FC868701

Overview
NameFC868701
Unique NameFC868701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14547 contig Ccv1_Contig14547:16..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PYRKO (Anthranilate synthase component II OS=Pyrococcus kodakaraensis GN=trpG PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21
Identity = 64/135 (47.41%), Postives = 87/135 (64.44%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTP---QDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++++N DSF +NL +Y   L    +V  N  +TV EL+R +P GV+ISPGPG P   ++ G S + VLE G  VP+ GVC+G Q +  AFGGK+ R  +   HGK+S V +D K   G+L G+ NP TAGRYHS
Sbjct:    2 IVLVNNRDSFVWNLAEY-ASLFDRVKVVPNT-ITVGELRRLDPDGVIISPGPGHPLERREVGNSPEIVLEAG--VPILGVCLGHQIIATAFGGKVGR--VKPRHGKASPVKHDGK---GVLRGIKNPLTAGRYHS 127          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_HAEIN (Anthranilate synthase component II OS=Haemophilus influenzae GN=trpG PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.424e-21
Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+ +DN+DSFTYNL      LG++  +YRND   E  VE         + +SPGPGTP ++GI L  +  L   VP+ GVC+G Q + +AFGGK+V +   V+HGK S + +D    + +   L+NP    RYHS
Sbjct:    4 ILFLDNFDSFTYNLVDQFRVLGHNVTIYRNDCDLEKLVETALNTPDTILALSPGPGTPSEAGILLPLIERLKNQVPIIGVCLGHQALIQAFGGKVVHAG-EVLHGKVSRISHD---NEAMFKDLANPMPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_SERMA (Anthranilate synthase component II OS=Serratia marcescens GN=trpG PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.172e-21
Identity = 49/135 (36.30%), Postives = 84/135 (62.22%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFTYNL   +   G+   +YRN    E+ +E L+      +++SPGPGTP ++G   + +  L   +P+ G+C+G Q + EA+GG++ ++   ++HGK+S + +D    +G+ AG++NP    RYHS
Sbjct:    4 ILLLDNVDSFTYNLVDQLRASGHQVVIYRNQIGAEVIIERLQHMEQPVLMLSPGPGTPSEAGCMPELLQRLRGQLPIIGICLGHQAIVEAYGGQVGQAG-EILHGKASAIAHD---GEGMFAGMANPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG1_HALMA (Anthranilate synthase component II OS=Haloarcula marismortui GN=trpG1 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21
Identity = 55/135 (40.74%), Postives = 85/135 (62.96%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQ---DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++ +DN+DSFTYNL +Y+ E     EV RN   ++++++  +P  +++SPGPG P+   D G++L  + E+ P VP  GVC+GL+    A+GG I R+P  + HGK+  + +D K   G+ AGL   F  GRYHS
Sbjct:   18 VLFVDNFDSFTYNLVEYVSEHA-ETEVVRNTA-SLDDVEAFDPDAIILSPGPGHPKNERDVGVTLDVLREVSPDVPTLGVCLGLESAVYAYGGTIGRAPEPI-HGKAFPIDHDGK---GVFAGLEQGFQGGRYHS 146          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_PHACH (Anthranilate synthase component 2 OS=Phanerochaete chrysosporium GN=TRPC PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDN+DSFT+NL Q +  LG    V RND +    + +   + +++SPGPG PQ DSGIS + +      VP+ GVCMGL+C+ + FGG+I  +   +MHGK S + +D +   G    L     + RYHS
Sbjct:   13 ILMIDNFDSFTWNLYQSLCLLGADVTVIRNDAIPRSAIPQLRIKRLIVSPGPGHPQTDSGISREAIKYFAGKVPIMGVCMGLECVVDVFGGQIAYAG-EIMHGKVSGIRHDAR---GCFKDLPQGIQSTRYHS 141          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_HALVO (Anthranilate synthase component II OS=Halobacterium volcanii GN=trpG PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 54/139 (38.85%), Postives = 81/139 (58.27%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVY----RNDELTVEELKRKNPRGVLISPGPGTPQ---DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++V+DN+DSFTYNL +Y  E     E      R    +++E++  +P  ++ISPGPG P+   D G++   + EL   +P  GVC+GL+    A+GG I  +P   +HGK+  V +D     G+ AGL + F AGRYHS
Sbjct:    4 LVVVDNFDSFTYNLVEYFSEQTVEGEPLDIEVRKTTASLDEIRDLDPDAIVISPGPGHPKNDRDVGVTNDVLTELSTEIPTLGVCLGLEAAVYAYGGTIGHAP-DAIHGKAFPVDHDGA---GVFAGLEDGFPAGRYHS 138          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_YERPE (Anthranilate synthase component II OS=Yersinia pestis GN=trpG PE=4 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19
Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFTYNL   +   G+   +YRN    +  +E L++     +++SPGPGTP  +G   + +  L   +P+ G+C+G Q + EA+GG + ++   ++HGK+S + +D +   G+ AG+ NP    RYHS
Sbjct:    4 ILLLDNIDSFTYNLVDQLRSSGHRVVIYRNHIAADNIIERLQQLEQPVLMLSPGPGTPAQAGCMPELLQRLQGQLPMIGICLGHQAIIEAYGGHVGQAG-EILHGKASAIEHDGQ---GMFAGMPNPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_SHIDY (Anthranilate synthase component II (Fragment) OS=Shigella dysenteriae GN=trpG-TRPD PE=4 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 3.877e-19
Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFTYNL   +   G++  +YRN    +  +E L   +   +++SPGPG P ++G   + +  L   +P+ G+C+G Q + EA+GG + ++   ++HGK+S + +D +    + AGL+NP    RYHS
Sbjct:    4 ILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGVPSEAGCMPELLTRLSGKLPIIGICLGHQAIVEAYGGYVGQAG-EILHGKASSIEHDGQ---AMFAGLTNPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_ECOLI (Anthranilate synthase component II OS=Escherichia coli (strain K12) GN=trpD PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.614e-19
Identity = 47/135 (34.81%), Postives = 81/135 (60.00%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFTYNL   +   G++  +YRN    +  +E L   +   +++SPGPG P ++G   + +  L   +P+ G+C+G Q + EA+GG + ++   ++HGK+S + +D +    + AGL+NP    RYHS
Sbjct:    4 ILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERLATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG-EILHGKASSIEHDGQ---AMFAGLTNPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_METTH (Anthranilate synthase component II OS=Methanobacterium thermoautotrophicum GN=trpG PE=4 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGEL------GYHFEVYRNDELTVEELKRKNPRGVLISPGPGTP---QDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFT+NL Q  GE+           V RNDE  + +L+  +P  ++ISPGPG P    D G+ +  + E     PL GVC+G Q +  AFGG++ +     +HGK   V++D  G + L   + NPF A RYHS
Sbjct:    4 ILIIDNYDSFTHNLYQLAGEILRDEGMDEEIMVLRNDEARISDLRALDPEKIIISPGPGNPSRRSDFGVCMDVIGEFTDR-PLLGVCLGHQGIFHAFGGRVDQGE--PVHGKIVEVFHD--GSE-LFRDVPNPFRATRYHS 138          
The following BLAST results are available for this feature:
BLAST of FC868701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TRPG_PYRKO1.424e-2147.41Anthranilate synthase component II OS=Pyrococcus k... [more]
TRPG_HAEIN1.424e-2141.48Anthranilate synthase component II OS=Haemophilus ... [more]
TRPG_SERMA3.172e-2136.30Anthranilate synthase component II OS=Serratia mar... [more]
TRPG1_HALMA7.066e-2140.74Anthranilate synthase component II OS=Haloarcula m... [more]
TRPG_PHACH1.333e-1940.60Anthranilate synthase component 2 OS=Phanerochaete... [more]
TRPG_HALVO1.333e-1938.85Anthranilate synthase component II OS=Halobacteriu... [more]
TRPG_YERPE2.273e-1935.56Anthranilate synthase component II OS=Yersinia pes... [more]
TRPG_SHIDY3.877e-1934.81Anthranilate synthase component II (Fragment) OS=S... [more]
TRPG_ECOLI6.614e-1934.81Anthranilate synthase component II OS=Escherichia ... [more]
TRPG_METTH1.924e-1840.43Anthranilate synthase component II OS=Methanobacte... [more]

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Properties
Property NameValue
Genbank descriptionC31003F10EF AbioticL1 Citrus clementina cDNA clone C31003F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868701 ID=FC868701; Name=FC868701; organism=Citrus clementina; type=EST; length=708bp
TTTTTGTTGTCTTTTCAGTTAAAAGCGCCTTAGTTTCATATTCTCAGTCT
CGCTCTCTCCTCTCTAGCAACAATGGCGGCAATGGTTTCGCAGTCAACTC
TCATTCAAACAAAACCGTCTCTCTCTTTAAAACCCTCTCAACGGTTTCGA
CCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCCAGGGCTGAGGTTGGG
GGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAATGGCTGTGGCAGAGG
CAGTACCCATTTCGAAGTCTTTATATTTGGATGATAAGAAGAGCAAGAAT
AATAAAAATCCCATCATTGTTATTGATAATTATGATAGTTTCACTTACAA
TCTCTGCCAGTATATGGGCGAGCTTGGTTATCACTTTGAGGTTTATCGGA
ATGATGAATTAACTGTGGAGGAGTTAAAACGGAAAAATCCTAGAGGAGTG
CTTATATCCCCTGGGCCAGGCACACCTCAAGATTCTGGAATATCATTGCA
GACTGTTTTGGAACTTGGACCTACTGTGCCTCTGTTTGGTGTTTGTATGG
GTTTGCAGTGCATGGGAGAGGCTTTTGGAGGGAAGATTGTGCGTTCTCCT
CTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTATTATGATGAGAAAGG
GGAGGATGGCTTGCTTGCTGGACTATCAAATCCTTTCACAGCAGGTAGAT
ATCATAGC
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