FC868702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.549e-17 Identity = 64/171 (37.43%), Postives = 89/171 (52.05%), Query Frame = 3 Query: 186 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG----LGAEIIGTFVLVYTVF-SATDPKRSA 683 EE+ + RA +AEFI+ I + TD T G+ +A AFG +F+ V A ISGGH+NP VTFG+ LG ++L+R +LY +AQ LG++ C F+ +F GG A G + G G L EI+ TF LVYTV+ +A DPK + Sbjct: 13 EEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPS--GLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC-FLLSFAT-------GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS 171
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 57/170 (33.53%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 174 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINP VT + RK+S+ +++ Y++AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR+ Sbjct: 23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 57/170 (33.53%), Postives = 90/170 (52.94%), Query Frame = 3 Query: 174 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680 ++ F+ + +F++AV AEF+A I + + +P V ++ I+ FG I +V C ISGGHINP VT + RK+S+ +++ Y+ AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR+ Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 57/170 (33.53%), Postives = 89/170 (52.35%), Query Frame = 3 Query: 174 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680 ++ F+ + +F++AV AEF+A I + +P V ++ I+ FG I +V C ISGGHINP VT + RK+S+ +++ Y+ AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR+ Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 54/156 (34.62%), Postives = 81/156 (51.92%), Query Frame = 3 Query: 213 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 677 +A +AEFI+ I Y T+ T G++ + A +F+ V A ISGGH+NP VTFG F+G ++L+R ++Y++AQ LG+I + S +G L++G G L EI+ TF LVYTV+ +A DPK+ Sbjct: 21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK 167
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 57/170 (33.53%), Postives = 88/170 (51.76%), Query Frame = 3 Query: 174 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINP VT + RK+S+ +++ Y+ AQCLGAI G G + + + + GG G + G GL E+I TF LV+T+F++ D KR+ Sbjct: 23 MVAFKGVWTQAFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 213 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 677 +A +AEFI+ + + TD T G++ + A +F+ V A ISGGH+NP VTFG F+G +SL++A++Y VAQ LG++ C +K GG GA L+ G + EI+ TF LVYTV+ +A DPK+ Sbjct: 21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPS----GLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK 168
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 56/159 (35.22%), Postives = 82/159 (51.57%), Query Frame = 3 Query: 213 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKR 677 +A +AEFI+ + + TD T G++ + A +F+ V A ISGGH+NP VTFG F+G +SL++AL+Y VAQ LG++ C +K GG GA L+ G + E++ TF LVYTV+ +A DPK+ Sbjct: 21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATP----AGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKI-------ATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK 168
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.713e-16 Identity = 56/170 (32.94%), Postives = 89/170 (52.35%), Query Frame = 3 Query: 174 LIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680 ++ F+ + +F++AV AEF+A I + P V ++ I+ FG I +V C ISGGHINP VT + R++S+ +++ Y+ AQCLGAI G G + + + + GG G + + G GL E+I TF LV+T+F++ D KR+ Sbjct: 23 MVAFKGVWTQTFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKPL-------PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGIL--YLVTPPSVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = 3 Query: 183 FEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGY-KSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGA---NELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 683 F++ + RA +AEFI+ I Y K +D L+T G++ IA G +F+ V A ISGGH+NP VTFGL +G ++++I + Y +AQ LG+ C +K GG A + +A G G+ EII TF LVYTV+ +A DPK+ + Sbjct: 9 FDDSFSLASLRAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTP-----GLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVT-------GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGS 168 The following BLAST results are available for this feature:
BLAST of FC868702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868702 ID=FC868702; Name=FC868702; organism=Citrus clementina; type=EST; length=692bpback to top |