FC868713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_FRATN (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. novicida (strain U112) GN=tdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 +P G DVL+++K ICG+D+H + + + PM+ GHE AG + G V ++ GDRV+ E + C +C +C+ G+ +LC + V G+ A +V PA FK+PD++S + + +P+ +H N+ E + ++ Sbjct: 21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIGV-NVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGEDVLIT 171
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_FRATM (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=tdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 +P G DVL+++K ICG+D+H + + + PM+ GHE AG + G V ++ GDRV+ E + C +C +C+ G+ +LC + V G+ A +V PA FK+PD++S + + +P+ +H N+ E + ++ Sbjct: 21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIGV-NVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGEDVLIT 171
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_FRATH (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=tdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 +P G DVL+++K ICG+D+H + + + PM+ GHE AG + G V ++ GDRV+ E + C +C +C+ G+ +LC + V G+ A +V PA FK+PD++S + + +P+ +H N+ E + ++ Sbjct: 21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIGV-NVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGEDVLIT 171
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_FRATF (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=tdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 +P G DVL+++K ICG+D+H + + + PM+ GHE AG + G V ++ GDRV+ E + C +C +C+ G+ +LC + V G+ A +V PA FK+PD++S + + +P+ +H N+ E + ++ Sbjct: 21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIGV-NVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGEDVLIT 171
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_FRAT1 (L-threonine 3-dehydrogenase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=tdh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.872e-17 Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1 Query: 217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 +P G DVL+++K ICG+D+H + + + PM+ GHE AG + G V ++ GDRV+ E + C +C +C+ G+ +LC + V G+ A +V PA FK+PD++S + + +P+ +H N+ E + ++ Sbjct: 21 IPEYGYNDVLIKIKKTAICGTDLHIYNWDKWSQNTIPVPMITGHEFAGEVVAKGDGVTSVDIGDRVSGEGHLVCGQCRNCRAGKRHLCRKTIGIGV-NVQGAFAEYLVMPAVNVFKIPDSISDDIASTFDPMGNAIHTALSFNLTGEDVLIT 171
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURXL (L-threonine 3-dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=tdh PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 50/159 (31.45%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 196 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 L + + P +G DV++R+ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A +V PA FK+P +S + A+ +P H N+ E + ++ Sbjct: 13 LTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURPP (L-threonine 3-dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=tdh PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.289e-16 Identity = 50/159 (31.45%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 196 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 L + + P +G DV++R+ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A +V PA FK+P +S + A+ +P H N+ E + ++ Sbjct: 13 LTLTDVKKPEVGHNDVMIRITRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLVIPAFNAFKIPPEISDDLAAIFDPFGNATHTALSFNLVGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_XANC5 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=tdh PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 50/172 (29.07%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 157 EVNMAAWLMGVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 E N WL V +P+ GP +VL++++ ICG+D+H + ++ + IGHE G + ++GS V G RV+ E I C C +C+GGR +LCP V+G+ A +V PA + +PD + E A +P H ++ E + ++ Sbjct: 8 EANKGIWLEQV--------PVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIRPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGV-NVNGAFAEYMVMPASNLWLIPDQIPSELAAFFDPYGNAAHCALEFDVIGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_SOLUE (L-threonine 3-dehydrogenase OS=Solibacter usitatus (strain Ellin6076) GN=tdh PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 50/137 (36.50%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH 627 P++G DVL+R+ GICG+DVH K A + PM IGHE G IE VGS V PGD V+ E + C RC +C GR +LC + M P G+ A + P ++ + + L+ A+ +P +H Sbjct: 21 PAIGINDVLIRVLRTGICGTDVHIYKWDEWARETIHVPMAIGHEFVGRIEAVGSNVADFFPGDIVSGEGHVVCGRCRNCFAGRRHLCAKTMGVGVNRP--GAFAEYIALPMTNIWRHHEGIDLDVAAIFDPFGNAVH 155
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: RSPB_ECOLI (Starvation-sensing protein rspB OS=Escherichia coli (strain K12) GN=rspB PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 54/145 (37.24%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 190 NTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSV 618 N L I E+P+ +V V++K GICGSD H R + K P VIGHE GVI+ VG V++ G+RVA++P +SC C C G+ N+C + A VH G + V PA +K+P+ V+ + M EP ++ Sbjct: 10 NQLAIVEREIPTPSAGEVRVKVKLAGICGSDSHIY---RGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTL---AVLGVHADGGFSEYAVVPAKNAWKIPEAVADQYAVMIEPFTI 148 The following BLAST results are available for this feature:
BLAST of FC868713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 234
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868713 ID=FC868713; Name=FC868713; organism=Citrus clementina; type=EST; length=685bpback to top |