FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP5 (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.630e-41
Identity = 94/211 (44.55%), Postives = 130/211 (61.61%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            I +MKAG+  SD + TVSP YA E+ + E  G+ LD ++R+    + GI+NG+D + WNP TDK I   YD  T + A+   K AL+   GL  + +  +IG I RL  QKG D+L   +P  + E +Q+ +LG G   +E    Q+   +P +   V  ++  LAH+I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  200 IGYMKAGLQLSDRITTVSPAYALEIQAPE-AGMGLDGLLRQRSHHLTGILNGIDEKVWNPATDKRIAATYDVKT-LPARGANKAALRERFGLASETDRLLIGVISRLSWQKGLDLLLETLPLLLSEGIQLALLGAGDAALEAAFRQVAQSHPGQIGVVVGYDEDLAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLSDTV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA1_GEOMG (Glycogen synthase 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.630e-41
Identity = 90/211 (42.65%), Postives = 132/211 (62.56%), Query Frame = 1
Query:   22 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            N +K G+  + ++ TVS  YA+E+ + E  G  LD ++R+    + GI+NG+D ++WNP  D YI  +Y A+  +  K L K  LQ   GLP   ++P+ G + RL +QKG DILA AI   +  +VQ ++LG G+         ++  YP+K      +N PL+H I AGADF L+PS FEPCGL Q++++RYGT+PIV +TGGL D+VE
Sbjct:  209 NLLKGGLYHATVLNTVSEGYAREMQTPE-YGWGLDGVVRERAADLYGILNGVDYEDWNPEVDPYIAARYSAAD-LSGKKLCKRDLQRTFGLPERDDVPLFGMVSRLVKQKGVDILAEAIHRILALDVQFVMLGAGEPWTHFYFGDIKNAYPDKFNIFVGYNNPLSHQIEAGADFFLMPSAFEPCGLNQMYSLRYGTLPIVRATGGLDDSVE 417          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.047e-41
Identity = 89/211 (42.18%), Postives = 126/211 (59.72%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            I ++KAG+  +D + TVSP YA E + G + G+ L+ ++R     + GI+NG+D + W+P  D+ I   YD  T+  A+   K+ALQA  GL  +    + G I RL  QKG D+L   +P  + +  Q+ +LG G  P+E       + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  200 IGYLKAGLQLADRITTVSPSYALE-IQGSEAGMGLEGLLRLRAGQLSGILNGVDTKVWDPSADQLIPATYDVETI-GARARNKQALQARFGLRAESGALLFGVISRLSWQKGLDMLLEVLPGMLADGAQLALLGAGDAPLEAGFRDAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_BACCN (Glycogen synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.047e-41
Identity = 96/212 (45.28%), Postives = 127/212 (59.91%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            IN+MK GI+ +D + TVS  Y +E +  E  G +LD ++RK   K  GIVNG+D   +NP  D YI   YD  T+  AK   K ALQ   GLP   N P+I  + RL +QKG D++ A     ++E+VQ I+LG+G    E+  E +   Y EK +    FN  LAH + AG+D  L+PS FEPCGL QL A+ YG +PIV  TGGL DTV+
Sbjct:  198 INFMKGGIIAADHITTVSSTYKEE-IQYEFFGEKLDGLLRKYNDKLSGIVNGIDTSVYNPRLDSYITATYDVDTLY-AKRENKWALQHYFGLPEKENTPIISMVTRLTKQKGLDLVRAVFQEIMQEDVQCIILGSGDSEYEQFFEWMAYEYSEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALTYGVIPIVRETGGLNDTVK 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_ELUMP (Glycogen synthase OS=Elusimicrobium minutum (strain Pei191) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.898e-41
Identity = 94/236 (39.83%), Postives = 144/236 (61.02%), Query Frame = 1
Query:    7 ERFK----INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVD 690
            ERF+    I+++K+GI+ +D V TVSP+YA+E+   E  G  ++ ++R  +    GI+NG+D   W+P  D  I   Y++ + +  K   K+ LQ  +GL V  + P++G + R++ QKG D++   +  + K+ VQ +V+GTG   MEK    L      K   VAK +  LAH + AG+D  L+PSRFEPCGL Q+ +MRYGTVPIV+  GGL+DTV+  +G T +  G F ++
Sbjct:  194 ERFEYYGGISYLKSGIVYADYVNTVSPNYAKEITLDEKMGFGMEGLLRSRQDTFCGILNGLDTGVWDPEHDPLIPYSYESFSPVKGKAACKQFLQNMLGLEVSPSKPLVGIVSRMDYQKGLDLIPGVVNKY-KDKVQFVVVGTGDSGMEKAFMALAKNNVGKVAYVAKVDEELAHRVYAGSDIFLMPSRFEPCGLSQMISMRYGTVPIVSRVGGLLDTVKGYDGITKYATGFFILE 428          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_DESAA (Glycogen synthase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=glgA PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.898e-41
Identity = 93/237 (39.24%), Postives = 145/237 (61.18%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFT--GFQMGSFS 684
            +++ +KAGI  ++ ++TVSP Y++E+ + E +G  LD ++RK    + GI+NG+D Q W+P TDK+I   Y  +  M  K   K+AL  E+G+     N PV G + RL  QKG +++  A+P  ++  +  I+LG G++   + L +L   YP + R    FN PLAH I+AGAD + +PS +EPCGL Q++A++YGT+P+  +TGGL DTV +         GFT   F  G+F+
Sbjct:  197 QLSLLKAGIAYANKLVTVSPTYSREIQTTE-QGAGLDGLMRKRSQDLAGILNGVDFQVWSPETDKHIPCNYSTAD-MAGKGKCKKALLDEMGMDSQLMNAPVAGMVTRLFSQKGIELVIGAVPEIVENGMGFILLGNGEESYVRDLRRLAQAYPGRFRFEEAFNEPLAHRIMAGADMLCVPSLYEPCGLTQMYALQYGTIPVARATGGLADTVRDIKAFAGKGNGFTFDAFSPGAFA 431          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_LACS1 (Glycogen synthase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118) GN=glgA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40
Identity = 100/231 (43.29%), Postives = 135/231 (58.44%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFS 684
            +N+MK GIL +D V TVSP YA E+ + E  G  LD I+R     ++GI+NG+D +  NP TDK +   Y A   +  K   K ALQ E GLP  +++PVI  + RL  QKG  ++ + + + ++ +VQ+IVLGTG    E         YP+K      F++ LA  I AGAD  L+PS FEPCGL Q+ +MRYGT+PIV   GGL D+V+       EG TGF    FS
Sbjct:  199 VNFMKTGILYADKVNTVSPTYASEIQT-EAFGQGLDEILRMHNWKLRGILNGIDYERNNPATDKNLVANYSAKK-LKGKVKDKLALQKEFGLPQRKDVPVIAMVSRLTAQKGFQLVVSEMQNLVQFDVQVIVLGTGDANFEHDFRYFADTYPDKVGAAITFDVGLAQRIYAGADMFLMPSAFEPCGLSQMISMRYGTLPIVHQIGGLQDSVQPFNPVTGEG-TGFGFHDFS 426          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_LACPL (Glycogen synthase OS=Lactobacillus plantarum GN=glgA PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.347e-40
Identity = 97/215 (45.12%), Postives = 135/215 (62.79%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL--KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            ++NW+K GI  +D V TVSP YAQE+ +    G  LD ++R    K  GI+NG+D+Q ++P TD  +   Y A    D KP    K ALQ  +GLPV +N+PV+  + RL +QKG D+L  A+  F+++ +VQ+IVLGTG   +E+ L   +  YP+K     +F+  LA  I A +D  L+PS FEPCGL Q+ AM YGT+PIV + GGL DTV
Sbjct:  199 QVNWLKGGINFADAVNTVSPTYAQEIQTPAF-GERLDGVLRANRYKLSGILNGIDMQLYDPATDLALTANYSAK---DLKPKRQNKRALQRRLGLPV-KNMPVLAVVSRLTKQKGIDLLLDALNPFLQQQDVQLIVLGTGDPALERALRTYQSAYPQKVVAAIQFDTQLAQQIYAASDIFLMPSAFEPCGLSQMMAMHYGTLPIVHAVGGLRDTV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_LEPCP (Glycogen synthase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=glgA PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40
Identity = 93/235 (39.57%), Postives = 134/235 (57.02%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--------EEGFTGFQMGSFSVD 690
            +I++MK G+  +D + TVSP YA+E + G ++G  LD ++R     + GI+NG+D   WNP  D  I   Y     +  K   K  LQAE+GL  D  +P++  + RL EQKG  ++  A+P  I+   Q  +LG+G   ME +  +L   +P  A     ++   AH +IAG+D IL+PSRFEPCGL QL+ ++YGT+P+V   GGLVDTV        +   TGF    FS D
Sbjct:  206 QISFMKGGLYFADRITTVSPTYARE-IQGAEQGCGLDGLLRDRDADLSGILNGVDDAVWNPAGDALIPATYTRRK-LTGKAQCKATLQAELGLAEDPAVPLLCVVSRLTEQKGLHLVLQALPALIERGFQFALLGSGDAGMENEFRRLAEQHPTAAAVRLGYDEAFAHRLIAGSDLILVPSRFEPCGLTQLYGLKYGTLPVVRRVGGLVDTVADARLETLDHDATGFVFDDFSAD 438          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_BACSU (Glycogen synthase OS=Bacillus subtilis GN=glgA PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.759e-40
Identity = 97/236 (41.10%), Postives = 143/236 (60.59%), Query Frame = 1
Query:    4 CERFKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGF-TGFQMGSFS 684
            C  F +N+MKAGI+ +D V TVSP Y  E+++    G +L+ ++  R+  + GI+NG+D   + P +D YI  +YD+  +   K   K  LQ  +GLP   +IP+I  + RL +QKG D++   +   ++E ++Q++VLGTG++  E      E  + EK R    F+ PLAH I AG+D  L+PS+FEPCGL QL A++YG +PIV  TGGL DTV     EEG   GF   +F+
Sbjct:  194 CNGF-VNFMKAGIIAADHVTTVSPTYRNEIMTPY-YGEQLEQVLQYREDDVTGILNGIDDTFYQPKSDPYIEAQYDSGDLA-CKLENKTKLQQRMGLPEKNDIPLISMVTRLTKQKGLDLVRRIMHELLEEQDIQLVVLGTGEREFEDYFRYAEFAFHEKCRAYIGFDEPLAHQIYAGSDMFLMPSKFEPCGLGQLIALQYGAIPIVRETGGLYDTVRAYQEEEGTGNGFTFSAFN 426          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_RHOP54.630e-4144.55Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA1_GEOMG4.630e-4142.65Glycogen synthase 1 OS=Geobacter metallireducens (... [more]
GLGA_RHOPS6.047e-4142.18Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA_BACCN6.047e-4145.28Glycogen synthase OS=Bacillus cereus subsp. cytoto... [more]
GLGA_ELUMP7.898e-4139.83Glycogen synthase OS=Elusimicrobium minutum (strai... [more]
GLGA_DESAA7.898e-4139.24Glycogen synthase OS=Desulfatibacillum alkenivoran... [more]
GLGA_LACS11.347e-4043.29Glycogen synthase OS=Lactobacillus salivarius subs... [more]
GLGA_LACPL1.347e-4045.12Glycogen synthase OS=Lactobacillus plantarum GN=gl... [more]
GLGA_LEPCP1.759e-4039.57Glycogen synthase OS=Leptothrix cholodnii (strain ... [more]
GLGA_BACSU1.759e-4041.10Glycogen synthase OS=Bacillus subtilis GN=glgA PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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