FC868702

Overview
NameFC868702
Unique NameFC868702
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14
Identity = 56/166 (33.73%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 686
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NP VTF   +G ++SL+RA+ YMVAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 53/161 (32.92%), Postives = 78/161 (48.45%), Query Frame = 3
Query:  204 SFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 683
            S  +A ++EFIA            + +   T            G++ IA A    +F+ V   A ISGGH+NP VT GL +G  ++LI    Y +AQCLG+I  C  +  F     N      + ++ G     G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGA----LDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVF---VTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS 168          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP22_MAIZE (Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 57/161 (35.40%), Postives = 78/161 (48.45%), Query Frame = 3
Query:  213 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 683
            +A +AEFIA            I +   T    N       G++ IA A    +F+ V   A  SGGH+NP VTFGL +G  ++++  L Y VAQ LGA   C    FV   +    +   GG  EL        G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAFGQLT----NGGALDPAGLVAIAVAHALALFVGVSVAANTSGGHLNPAVTFGLAVGGHITVLTGLFYWVAQLLGASVACLLLRFVTHGKAIPTHGVSGGTTEL-------EGVVFEIVITFALVYTVYATAADPKKGS 168          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: MIP_CANFA (Lens fiber major intrinsic protein OS=Canis familiaris GN=MIP PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 55/166 (33.13%), Postives = 76/166 (45.78%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 686
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NP VTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWTP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: MIP_SHEEP (Lens fiber major intrinsic protein OS=Ovis aries GN=MIP PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 55/166 (33.13%), Postives = 78/166 (46.99%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 686
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NP VTF   +G ++SL+RA+ Y+VAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: TIP22_ARATH (Probable aquaporin TIP2-2 OS=Arabidopsis thaliana GN=TIP2-2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.357e-13
Identity = 53/159 (33.33%), Postives = 81/159 (50.94%), Query Frame = 3
Query:  213 RAVIAEFIAXXXXXXXXXXXXIGY-KSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSA 683
            +A ++EFIA            + + K  +D  L+       G++ +A A    +F+ V   A ISGGH+NP VT GL +G  +++I    Y +AQCLG+I  C  +  F     N      + +A G     G+  EI+ TF LVYTV+ +A DPK+ +
Sbjct:   19 KAYLSEFIATLLFVFAGVGSALAFAKLTSDAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITVITGFFYWIAQCLGSIVAC-LLLVF---VTNGESVPTHGVAAGLGAIEGVVMEIVVTFALVYTVYATAADPKKGS 168          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQPZ_PSEPK (Aquaporin Z OS=Pseudomonas putida (strain KT2440) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.773e-13
Identity = 41/126 (32.54%), Postives = 65/126 (51.59%), Query Frame = 3
Query:  327 GVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFV-------KAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSA 683
            G+G+LG+A+AFG  +  + +    ISG H+NP V+FGL +G +      L Y++AQ +GAI   G +         F+ S      G A+    GY  G G  +E++ T + +  +  ATD +  A
Sbjct:   34 GIGVLGVAFAFGLTVLTMAFAIGHISGCHLNPAVSFGLVVGGRFPAKELLPYVIAQVIGAILAAGVIYLIASGKAGFELSAGLASNGYADHSPGGYTLGAGFVSEVVMTAMFLVVIMGATDARAPA 159          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13
Identity = 51/166 (30.72%), Postives = 74/166 (44.58%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 686
            E   +SF+RAV AEF              + + +           G   +L IA AFG ++  +V     +SG HINP VTF   +G ++SL RA+ Y+ AQ LGA+ G   +     +   R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFGLGASLKWAA-----------GPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAI-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGR 156          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 3
Query:  345 IAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRS 680
            IA+ FG ++  L      +SG HINP VT GL +   VS+++   Y+V+QC+GAI G   +KA   S     GG G   +A G + G G+  E + TF+LV+ V    D +R+
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRT 167          
BLAST of FC868702 vs. ExPASy Swiss-Prot
Match: MIP_RAT (Lens fiber major intrinsic protein (Fragment) OS=Rattus norvegicus GN=Mip PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.950e-13
Identity = 54/166 (32.53%), Postives = 76/166 (45.78%), Query Frame = 3
Query:  189 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPTVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSAR 686
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NP VTF   +G ++SL+RA  Y+ AQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R
Sbjct:    1 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVALAFGLALATLVQTVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYIAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVGQATTVEIFLTLQFVLCIFATYDERRNGR 154          
The following BLAST results are available for this feature:
BLAST of FC868702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
MIP_BOVIN3.572e-1433.73Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIP23_ARATH4.665e-1432.92Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP22_MAIZE6.093e-1435.40Aquaporin TIP2-2 OS=Zea mays GN=TIP2-2 PE=2 SV=1[more]
MIP_CANFA6.093e-1433.13Lens fiber major intrinsic protein OS=Canis famili... [more]
MIP_SHEEP7.958e-1433.13Lens fiber major intrinsic protein OS=Ovis aries G... [more]
TIP22_ARATH1.357e-1333.33Probable aquaporin TIP2-2 OS=Arabidopsis thaliana ... [more]
AQPZ_PSEPK1.773e-1332.54Aquaporin Z OS=Pseudomonas putida (strain KT2440) ... [more]
MIP_RANPI2.315e-1330.72Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP_ANOGA3.024e-1338.05Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
MIP_RAT3.950e-1332.53Lens fiber major intrinsic protein (Fragment) OS=R... [more]

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Properties
Property NameValue
Genbank descriptionC31003F11EF AbioticL1 Citrus clementina cDNA clone C31003F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868702 ID=FC868702; Name=FC868702; organism=Citrus clementina; type=EST; length=692bp
ATCATTAAACTCTGTAGTCACACAACAGTCGTAGCTCTTGTTTCTCCCTC
TCGTTTAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGT
TGAAGTTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACT
ACCACGACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAG
TGGTCTTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTT
TCTTTATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATC
CCAACTTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCT
TGGGCCTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTAT
TTCTGGTGGACATATCAACCCGACTGTGACATTCGGACTGTTCTTGGGGC
GCAAGGTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTG
GGTGCAATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTA
CAACAGGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGG
GCACCGGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACT
GTTTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCC
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