FC868701

Overview
NameFC868701
Unique NameFC868701
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length708
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14547 contig Ccv1_Contig14547:16..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_CRYNV (Anthranilate synthase component 2 OS=Cryptococcus neoformans var. grubii GN=TRP1 PE=4 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.779e-17
Identity = 52/136 (38.24%), Postives = 83/136 (61.03%), Query Frame = 1
Query:  316 IVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRG----VLISPGPGTPQ-DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++IDNYDSFT+N+   +  +G +  V RND++T++E++     G    ++ISPGPG P+ DSG+S   +      +P+ GVCMGL+C+ +  GG+I  +   + HGK+SLV +D     G+   L    ++ RYHS
Sbjct:    5 LLIDNYDSFTWNIYADLASVGGNPFVVRNDKITLKEIEGMFADGELERIVISPGPGHPRTDSGVSRDVIAWGMGKLPILGVCMGLECIVDLLGGEIAYAG-EIKHGKTSLVQHD---SIGVFHNLPQFLSSTRYHS 136          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_LACLA (Anthranilate synthase component II OS=Lactococcus lactis subsp. lactis GN=trpG PE=4 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I++IDNYDSFTYNL QY+G L     V +ND+ ++  +  K    ++ SPGPG P D+G     + +     P+ G+C+G Q + E FGGK+ R    VMHGK+S V   +   + +   L + F   RYHS
Sbjct:    2 ILIIDNYDSFTYNLVQYVGVLT-DVAVVKNDDDSLGNMAEKAD-ALIFSPGPGWPADAGKMETLIQQFAGQKPILGICLGFQAIVEVFGGKL-RLAHQVMHGKNSQV--RQTSGNLIFNHLPSKFLVMRYHS 128          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_BUCAP (Anthranilate synthase component 2 OS=Buchnera aphidicola subsp. Schizaphis graminum GN=trpG PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 45/135 (33.33%), Postives = 77/135 (57.04%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN+DSFTYNL + +     +  +YRN       +  +K+     +++SPGP TP+++G  L  + ++   +P+ G+C+G Q + EA+GG I+     + HGK+SL+ +D      +  GL  P    RYHS
Sbjct:    4 ILLLDNFDSFTYNLVEQLRNKNSNVLIYRNTVDINTILNSIKKIRNPILMLSPGPSTPKNAGCMLNLIKKVKGEIPIVGICLGHQAIVEAYGG-IIGYAGEIFHGKASLINHDGL---EMFEGLPQPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_CORGL (Anthranilate synthase component 2 OS=Corynebacterium glutamicum GN=trpG PE=4 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.525e-15
Identity = 49/145 (33.79%), Postives = 74/145 (51.03%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKS-SLVYYDEKGEDGLLAGLS------------NPFTAGRYHS 708
            +++IDN+DSF YNL       GY   V+RN  + VE +   NP  + +SPGPG P D+G  +  +      +PL G+C+G Q + E  GGK+   P G +HG + +++  D   +  + AGL+                 GRYHS
Sbjct:    4 VVLIDNHDSFVYNLVDAFAVAGYKCTVFRNT-VPVETILAANPDLICLSPGPGYPADAGNMMALIERTLGQIPLLGICLGYQALIEYHGGKV--EPCGPVHGTTDNMILTDAGVQSPVFAGLATDVEPDHPEIPGRKVPIGRYHS 145          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_BUCAI (Anthranilate synthase component 2 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=trpG PE=4 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.601e-15
Identity = 45/135 (33.33%), Postives = 75/135 (55.56%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRND---ELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++DN DSFTYNL + +     +  VYRN    ++    LK+     +++SPGP  P+ +G  L  + ++   +P+ G+C+G Q + EA+GG I+     + HGK+SL+ +D      +  G+  P    RYHS
Sbjct:    4 ILLLDNIDSFTYNLVEQLRNQKNNVLVYRNTVSIDIIFNSLKKLTHPILMLSPGPSLPKHAGCMLDLIKKVKGDIPIVGICLGHQAIVEAYGG-IIGYAGEIFHGKASLIRHDGL---EMFEGVPQPLPVARYHS 134          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPE_RHIME (Anthranilate synthase OS=Rhizobium meliloti GN=trpE(G) PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 49/132 (37.12%), Postives = 68/132 (51.52%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I+++D+ DSF + L  Y  + G      R   +  E   R  P  V++SPGPGTP+D              +P+FGVC+GLQ + EA+GG + R     MHGK S +   E G   + +GL    T GRYHS
Sbjct:  531 ILLVDHEDSFVHTLANYFRQTGASVTTVRTP-VAEEIFDRVKPDLVVLSPGPGTPKDFDCKATIKKARARDLPIFGVCLGLQALAEAYGGDL-RQLAIPMHGKPSRIRVLEPGI--VFSGLGKEVTVGRYHS 658          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PABS_STRGR (Para-aminobenzoate synthase OS=Streptomyces griseus GN=pab PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.875e-14
Identity = 53/135 (39.26%), Postives = 71/135 (52.59%), Query Frame = 1
Query:  316 IVIDNYDSFTYNLCQYMGEL-GYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQ---DSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +++DNYDSFTYNL  Y+    G   EV RND+             V++SPGPGTP    D G+  +   E    +P+ GVC+G Q M  A G ++ R+P    HG++S V +D     GL  GL  P    RYHS
Sbjct:    4 LLVDNYDSFTYNLFHYLSRANGREPEVIRNDDPAWRPGLLDAFDNVVLSPGPGTPHRPADFGLCARIAEE--GRLPVLGVCLGHQGMALAHGARVGRAP-EPRHGRTSAVRHD---GTGLFEGLPQPLEVVRYHS 132          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPG_COCHE (Anthranilate synthase component 2 OS=Cochliobolus heterostrophus GN=TRP1 PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 46/132 (34.85%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            +I+IDNYDSFT+N+ QY+   G    VYRNDE+T++EL  K P  ++IS  P T ++        L        F  C    C+  ++GG +  +   ++HGK+  + +D K   G+ AG+       RYHS
Sbjct:   26 VILIDNYDSFTWNVYQYLVFEGAFVTVYRNDEITLDELIAKKPTQLVISQVPDTRKEDVALAIEPLRTSVAKSPFSACAWESCIFYSYGGTVDVTG-QILHGKTCPLKHDGK---GVFAGVPQDVPVTRYHS 153          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: TRPE_AZOBR (Anthranilate synthase OS=Azospirillum brasilense GN=trpE(G) PE=4 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDELTVEELKRKNPRGVLISPGPGTPQDSGIS--LQTVLELGPTVPLFGVCMGLQCMGEAFGGKIVRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            ++++D+ DSF + L  Y+ + G      R+       L  + P  V++SPGPG P D  ++  +   L LG  +P+FGVC+GLQ M E FGG +   P  V HGK++ V         L AGL    T GRYHS
Sbjct:  534 VLLVDHDDSFVHTLADYLRQTGASVTTLRHSHARAA-LAERRPDLVVLSPGPGRPADFDVAGTIDAALALG--LPVFGVCLGLQGMVERFGGALDVLPEPV-HGKATEV---RVLGGALFAGLPERLTVGRYHS 660          
BLAST of FC868701 vs. ExPASy Swiss-Prot
Match: PHNB_PSEAE (Anthranilate synthase component II, pyocyanin specific OS=Pseudomonas aeruginosa GN=phnB PE=4 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 50/137 (36.50%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  313 IIVIDNYDSFTYNLCQYMGELGYHFEVYRNDEL--TVEE-LKRKNPRGVLISPGPGTPQDSGISLQTVLELGPTVPLFGVCMGLQCMGEAFGGKI--VRSPLGVMHGKSSLVYYDEKGEDGLLAGLSNPFTAGRYHS 708
            I ++DN+DSFTYNL +    LG    V RND    T++  L       +++SPGPG P+D+G  L+ +      +P+ GVC+G Q +  A GG +   R PL   HGKS+ + +D++    L  G+++     RYHS
Sbjct:    3 ITLLDNFDSFTYNLVEQFCLLGAEVRVMRNDTPLPTIQAALLADGCELLVLSPGPGRPEDAGCMLELLAWARGRLPVLGVCLGHQALALAAGGAVGEARKPL---HGKSTSLRFDQR--HPLFDGIAD-LRVARYHS 133          
The following BLAST results are available for this feature:
BLAST of FC868701 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
TRPG_CRYNV2.779e-1738.24Anthranilate synthase component 2 OS=Cryptococcus ... [more]
TRPG_LACLA1.056e-1639.39Anthranilate synthase component II OS=Lactococcus ... [more]
TRPG_BUCAP1.801e-1633.33Anthranilate synthase component 2 OS=Buchnera aphi... [more]
TRPG_CORGL1.525e-1533.79Anthranilate synthase component 2 OS=Corynebacteri... [more]
TRPG_BUCAI2.601e-1533.33Anthranilate synthase component 2 OS=Buchnera aphi... [more]
TRPE_RHIME4.436e-1537.12Anthranilate synthase OS=Rhizobium meliloti GN=trp... [more]
PABS_STRGR2.875e-1439.26Para-aminobenzoate synthase OS=Streptomyces griseu... [more]
TRPG_COCHE1.864e-1334.85Anthranilate synthase component 2 OS=Cochliobolus ... [more]
TRPE_AZOBR1.864e-1337.31Anthranilate synthase OS=Azospirillum brasilense G... [more]
PHNB_PSEAE2.434e-1336.50Anthranilate synthase component II, pyocyanin spec... [more]

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Properties
Property NameValue
Genbank descriptionC31003F10EF AbioticL1 Citrus clementina cDNA clone C31003F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868701 ID=FC868701; Name=FC868701; organism=Citrus clementina; type=EST; length=708bp
TTTTTGTTGTCTTTTCAGTTAAAAGCGCCTTAGTTTCATATTCTCAGTCT
CGCTCTCTCCTCTCTAGCAACAATGGCGGCAATGGTTTCGCAGTCAACTC
TCATTCAAACAAAACCGTCTCTCTCTTTAAAACCCTCTCAACGGTTTCGA
CCCAATCGTCTCTCTGCAATCCCTGAGCCTTCTCCAGGGCTGAGGTTGGG
GGCTAAGAAGGGAAATGGGGCTGTAAAGTTGTCAATGGCTGTGGCAGAGG
CAGTACCCATTTCGAAGTCTTTATATTTGGATGATAAGAAGAGCAAGAAT
AATAAAAATCCCATCATTGTTATTGATAATTATGATAGTTTCACTTACAA
TCTCTGCCAGTATATGGGCGAGCTTGGTTATCACTTTGAGGTTTATCGGA
ATGATGAATTAACTGTGGAGGAGTTAAAACGGAAAAATCCTAGAGGAGTG
CTTATATCCCCTGGGCCAGGCACACCTCAAGATTCTGGAATATCATTGCA
GACTGTTTTGGAACTTGGACCTACTGTGCCTCTGTTTGGTGTTTGTATGG
GTTTGCAGTGCATGGGAGAGGCTTTTGGAGGGAAGATTGTGCGTTCTCCT
CTTGGTGTCATGCATGGAAAAAGTTCTCTTGTGTATTATGATGAGAAAGG
GGAGGATGGCTTGCTTGCTGGACTATCAAATCCTTTCACAGCAGGTAGAT
ATCATAGC
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