FC868702

Overview
NameFC868702
Unique NameFC868702
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22
Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K  F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NP VT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGN-SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 2.729e-22
Identity = 64/163 (39.26%), Postives = 84/163 (51.53%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K  F+RAV+AEF+A            +G+K     N    Q      + ++ AFG  I  L      ISG H+NP VT GL L  ++S+ RAL+Y++AQC+GAI     +     S       G N+LADG N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMTLFVFISIGSALGFKYPVGNNQTAVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLPGN-SLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 1.769e-21
Identity = 61/163 (37.42%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E+ K  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NP VT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N+LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 102.064 bits (253), Expect = 3.017e-21
Identity = 61/163 (37.42%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E+ K  F+RAV+AEF+A            +G+    + N    Q      + ++ AFG  I  L      ISG H+NP VT GL L  ++S++RA++Y++AQC+GAI     +     S       G N+LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EIKKKLFWRAVVAEFLAMTLFVFISIGSALGFNYPLERNQTLVQDN----VKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 161          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.940e-21
Identity = 63/164 (38.41%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K  F+RAV+AEF+A            +G+     P  N    G     + ++ AFG  I  L      ISG H+NP VT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G NELA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFVFISIGSALGFNY---PVRNNQTAGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.497e-20
Identity = 63/164 (38.41%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K  F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NP VT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 98.9821 bits (245), Expect = 2.554e-20
Identity = 63/164 (38.41%), Postives = 85/164 (51.83%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K  F+RAV+AEF+A            +G+      N  T   G V   + ++ AFG  I  L      ISG H+NP VT GL L  ++S++RA++Y++AQC+GAI     +     S  +    G N LA G N G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTT---GAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.431e-20
Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K +F+RAVIAEF+A            +G+    +   N        I+ ++ AFG  I  +      +SG H+NP VT G  L  ++S+++A++Y++AQCLGA+     +        N    G N L+ G + G GLG EI+ TF LV  V + TD +R
Sbjct:    4 EFKKKAFWRAVIAEFLAMILFVFISIGAALGFNFPIEEKANQTVGRSQDIVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGITSGLENN-SLGLNGLSPGVSAGQGLGVEILVTFQLVLCVVAVTDRRR 165          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 9.705e-20
Identity = 61/164 (37.20%), Postives = 84/164 (51.22%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGV-GILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKR 677
            E  K  F+RAV+AEF+A            +G++    P  N    G     + ++ AFG  I  L      ISG H+NP VT GL L  ++S++RA++Y++AQC+GAI     +     S       G N LA G + G GLG EIIGT  LV  V + TD +R
Sbjct:    4 EFKKKIFWRAVVAEFLAMTLFIFISIGSALGFQY---PVRNNQTSGAAQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSSLPGN-SLGLNSLAPGVDSGQGLGIEIIGTLQLVLCVLATTDRRR 163          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.186e-17
Identity = 58/170 (34.12%), Postives = 89/170 (52.35%), Query Frame = 3
Query:  174 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680
            ++ F+ +   +F++AV AEF+A            I +    +P         V ++ I+  FG  I  +V C   ISGGHINP VT  +   RK+S+ +++ Y+ AQCLGAI G G +  +  +  N  GG G   +      G GL  E+I TF LV+T+F++ D KR+
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPNVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 186          
The following BLAST results are available for this feature:
BLAST of FC868702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
AQP1_HUMAN2.089e-2239.26Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_PONAB2.729e-2239.26Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_MOUSE1.769e-2137.42Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_RAT3.017e-2137.42Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_CANFA3.940e-2138.41Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.497e-2038.41Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP2.554e-2038.41Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQPA_RANES7.431e-2033.74Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]
AQP1_PIG9.705e-2037.20Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP4_NOTAL1.186e-1734.12Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC31003F11EF AbioticL1 Citrus clementina cDNA clone C31003F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868702 ID=FC868702; Name=FC868702; organism=Citrus clementina; type=EST; length=692bp
ATCATTAAACTCTGTAGTCACACAACAGTCGTAGCTCTTGTTTCTCCCTC
TCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGT
TGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACT
ACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAG
TGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTT
TCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATC
CCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCT
TGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTAT
TTCTGGTGGACATATCAACCCGACTGTGACATTCGGACTGTTCTTGGGGC
GCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTG
GGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTA
CAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGG
GCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACT
GTTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCC
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