FC868685

Overview
NameFC868685
Unique NameFC868685
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length704
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_RHOP2 (Glycogen synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=glgA PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.298e-40
Identity = 93/214 (43.46%), Postives = 129/214 (60.28%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP---VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            I ++KAG+  +D + TVSP YA E + G D G+ L+ ++R     + GI+NG+D + W+P  D+ I   YD  T+  A+   K+ALQ+  GL   RN P   + G I RL  QKG D+L   +P  + E  Q+ +LG G  P+E+      + YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  200 IGYLKAGLQLADRITTVSPTYALE-IQGPDAGMGLEGLLRLRADRLSGILNGIDTRVWDPTADELIPATYDIETI-GARARNKQALQSRFGL---RNAPDALLYGVISRLSWQKGLDMLLDVLPGMLAEGAQLALLGAGDTPLEQGFRAAALKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOMG (Glycogen synthase 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.920e-40
Identity = 97/234 (41.45%), Postives = 133/234 (56.84%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVD 690
            +IN +K  IL +D + TVS  Y  E++S   +G  L+ ++  R+  + GI+NG+D +EWNP  D+ I   Y + ++   K   K  LQ E+GL    +IP+IG +GR+ EQKG D++   +P F  E +Q+++LGTG   +  QL +      +       F  PLA  I AG D  L+PSRFEPCGL QL A+ YGTVPIV  TGGL DTV        EG  GF    FS D
Sbjct:  201 RINLLKGAILAADAITTVSETYCHEILS-PGQGCGLEGVLERRQADLAGILNGLDSEEWNPSLDRRIFRNYSSKSLA-GKGADKRELQRELGLKAGASIPIIGMVGRIVEQKGIDLVIDLLPRFAAEELQLVILGTGDLRLMHQLHEFRNKGVKNVSINLGFKEPLAPKIYAGCDMFLMPSRFEPCGLSQLIALSYGTVPIVRRTGGLADTVIDVTANPREG-NGFSFTEFSAD 431          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_STRMU (Glycogen synthase OS=Streptococcus mutans GN=glgA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.119e-40
Identity = 93/230 (40.43%), Postives = 134/230 (58.26%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 684
            +NWMKA +L +D V TVSP YA+E+++ E  G  LD I+R     + G+VNG+D   ++P TD ++ V +     +  K   K ALQ  VGLPV  ++P++G + RL +QKG  ++   +   ++ ++QI++LGTG    E         YP+K      F++ LA  I A +D  L+PS FEPCGL Q+ AMRYGT+P+V   GGL DTV      E+  TGF    FS
Sbjct:  198 LNWMKAAVLYADRVTTVSPSYAKEIMTPEF-GKGLDQIMRMESGKLSGVVNGIDTDLFDPETDPHLAVHFSKDD-LSGKAKNKAALQERVGLPVREDVPLVGIVSRLTDQKGFQLVVDQLNTMMQLDLQIVLLGTGYADFENAFAWFGHAYPDKMSANITFDLELAQQIYAASDIFLMPSAFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVIPYNEFEKTGTGFGFQDFS 425          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_POLNA (Glycogen synthase OS=Polaromonas naphthalenivorans (strain CJ2) GN=glgA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.119e-40
Identity = 93/216 (43.06%), Postives = 126/216 (58.33%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            ++++MKAG+  +  + TVSP YA E+ + E  G  LD +IR  G  + GI+NG+D   WNP +D  I   Y A  ++D K L K ALQ E+GL VD   PV   + RL  QKG D+L  A+P  +        Q+ V G G   +E         +P +      ++  LAH I+AGAD +L+PSRFEPCGL QL+A+RYGTVP+V   GGL DTV
Sbjct:  200 QLSFMKAGLKYAHRITTVSPTYAHEIAT-EAFGCGLDGVIRARGADVSGILNGVDGAVWNPASDPLIAAPYSAD-MLDGKALCKAALQRELGLAVDAGAPVFAVVSRLTSQKGLDLLLDALPALLNFPAAGGPQLAVQGNGDPALEAAFTAAAAAHPGRVAVRLVYDEALAHRIMAGADAMLVPSRFEPCGLTQLYALRYGTVPVVRHVGGLADTV 413          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_BACST (Glycogen synthase OS=Bacillus stearothermophilus GN=glgA PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.119e-40
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 648
            +++MK  ++ SD++ TVSP Y +E+ +    G  LD ++R  +  + GI+NG+D + +NP  D ++   Y   T  + K L K ALQ + GLP   ++P+I  + R+  QKG D++       + E++Q++VLGTG    E+   Q+   YP K      F+ PLAH I AGAD  LIPS FEPCGL Q+ A+RYGT+PIV  TGGL DTV+
Sbjct:  198 VSFMKGALVASDLITTVSPTYKEEIQTAY-YGERLDGLLRARRDDLLGILNGIDDEFYNPEADPFLTATYSVHT-RERKQLNKRALQRQFGLPEWDDVPLIAMVTRMTAQKGLDLVTCVFHEMMSEDMQLVVLGTGDWRFEQFFSQMAAAYPGKVGVYIGFHEPLAHQIYAGADLFLIPSLFEPCGLSQMIALRYGTIPIVRETGGLNDTVQ 407          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOSL (Glycogen synthase 2 OS=Geobacter sulfurreducens GN=glgA2 PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.119e-40
Identity = 101/240 (42.08%), Postives = 138/240 (57.50%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG--IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK------FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVD 690
            ++N MK  IL +D++ TVS  Y +E+++   +G  L+ ++ + G  + GIVNG+D  EWNP  DK I   Y A  +   K   K  LQ E+G+P   ++P+IG + RL EQKG D++   +P   +  +Q ++LGTG          LE L   +++G A       FN PLA  I AG+D  L+PSRFEPCGL QL AMRYGTVP+V  TGGL DTV        EG TGF    F+ D
Sbjct:  201 QLNLMKGAILTADLITTVSETYRREIMT-PTQGCGLEGVLARRGDDLFGIVNGIDTDEWNPAADKRIFRNYSARALA-GKAADKLELQRELGMPAAPSVPLIGMVSRLAEQKGIDLVLELLPRLAESELQFVLLGTGNACY------LERLNSFRSKGAANISINLGFNDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG-TGFTFEDFTAD 431          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_PETMO (Glycogen synthase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glgA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.732e-40
Identity = 93/214 (43.46%), Postives = 135/214 (63.08%), Query Frame = 1
Query:   16 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNI--IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 651
            K+N +K GIL S+++ TVSP YA+E+ S E+ G  L+ I  +R   + GI+NG+D   ++PL D +I   +      + K   K +LQ  +GL  D NI +I FIGRL EQKG D+++  +   +  ++Q ++LGTG K  E+    L  LYP+K      F++ LA  I AG+D  L+PS++EPCGL Q+++MRYGTVP+V  TGGL DTV E
Sbjct:  200 KVNVLKGGILFSNIINTVSPTYAKEIQS-EEYGYGLEGILKVRSEDLFGILNGIDYSIYDPLKDPHI---FHPIESYEDKLKNKTSLQEYLGLTKDENITLISFIGRLFEQKGIDLISKIMDLLLLNDIQFVLLGTGDKKYEEYFVTLTKLYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSE 409          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_LACCB (Glycogen synthase OS=Lactobacillus casei (strain BL23) GN=glgA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.732e-40
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            INW+K GI  +D+V TVSP YA+E+ +    G  LD  +RK   K  GI+NG+D + +NP TD+ +   YDA  +   K   K+ALQ E+ LP  R  P+   + RL  QKG+D+L  A+ +F ++ NVQ++VLGTG + +E+ L  L+  +P +      F+  LA  I AGAD+ ++PS FEP GL Q+ AMRYGT+PIV  TGGL D+V
Sbjct:  200 INWLKGGINYADLVSTVSPSYAKEIQTPAF-GEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKNLA-GKAKDKKALQDEMHLP-KRTDPLFAMVSRLTRQKGADLLVDALENFLVQNNVQVVVLGTGDQDLEEDLSSLQDRFPGQLAVRIDFDEGLAQRIYAGADYFMMPSAFEPSGLAQMMAMRYGTLPIVHETGGLRDSV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_LACC3 (Glycogen synthase OS=Lactobacillus casei (strain ATCC 334) GN=glgA PE=3 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 8.732e-40
Identity = 95/212 (44.81%), Postives = 134/212 (63.21%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK--GIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF-IKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            INW+K GI  +D+V TVSP YA+E+ +    G  LD  +RK   K  GI+NG+D + +NP TD+ +   YDA  +   K   K+ALQ E+ LP  R  P+   + RL  QKG+D+L  A+ +F ++ NVQ++VLGTG + +E+ L  L+  +P +      F+  LA  I AGAD+ ++PS FEP GL Q+ AMRYGT+PIV  TGGL D+V
Sbjct:  200 INWLKGGINYADLVSTVSPSYAKEIQTPAF-GEHLDGTLRKQSGKLVGILNGIDSEVYNPATDQNLAYNYDAKNLA-GKAKDKKALQDEMHLP-KRTDPLFAMVSRLTRQKGADLLVDALENFLVQNNVQVVVLGTGDQDLEEDLSSLQDRFPGQLAVRIDFDEGLAQRIYAGADYFMMPSAFEPSGLAQMMAMRYGTLPIVHETGGLRDSV 408          
BLAST of FC868685 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPT (Glycogen synthase OS=Rhodopseudomonas palustris (strain TIE-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.140e-39
Identity = 90/211 (42.65%), Postives = 124/211 (58.77%), Query Frame = 1
Query:   19 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV 645
            I ++KAG+  +D + TVSP YA E + G + G+ LD ++  R   + GI+NG+D   WNP +D  I   YD  ++  A+   K+ LQA  GL  +    + G I RL  QKG D+L  A+P  I    Q+ +LG+G   +E+        YP +   V  ++  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV
Sbjct:  200 IGYLKAGLQLADRITTVSPSYAAE-IQGSEAGMGLDGLLQLRADRLSGILNGIDTDVWNPASDALISATYDVESIA-ARARNKKVLQARFGLKPEPGALLYGVISRLSWQKGLDLLLQALPQLIGGGAQLALLGSGDAELEQGYAAAARKYPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTV 408          
The following BLAST results are available for this feature:
BLAST of FC868685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 364
Match NameE-valueIdentityDescription
GLGA_RHOP22.298e-4043.46Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA2_GEOMG3.920e-4041.45Glycogen synthase 2 OS=Geobacter metallireducens (... [more]
GLGA_STRMU5.119e-4040.43Glycogen synthase OS=Streptococcus mutans GN=glgA ... [more]
GLGA_POLNA5.119e-4043.06Glycogen synthase OS=Polaromonas naphthalenivorans... [more]
GLGA_BACST5.119e-4041.51Glycogen synthase OS=Bacillus stearothermophilus G... [more]
GLGA2_GEOSL5.119e-4042.08Glycogen synthase 2 OS=Geobacter sulfurreducens GN... [more]
GLGA_PETMO8.732e-4043.46Glycogen synthase OS=Petrotoga mobilis (strain DSM... [more]
GLGA_LACCB8.732e-4044.81Glycogen synthase OS=Lactobacillus casei (strain B... [more]
GLGA_LACC38.732e-4044.81Glycogen synthase OS=Lactobacillus casei (strain A... [more]
GLGA_RHOPT1.140e-3942.65Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]

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Properties
Property NameValue
Genbank descriptionC31003E03EF AbioticL1 Citrus clementina cDNA clone C31003E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868685 ID=FC868685; Name=FC868685; organism=Citrus clementina; type=EST; length=704bp
ACCTGTGAGAGGTTCAAAATCAACTGGATGAAAGCTGGAATATTAGAATC
AGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTG
GTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAAAACTGGCATT
AAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACCCCTTGACTGA
CAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTC
AGATATTCTTGCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGA
TAATAGTCCTTGGTACTGGCAAAAAACCAATGGAGAAGCAGCTTGAACAG
TTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGAAATTCAATAT
TCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGA
AGGCTTTACAGGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTG
TGGA
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