FC868691

Overview
NameFC868691
Unique NameFC868691
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length731
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11062 contig Ccv1_Contig11062:30..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.619e-26
Identity = 73/185 (39.46%), Postives = 102/185 (55.14%), Query Frame = 3
Query:  141 PLGFRFRPTDEELINHYLRLK-INGRDSEV-EVIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQ-AAFVLCRL-FRKPEEKVDVLKYDEVETTES--PDTNN 677
            P+GFRFRPTD E+++ YLR K +    S V EVI  +D+C  +PWDLP  S +KT D  W+FF  ++ KY  G R  R T++G+WK TG    I  RK G    IG K+ LVF   +   G +++W MHEY  T        + P+Q   + LC++ F+    +  V     ++ T S  P TNN
Sbjct:    4 PVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDI-MRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEYHAT-------FSSPNQIMTYTLCKVKFKGERREFSVATGSGIKHTHSLIPPTNN 177          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC61_ARATH (Putative NAC domain-containing protein 61 OS=Arabidopsis thaliana GN=NAC061 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.781e-25
Identity = 73/195 (37.44%), Postives = 109/195 (55.90%), Query Frame = 3
Query:  132 ESLPLGFRFRPTDEELINHYLRLKINGRDSEVE-VIPEIDVCELEPWDLPGLSV--IKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLF-RKPEEKVDV---LKYDEVETTE------SPDTNN 677
            E L +GFRF PT+ EL+ +YLR+++ G ++ +  +IP +DV  +EP  LP L+    + +  +W FF PR  +   G R +R T +GYWKATG    + S     N  IG+KKT+VFY G+AP G +T W M+EY+    +    ST P   +    R F R+P E   +   L  + VET+       SP+T++
Sbjct:    3 EELSVGFRFYPTEVELLTYYLRIQLGGGNATIHSLIPILDVFSVEPTQLPNLAGERCRGDAEQWIFFVPRQEREARGGRPSRTTGSGYWKATGSPGPVFSPD---NRVIGVKKTMVFYTGKAPTGRKTKWKMNEYKAV--ETASVSTIPKSGS---SRAFDRRPTEAYAIERNLPSNGVETSSRATISTSPETSH 189          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.460e-24
Identity = 67/177 (37.85%), Postives = 98/177 (55.37%), Query Frame = 3
Query:  144 LGFRFRPTDEELINHYLRLKINGRDS-EVEV-IPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTIRSR----KAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEYRPTREDLLDSSTKPSQAAFVLCRLFRKPEEKVDVLKYDEVETT 656
            +GF FRP DEEL+ HYLR KI G  S +VEV I E+++C  +PW+L   S  K+ D  W+FF  R+     G R +R T +G WK TG+   ++ +      G    IG K+ LVF  GR P   +++W++HE+     DLL       Q  +V+CRL  K ++  D+L    ++ T
Sbjct:    5 VGFGFRPNDEELVGHYLRNKIEGNTSRDVEVAISEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENN--KGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEF---HYDLLPE----HQRTYVICRLEYKGDD-ADILSAYAIDPT 171          
BLAST of FC868691 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.536e-21
Identity = 57/132 (43.18%), Postives = 83/132 (62.88%), Query Frame = 3
Query:  141 PLGFRFRPTDEELINHYLRLKINGRD-SEVE-VIPEIDVCELEPWDLPGLSVIKTEDPEWFFFCPRDRKYPNGLRSNRATEAGYWKATGKDRTI-RSRKAGTNACIGMKKTLVFYRGRAPKGERTNWIMHEY 527
            P+G RF PTDEE++  YL  K + RD S V+  I  + VC L+PW+LP  S IK +D  W FF P++ KY  G +  R T++G+WK+TG+ + I R+R+      IG KK L+FY     K  +++W++HEY
Sbjct:    4 PVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIMRNRQQ-----IGEKKILMFY---TSKESKSDWVIHEY 127          
The following BLAST results are available for this feature:
BLAST of FC868691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC5_ARATH2.619e-2639.46NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC61_ARATH3.781e-2537.44Putative NAC domain-containing protein 61 OS=Arabi... [more]
NAC1_ARATH5.460e-2437.85NAC domain-containing protein 1 OS=Arabidopsis tha... [more]
NAC3_ARATH2.536e-2143.18NAC domain-containing protein 3 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC31003E10EF AbioticL1 Citrus clementina cDNA clone C31003E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868691 ID=FC868691; Name=FC868691; organism=Citrus clementina; type=EST; length=731bp
AGAGACAGATACAATACAAACATCAGAATTGCACAAAAATTTAGTAAAGT
GAAAAAAAAAAGCTAAGAAATTGAACATCTGAATTTCTGTCTGAGATTAA
TTAGTAGAAGAAGATGGCAGTAATATCGATGGAATCTCTGCCGTTGGGTT
TCAGATTCAGACCGACAGACGAGGAACTGATCAACCACTACCTCAGATTA
AAGATCAACGGCCGTGATTCGGAGGTCGAGGTTATTCCCGAGATCGATGT
TTGCGAACTGGAGCCGTGGGACTTGCCTGGATTATCGGTGATAAAGACAG
AAGATCCAGAGTGGTTCTTTTTCTGCCCGCGCGATAGAAAATACCCGAAC
GGGCTTCGTTCGAATCGTGCAACAGAAGCTGGATACTGGAAAGCTACGGG
CAAGGATCGCACCATAAGGAGCCGAAAGGCGGGGACTAATGCATGCATAG
GAATGAAAAAGACATTGGTGTTTTATAGGGGTCGTGCTCCTAAAGGTGAA
CGCACCAATTGGATCATGCACGAGTACCGCCCCACCCGTGAAGATCTCCT
AGATAGCTCTACCAAGCCTAGTCAGGCTGCATTTGTCCTCTGTCGCTTGT
TCAGGAAGCCAGAAGAGAAGGTCGATGTCCTAAAGTATGACGAAGTGGAA
ACAACAGAATCTCCTGATACAAATAATCATCTCTCGATGATACCTCATCA
GATCTTGGTTCAGAACCCGCATGTCCAACTA
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