FC868691

Overview
NameFC868691
Unique NameFC868691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11062 contig Ccv1_Contig11062:30..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.306e-37
Identity = 83/184 (45.11%), Postives = 107/184 (58.15%), Query Frame = 3
Query:  135 SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAA---FVLCRLFRKPEEKVDVLKYDEVETTESPDTNN 677
            +LP GFRF PTDEEL+  YL  +       V VI EID+ +  PW+LP +++    + EW+FF  RDRKYPNG R NRA   GYWKATG D+ I     G    +G+KK LVFY G+APKG +TNWIMHEYR    D   S+ K +      +VLCR++ K       L     + TE   T++
Sbjct:   49 NLPAGFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYG--EKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-----GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAAEKPTEKMSTSD 225          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC94_ARATH (Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.624e-37
Identity = 78/173 (45.09%), Postives = 108/173 (62.43%), Query Frame = 3
Query:  147 GFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYR-PTREDLLDSS------------------TKPSQAAFVLCRLFRK 608
            GFRF PTDEEL++ YL+ K+  +    ++I ++D+ + +PWDLP L+ +   + EW+F+CPRDRKY N  R NR T  G+WKATG DR I S    +  CIG+KK+LVFYRGRA KG +T+W+MHE+R P+  D   SS                    PS  A+ +CR+F+K
Sbjct:   23 GFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWDLPKLAAMG--EKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYS--LDSTRCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWAICRIFKK 191          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC67_ORYSJ (NAC domain-containing protein 67 OS=Oryza sativa subsp. japonica GN=NAC67 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 6.218e-36
Identity = 78/164 (47.56%), Postives = 102/164 (62.20%), Query Frame = 3
Query:  135 SLPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAA---FVLCRLFRKPEE 617
            +LP GFRF PTDEEL+ HYL  +  GR + V +I E+D+   +PWDLP  ++      EW+FF PRDRKYPNG R NRA  +GYWKATG D+ +     G  A  G+KK LVFY G+ P+G +T WIMHEYR  ++    ++          +VLCRL+ K  E
Sbjct:   16 NLPPGFRFHPTDEELVAHYLCPRAAGRAAPVPIIAELDLYRHDPWDLPHRALFGRR--EWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPVLHN--GRTA--GIKKALVFYHGKPPRGVKTEWIMHEYRLAKKGGAAAAAGAGALRLDDWVLCRLYNKKNE 173          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.809e-35
Identity = 75/188 (39.89%), Postives = 114/188 (60.64%), Query Frame = 3
Query:  147 GFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRK-----------PEEKVDVLKYDEVETTESPDTNN 677
            GFRF PTDEEL+ +YLR K+  +  ++E+I +ID+ + +PWDLP +S +   + EW+FFC R RKY N +R NR T +G+WKATG D+ + S       C+G+KK+LV+Y G A KG +T+W+MHE+R       DS  + ++  + LCR+F++           P  K  +   D    T S D+++
Sbjct:   21 GFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSV--GEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSNL----DCVGLKKSLVYYLGSAGKGTKTDWMMHEFRLPSTTKTDSPAQQAE-VWTLCRIFKRVTSQRNPTILPPNRKPVITLTDTCSKTSSLDSDH 201          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 8.979e-35
Identity = 83/180 (46.11%), Postives = 112/180 (62.22%), Query Frame = 3
Query:  111 KMAVISM--ESLPLGFRFRPTDEELINHYL-RLKINGRDSEVEVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYR------PTREDLLDSSTKPSQAAFVLCRLFRKPEEKV 623
            K + ISM    LP GFRF P D+EL+  YL R  ++       V+ ++D+ + EPWD+P ++ +  +D  W+F+  RDRKY  GLR+NRAT  GYWKATGKDRTI  +       +GM+KTLVFY+GRAP+G +T+W+MHE+R      P    L  SS K     +VLCR+F K  E V
Sbjct:    8 KESSISMVEAKLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKD--WYFYSQRDRKYATGLRTNRATATGYWKATGKDRTILRK----GKLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSL--SSPKED---WVLCRVFHKNTEGV 176          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC77_ORYSJ (NAC domain-containing protein 77 OS=Oryza sativa subsp. japonica GN=NAC77 PE=2 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 3
Query:  138 LPLGFRFRPTDEELINHYLRLKINGRDSEVEVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNA------------CIGMKKTLVFYRGRAPKGERTNWIMHEYR 530
            LP GFRF PTD E+I  YL  K+         I E+D+ + EPWDLP  S  K  + EW+FF  +D KYP G+R+NRAT+ GYWKATGKDR I  + A  N              +GMKKTLVFY GRAPKG +TNW+MHE+R
Sbjct:   19 LPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLP--SKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFR 159          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.297e-33
Identity = 75/159 (47.17%), Postives = 98/159 (61.64%), Query Frame = 3
Query:  144 LGFRFRPTDEELINHYLRLKINGRDSEV-EVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEE 617
            +G+RF PT EELINHYL+ KI G+   V E I EI++C  +P  LP LS IK++DP W+FFCP++        + R T +GYWKATG DR I+  K G    IG+KKTLV+Y GR PKG  T W+MHEY  T            Q  +V+C++  K E+
Sbjct:    6 VGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCPKEYTSAKKKVTKRTTSSGYWKATGVDRKIKD-KRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHIT-------CLPQDQRNYVICQVMYKGED 156          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 5.099e-30
Identity = 71/162 (43.83%), Postives = 98/162 (60.49%), Query Frame = 3
Query:  141 PLGFRFRPTDEELINHYLRLK-INGRDSEV-EVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQ-AAFVLCRLFRKPEE 617
            P+GFRFRP DEE+++HYLR K ++   S V EVI  +D+C  EPWDLP  S+IK+ D  W+FF  ++ KY  G +  R T +G+WK TGK  T+  RK G    IG K+ LVF   +   G +T+W+MHEY  T       S  P+Q   + +C++  K EE
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFSVKEMKYNRGDQQRRRTNSGFWKKTGKTMTV-MRKRGNREKIGEKRVLVF---KNRDGSKTDWVMHEYHAT-------SLFPNQMMTYTVCKVEFKGEE 154          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.483e-29
Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 3
Query:  132 ESLPLGFRFRPTDEELINHYLRLKINGR--DSEVEVIPEIDVCELEPWDLPGLSVIKT--EDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLF 602
            + + +GFRF PT+EEL++ YLR ++ GR  DS   VIP +DV E+EP  LP ++ ++   +  +WFFF PR  +   G R +R T +GYWKATG    + S+    N  IG KKT+VFY G+AP G +T W M+EY    E +  S+    +  F LCR++
Sbjct:    3 DEVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSKD---NKMIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNASTIPKLRREFSLCRVY 160          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.256e-28
Identity = 65/133 (48.87%), Postives = 89/133 (66.92%), Query Frame = 3
Query:  144 LGFRFRPTDEELINHYLRLKINGRDSEV-EVIPEIDVCELEPW-DLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPT 536
            +G+RF PT EE+INHYL+ K+ G+   V E I EI++   +P  DLP L+ I++ED EW+FF P +   PN ++  R T +G+WK TG DR IR  K G    IG+KKTLV++ G++P G RT W+MHEY  T
Sbjct:    6 IGYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRD-KRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHIT 137          
The following BLAST results are available for this feature:
BLAST of FC868691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NA102_ARATH4.306e-3745.11NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC94_ARATH5.624e-3745.09Putative NAC domain-containing protein 94 OS=Arabi... [more]
NAC67_ORYSJ6.218e-3647.56NAC domain-containing protein 67 OS=Oryza sativa s... [more]
NAC42_ARATH1.809e-3539.89NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC22_ARATH8.979e-3546.11NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC77_ORYSJ3.412e-3451.75NAC domain-containing protein 77 OS=Oryza sativa s... [more]
NAC69_ARATH1.297e-3347.17NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC4_ARATH5.099e-3043.83NAC domain-containing protein 4 OS=Arabidopsis tha... [more]
NAC90_ARATH1.483e-2942.24NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC68_ARATH1.256e-2848.87NAC domain-containing protein 68 OS=Arabidopsis th... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31003E10EF AbioticL1 Citrus clementina cDNA clone C31003E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868691 ID=FC868691; Name=FC868691; organism=Citrus clementina; type=EST; length=731bp
AGAGACAGATACAATACAAACATCAGAATTGCACAAAAATTTAGTAAAGT
GAAAAAAAAAAGCTAAGAAATTGAACATCTGAATTTCTGTCTGAGATTAA
TTAGTAGAAGAAGATGGCAGTAATATCGATGGAATCTCTGCCGTTGGGTT
TCAGATTCAGACCGACAGACGAGGAACTGATCAACCACTACCTCAGATTA
AAGATCAACGGCCGTGATTCGGAGGTCGAGGTTATTCCCGAGATCGATGT
TTGCGAACTGGAGCCGTGGGACTTGCCTGGATTATCGGTGATAAAGACAG
AAGATCCAGAGTGGTTCTTTTTCTGCCCGCGCGATAGAAAATACCCGAAC
GGGCTTCGTTCGAATCGTGCAACAGAAGCTGGATACTGGAAAGCTACGGG
CAAGGATCGCACCATAAGGAGCCGAAAGGCGGGGACTAATGCATGCATAG
GAATGAAAAAGACATTGGTGTTTTATAGGGGTCGTGCTCCTAAAGGTGAA
CGCACCAATTGGATCATGCACGAGTACCGCCCCACCCGTGAAGATCTCCT
AGATAGCTCTACCAAGCCTAGTCAGGCTGCATTTGTCCTCTGTCGCTTGT
TCAGGAAGCCAGAAGAGAAGGTCGATGTCCTAAAGTATGACGAAGTGGAA
ACAACAGAATCTCCTGATACAAATAATCATCTCTCGATGATACCTCATCA
GATCTTGGTTCAGAACCCGCATGTCCAACTA
back to top