serotype V GN=glgA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.302e-43
Identity = 98/230 (42.61%), Postives = 138/230 (60.00%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKA IL SD V TVSP YA E+ + E  G  LD I+R     + GIVNG+D    NP TD ++   +  S  ++ K   K ALQ  +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG    E+        YPEK      F++ LA  I A +D  ++PS FEPCGL Q+ AMRYG++P+V   GGL DTV      +   TGF    FS
Sbjct:  198 LNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRA3 (Glycogen synthase OS=Streptococcus agalactiae serotype III GN=glgA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.302e-43
Identity = 98/230 (42.61%), Postives = 138/230 (60.00%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKA IL SD V TVSP YA E+ + E  G  LD I+R     + GIVNG+D    NP TD ++   +  S  ++ K   K ALQ  +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG    E+        YPEK      F++ LA  I A +D  ++PS FEPCGL Q+ AMRYG++P+V   GGL DTV      +   TGF    FS
Sbjct:  198 LNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRA1 (Glycogen synthase OS=Streptococcus agalactiae serotype Ia GN=glgA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.302e-43
Identity = 98/230 (42.61%), Postives = 138/230 (60.00%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKA IL SD V TVSP YA E+ + E  G  LD I+R     + GIVNG+D    NP TD ++   +  S  ++ K   K ALQ  +GLP D+N+P+IG + RL +QKG DI+A+ + + +++++Q+++LGTG    E+        YPEK      F++ LA  I A +D  ++PS FEPCGL Q+ AMRYG++P+V   GGL DTV      +   TGF    FS
Sbjct:  198 LNWMKAAILYSDRVTTVSPSYANEIKTPEF-GKGLDQIMRMEAGKLSGIVNGIDSDLLNPETDAFLPYHFSKSN-LEGKIKNKLALQENLGLPQDKNVPLIGIVSRLTDQKGFDIIASELDNMLQQDIQMVILGTGYHHFEETFSYFASRYPEKLSANITFDLRLAQQIYAASDIFMMPSAFEPCGLSQMMAMRYGSLPLVHEVGGLKDTVVAFNQFDGSGTGFSFNHFS 425          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
SSY22_ORYSJ3.426e-4445.79Soluble starch synthase 2-2, chloroplastic/amylopl... [more]
GLGA_MYXXD3.426e-4443.32Glycogen synthase OS=Myxococcus xanthus (strain DK... [more]
GLGA_KOSOT3.426e-4446.70Glycogen synthase OS=Kosmotoga olearia (strain TBF... [more]
GLGA_BACC15.844e-4445.28Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA_LACAC7.632e-4445.89Glycogen synthase OS=Lactobacillus acidophilus GN=... [more]
GLGA_EXIS29.968e-4441.51Glycogen synthase OS=Exiguobacterium sibiricum (st... [more]
GLGA_STRU01.302e-4343.04Glycogen synthase OS=Streptococcus uberis (strain ... [more]
GLGA_STRA51.302e-4342.61Glycogen synthase OS=Streptococcus agalactiae sero... [more]
GLGA_STRA31.302e-4342.61Glycogen synthase OS=Streptococcus agalactiae sero... [more]
GLGA_STRA11.302e-4342.61Glycogen synthase OS=Streptococcus agalactiae sero... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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