FC868713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURCH (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=tdh PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 P +G DVL++++ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A + PA FK+P +S + ++ +P H N+ E + ++ Sbjct: 21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURCC (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=tdh PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 P +G DVL++++ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A + PA FK+P +S + ++ +P H N+ E + ++ Sbjct: 21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURCA (L-threonine 3-dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=tdh PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16 Identity = 47/151 (31.13%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 P +G DVL++++ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A + PA FK+P +S + ++ +P H N+ E + ++ Sbjct: 21 PEVGHNDVLIKIRRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_XANCP (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris GN=tdh PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 45/157 (28.66%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 202 IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 ++ +P+ GP +VL++++ ICG+D+H + + + IGHE G + ++GS V G RV+ E I C C +C+GGR +LCP V+G+ A +V PA + +PD + E A +P H ++ E + ++ Sbjct: 15 LEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_XANCB (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain B100) GN=tdh PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 45/157 (28.66%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 202 IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 ++ +P+ GP +VL++++ ICG+D+H + + + IGHE G + ++GS V G RV+ E I C C +C+GGR +LCP V+G+ A +V PA + +PD + E A +P H ++ E + ++ Sbjct: 15 LEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_XANC8 (L-threonine 3-dehydrogenase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=tdh PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 45/157 (28.66%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 202 IQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 ++ +P+ GP +VL++++ ICG+D+H + + + IGHE G + ++GS V G RV+ E I C C +C+GGR +LCP V+G+ A +V PA + +PD + E A +P H ++ E + ++ Sbjct: 15 LEQVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTITPGLTIGHEFVGRVAELGSAVTGYQVGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGV-NVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFDVIGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_AGRRK (L-threonine 3-dehydrogenase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=tdh PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 48/138 (34.78%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH 627 +P +GP DVL+R++ ICG+DVH + A + PMV+GHE G I ++GS V G+RV+ E I C +C +C+ GR +LC + P GS V P +PD++ E A+ +P +H Sbjct: 24 VPEVGPNDVLIRVRKSAICGTDVHIWNWDQWAQKTIPVPMVVGHEFCGEIAEIGSAVTKYHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFGEFVCIPESNVVPIPDDIPDEVAAIFDPFGNAVH 159
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_SHEFN (L-threonine 3-dehydrogenase OS=Shewanella frigidimarina (strain NCIMB 400) GN=tdh PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH 627 P +G D+L++++ ICG+DVH + + PM+ GHE G + VG EV+ GDRV+ E I+C C +C+ GR +LC G+ A +V PA FK+P ++ + A+ +P +H Sbjct: 21 PEMGHNDLLIKIRKTAICGTDVHIYNWDEWSQKTIPVPMIAGHEYVGEVVDVGQEVRGFSIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNR-DGAFAEYLVLPAFNAFKIPADIPDDLAAIFDPFGNAVH 155
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURCM (L-threonine 3-dehydrogenase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=tdh PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 P +G DVL+++ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A + PA FK+P +S + ++ +P H N+ E + ++ Sbjct: 21 PEVGHNDVLIKIHRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGEDVLIT 170
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_BURA4 (L-threonine 3-dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=tdh PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15 Identity = 47/151 (31.13%), Postives = 75/151 (49.67%), Query Frame = 1 Query: 220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672 P +G DVL+++ ICG+D+H K A + PM +GHE G I ++G EV+ GDRV+ E I+C C +C+ GR +LC G+ A + PA FK+P +S + ++ +P H N+ E + ++ Sbjct: 21 PEVGHNDVLIKIHRTAICGTDIHIWKWDDWAQKTIPVPMHVGHEYVGEIVEMGQEVRGFAIGDRVSGEGHITCGFCRNCRAGRRHLCRNTVGVGVNR-EGAFAEYLAIPAFNAFKIPPEISDDLASIFDPFGNATHTALSFNLVGEDVLIT 170 The following BLAST results are available for this feature:
BLAST of FC868713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 234
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868713 ID=FC868713; Name=FC868713; organism=Citrus clementina; type=EST; length=685bpback to top |