FC868713

Overview
NameFC868713
Unique NameFC868713
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9454 contig Ccv1_Contig9454:241..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: XYLD_RHIME (Putative D-xylulose reductase OS=Rhizobium meliloti GN=R02526 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.260e-37
Identity = 75/143 (52.45%), Postives = 98/143 (68.53%), Query Frame = 1
Query:  226 LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP 654
            L P DVL+ ++ VG+CGSDVHY    +   FVV EPM++GHE AGV+ +VGS+V+ L  GDRV +EPGI        K G YN+ P ++F+ATPPVHG L  +VVHPA   ++LPD+VS  EGAM EP ++G+ A  RA I P
Sbjct:   24 LSPTDVLIGIRTVGVCGSDVHYYTHGKIGPFVVNEPMILGHEAAGVVLEVGSQVRHLKKGDRVCMEPGIPDLSSRSSKLGIYNVDPSVRFWATPPVHGCLTPEVVHPAAFTYRLPDHVSFAEGAMVEPFAIGVQAALRAGIRP 166          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: DHSO_BOMMO (Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.576e-37
Identity = 74/162 (45.68%), Postives = 104/162 (64.20%), Query Frame = 1
Query:  163 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 648
            N AA L G N ++I+   +P +   +VL+++  VGICGSDV    T  C   V+ +P+VIGHE AG + KVG +V +L  GDRVA+EP   C  C+ CK G+YNLC E ++ ++    G+L     H AD C KLPDN+++EEGA  +PL++ +HAC RA I
Sbjct:    4 NYAAVLHGANDVRIEKIPVPEINDDEVLIKIDCVGICGSDVKLYSTGTCGADVIDKPIVIGHEGAGTVVKVGDKVSSLRVGDRVAIEPTQPCRSCELCKRGKYNLCVEPRYCSSMGAPGNLCRYYKHVADFCHKLPDNLTMEEGAAVQPLAIVIHACNRAKI 165          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: XYLD_AGRT5 (Putative D-xylulose reductase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=Atu4318 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.499e-36
Identity = 77/159 (48.43%), Postives = 100/159 (62.89%), Query Frame = 1
Query:  196 LKIQPFELPS------LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP 654
            L ++ F++P       LGP DV +R   VGICGSDVHY    +   FVV  PMV+GHE +G + + GS+V  L  GDRV +EPGI        K G YN+ P ++F+ATPP+HG L  +V+HPA   +KLPDNVS  EGAM EP ++G+ A  RA I P
Sbjct:   12 LSLRDFDIPGGAGSGELGPKDVRIRTHTVGICGSDVHYYTHGKIGHFVVNAPMVLGHEASGTVIETGSDVTHLKIGDRVCMEPGIPDPTSRASKLGIYNVDPAVRFWATPPIHGCLTPEVIHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAALRARIQP 170          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: XYLD_MORMO (D-xylulose reductase OS=Morganella morganii PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.264e-36
Identity = 74/143 (51.75%), Postives = 94/143 (65.73%), Query Frame = 1
Query:  226 LGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP 654
            LG  DV +++  VGICGSDVHY +  R   FVV EPMV+GHE +GVI   G  VK L  GDRV +EPGI   +    + G YNL P ++F+ATPP+ G L   V+HPA   FKLPDNVS  +GAM EPL++G+ +  +A I P
Sbjct:   25 LGDDDVEIKIHTVGICGSDVHYYQHGRIGPFVVDEPMVLGHEASGVITAAGKNVKHLKVGDRVCMEPGIPDLQSPQSRAGIYNLDPAVRFWATPPIDGCLRESVIHPAAFTFKLPDNVSFAQGAMVEPLAIGMQSATKAGIKP 167          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: XYLD_RHILO (Putative D-xylulose reductase OS=Rhizobium loti GN=mlr4915 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.115e-35
Identity = 74/154 (48.05%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  196 LKIQPFELP-SLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP 654
            L ++   LP  +GP DV + +  VG+CGSDVHY        +VV+ PMV+GHE AG + + G+ V+T   GDRV +EPG+        K G YN+ P++ F+ATPPVHG LA   VHPA   +KLPDNVS  EGAM EP ++G+ A  RA I P
Sbjct:   12 LSLREIALPLDVGPDDVKIAIHTVGVCGSDVHYYTHGAIGSYVVRAPMVLGHEAAGTVVETGANVETFKAGDRVCMEPGVPNLSSRATKLGIYNVDPDVSFWATPPVHGVLAPYAVHPAAFTYKLPDNVSFAEGAMVEPFAIGMQAASRARIVP 165          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: XYL2_YEAST (D-xylulose reductase OS=Saccharomyces cerevisiae GN=XYL2 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.115e-35
Identity = 75/151 (49.67%), Postives = 98/151 (64.90%), Query Frame = 1
Query:  232 PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLSWEQG 684
            P +V++++KA GICGSD+HY    R A++VV+ PMV+GHE +G++  +G  VKTL  GDRVALEPGI        K GRYNL P +KF ATPP  G+L        D  +KLPD+VS EEGA+ EPLSV +HA + A I     C+ +  G
Sbjct:   31 PNEVIIQIKATGICGSDIHYYTHGRIANYVVESPMVLGHESSGIVALIGENVKTLKVGDRVALEPGIPDRFSPEMKEGRYNLDPNLKFAATPPFDGTLTKYYKTMKDFVYKLPDDVSFEEGALIEPLSVAIHANKLAKIKFGARCVVFGAG 181          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: DHSO1_YEAST (Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=SOR1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.791e-34
Identity = 73/163 (44.79%), Postives = 102/163 (62.58%), Query Frame = 1
Query:  163 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 648
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+HY ++     +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K GRYNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EPLSVG+H+ + A +
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGRYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGV 168          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: DHSO2_YEAST (Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=SOR2 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34
Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 1
Query:  163 NMAAWLMGVNTLKIQPFELPSL-GPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 648
            N A  L  V  + I+   +P++  P+ V + +KA GICGSD+HY ++     +++K PMV+GHE +G + +VG  V  +  GDRVA+EPG+     D  K G YNLCP M F ATPP+ G+L    + P D   KLP+ VS EEGA  EPLSVG+H+ + A +
Sbjct:    6 NPAVVLEKVGDIAIEQRPIPTIKDPHYVKLAIKATGICGSDIHYYRSGGIGKYILKAPMVLGHESSGQVVEVGDAVTRVKVGDRVAIEPGVPSRYSDETKEGSYNLCPHMAFAATPPIDGTLVKYYLSPEDFLVKLPEGVSYEEGACVEPLSVGVHSNKLAGV 168          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: YDJJ_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein ydjJ OS=Escherichia coli (strain K12) GN=ydjJ PE=3 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32
Identity = 72/169 (42.60%), Postives = 104/169 (61.54%), Query Frame = 1
Query:  163 NMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVV-KEP---MVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPP-VHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGP 654
            N  A L    T+KI   E+P     +VL++++ VGICGSDVH  ++     F+  K+P   + +GHECAG +  VGS V+   PGDRV +EPG+ C  C +C  G+YN+CP++ F AT P   G+L + + HP    +KLPDN+   EGA+ EP +VG+HA   A++ P
Sbjct:    3 NSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFES---GPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKP 168          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: XYL2_PICST (D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32
Identity = 74/170 (43.53%), Postives = 101/170 (59.41%), Query Frame = 1
Query:  163 NMAAWLMGVNTLKIQPFELPSLG-PYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH-------GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 648
            N +  L  ++ +  + ++ P +  P DVLV++K  GICGSD+H+    R  +FV+ +PMV+GHE AG + +VG  V +L  GD VA+EPGI     D  K G YNLCP M F ATP          G+L      P D   KLPD+VSLE GA+ EPLSVG+HA +  ++
Sbjct:    4 NPSLVLNKIDDISFETYDAPEISEPTDVLVQVKKTGICGSDIHFYAHGRIGNFVLTKPMVLGHESAGTVVQVGKGVTSLKVGDNVAIEPGIPSRFSDEYKSGHYNLCPHMAFAATPNSKEGEPNPPGTLCKYFKSPEDFLVKLPDHVSLELGALVEPLSVGVHASKLGSV 173          
The following BLAST results are available for this feature:
BLAST of FC868713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
XYLD_RHIME2.260e-3752.45Putative D-xylulose reductase OS=Rhizobium melilot... [more]
DHSO_BOMMO6.576e-3745.68Sorbitol dehydrogenase OS=Bombyx mori GN=SDH PE=2 ... [more]
XYLD_AGRT52.499e-3648.43Putative D-xylulose reductase OS=Agrobacterium tum... [more]
XYLD_MORMO3.264e-3651.75D-xylulose reductase OS=Morganella morganii PE=1 S... [more]
XYLD_RHILO2.115e-3548.05Putative D-xylulose reductase OS=Rhizobium loti GN... [more]
XYL2_YEAST2.115e-3549.67D-xylulose reductase OS=Saccharomyces cerevisiae G... [more]
DHSO1_YEAST1.791e-3444.79Sorbitol dehydrogenase 1 OS=Saccharomyces cerevisi... [more]
DHSO2_YEAST8.887e-3444.17Sorbitol dehydrogenase 2 OS=Saccharomyces cerevisi... [more]
YDJJ_ECOLI1.676e-3242.60Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
XYL2_PICST2.859e-3243.53D-xylulose reductase OS=Pichia stipitis GN=XYL2 PE... [more]

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Properties
Property NameValue
Genbank descriptionC31003H02EF AbioticL1 Citrus clementina cDNA clone C31003H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868713 ID=FC868713; Name=FC868713; organism=Citrus clementina; type=EST; length=685bp
GAATCAAATCATATCCCTCATCCAGAATCAGAATAAATGGTAGCTTAAAA
TGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTGTTTTTGAAGGGT
AAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGAGAAAAGAAGGAT
GGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAA
GATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATGATGTTTTAGTCA
GGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCATTATCTCAAGACC
TTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGTGATTGGGCACGA
GTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGC
CCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGCTGGCGATGCGAT
CACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGATGAAATTTTTTGC
AACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGGTGCATCCTGCAG
ACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGGAAGGGGCTATG
TGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGTGCCAATATCGG
TCCTGAGACAATGTGCTTATCATGGGAGCAGGGCC
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