FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_CLOB8 (Glycogen synthase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.302e-43
Identity = 96/219 (43.84%), Postives = 138/219 (63.01%), Query Frame = 1
Query:    1 TCERFK--INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            TC +F   +++MK G+  SD++ TVS  YA E+ + E  G  LD ++R+    ++GI NG+D  E+NP TDK+I   Y  +++ D K + K  LQ E+GL VD+NIP++  + RL  QKG D+L       ++ENVQ+++LGTG K  E+  + L+  Y  K     KF+  LA+ I A  D  L+PS FEPCGL QL A+RYG++PIV  TGGL DT+
Sbjct:  191 TCLKFDDGVSYMKGGLCYSDVITTVSNTYAYEIQTPE-YGQRLDGVLRERSYALRGITNGIDYDEFNPKTDKFIKKNYSINSIED-KAINKTELQKELGLTVDKNIPMLAMVTRLTSQKGMDLLVNISDKLLQENVQLVILGTGDKHYEEHFKWLDSRYGNKVSANIKFDNGLANKIYAACDMFLMPSLFEPCGLGQLIALRYGSIPIVRETGGLKDTI 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRZJ (Glycogen synthase OS=Streptococcus pneumoniae (strain JJA) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.700e-43
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSANITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRPI (Glycogen synthase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.700e-43
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSANITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVCAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA1_METCA (Glycogen synthase 1 OS=Methylococcus capsulatus GN=glgA1 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.700e-43
Identity = 92/214 (42.99%), Postives = 137/214 (64.02%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            +++++K G++ +D + TVSP YA+E+ + E  G  LD ++R  K+ + GI+NG+D   WNP TD Y+   Y   T ++ K + +  L+   GLP D  + V+G +GR+ EQKG D+L   +   ++  VQ++VLG+G K  E+  E+     PE+      ++ PLAH+I AGAD  L+PSRFEPCGL QL++ RYGTVPIV   GGL DTVE+
Sbjct:  196 QLSFIKGGLVFADRINTVSPSYAEEIQTPEF-GCGLDGLLRSRKSCLSGILNGIDDVAWNPATDPYLPAPYGPDT-LERKKVNRTVLRQRYGLPDDPEVAVLGMVGRMVEQKGVDLLIDILDDLLQLPVQLVVLGSGDKEFERCFERAAAARPERIAVTIGYDEPLAHLIEAGADIFLMPSRFEPCGLNQLYSQRYGTVPIVRKVGGLADTVED 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRR6 (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glgA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.221e-43
Identity = 96/230 (41.74%), Postives = 136/230 (59.13%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD+I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDHILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRP2 (Glycogen synthase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=glgA PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.221e-43
Identity = 96/230 (41.74%), Postives = 136/230 (59.13%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD+I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDHILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRZT (Glycogen synthase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=glgA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRZP (Glycogen synthase OS=Streptococcus pneumoniae (strain P1031) GN=glgA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRPS (Glycogen synthase OS=Streptococcus pneumoniae (strain CGSP14) GN=glgA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRPN (Glycogen synthase OS=Streptococcus pneumoniae GN=glgA PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.900e-43
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKAGIL ++ V TVSP YA E+++ +  G  LD I++     + GIVNG+D   +NP TD  +   ++    +  K   K  LQ  VGLPV  ++P++G + RL  QKG D++  ++ H ++E+VQI++LGTG    E        +YP+K      F++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF   + S
Sbjct:  198 LNWMKAGILYANRVSTVSPSYAHEIMTSQF-GCNLDQILKMESGKVSGIVNGIDADLYNPQTDALLDYHFNQED-LSGKAKNKAKLQERVGLPVRADVPLVGIVSRLTRQKGFDVVVESLHHILQEDVQIVLLGTGDPAFEGAFSWFAQIYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGFSFDNLS 425          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_CLOB81.302e-4343.84Glycogen synthase OS=Clostridium beijerinckii (str... [more]
GLGA_STRZJ1.700e-4341.74Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPI1.700e-4341.74Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA1_METCA1.700e-4342.99Glycogen synthase 1 OS=Methylococcus capsulatus GN... [more]
GLGA_STRR62.221e-4341.74Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRP22.221e-4341.74Glycogen synthase OS=Streptococcus pneumoniae sero... [more]
GLGA_STRZT2.900e-4341.74Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRZP2.900e-4341.74Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPS2.900e-4341.74Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPN2.900e-4341.74Glycogen synthase OS=Streptococcus pneumoniae GN=g... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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