FC868694
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868694 vs. ExPASy Swiss-Prot
Match: RS1_RHIME (30S ribosomal protein S1 OS=Rhizobium meliloti GN=rpsA PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 31/111 (27.93%), Postives = 62/111 (55.86%), Query Frame = 2 Query: 110 VVMADRKFRKLIVSVRPKEREELVEKKRSLMAKLRIGDIVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVVEAKVHQLDFALERIFLSLKEITPDP 442 ++ D++ ++VS R E E++ ++ L G +V+ +K IT +G FV++ G+ L+H T+++W P+ IGQ V+ ++ +++ RI L +K++ DP Sbjct: 162 ILKMDKRRGNIVVSRRTVLEESRAEQRSEIVQNLEEGQVVEGVVKNITDYGAFVDLGGIDGLLHVTDMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQLESDP 272
BLAST of FC868694 vs. ExPASy Swiss-Prot
Match: RS1_BUCAP (30S ribosomal protein S1 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=rpsA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 34/132 (25.76%), Postives = 67/132 (50.76%), Query Frame = 2 Query: 47 IYDQEKLKFLLSFLGQKINVNVVMADRKFRKLIVSVRPKEREELVEKKRSLMAKLRIGDIVKCCIKKITYFGVFVEVEGVPALIHQTEVSWDATLDPASYFKIGQVVEAKVHQLDFALERIFLSLKEITPDP 442 + D ++ + G+++ V+ D+K ++VS R E ++ L+ L+ G +K +K +T +G FV++ GV L+H T+++W P+ +G + K+ + D R+ L LK++ DP Sbjct: 135 LVDVRPVRDTIHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSAERDQLLESLQEGIEIKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDEINVKILKFDKERTRVSLGLKQLGEDP 266 The following BLAST results are available for this feature:
BLAST of FC868694 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868694 ID=FC868694; Name=FC868694; organism=Citrus clementina; type=EST; length=721bpback to top |