FC868713

Overview
NameFC868713
Unique NameFC868713
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length685
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9454 contig Ccv1_Contig9454:241..926. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: GATD_ECOLI (Galactitol-1-phosphate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=gatD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 1
Query:  238 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA 630
            +V V++ + G+CGSD+  +       +    P+ +GHE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  A  +V      F LP ++ +E+GA  EP++VGLHA
Sbjct:   27 EVRVKIASSGLCGSDLPRIFKNGAHYY----PITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHA 152          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: GATD_ECO57 (Galactitol-1-phosphate 5-dehydrogenase OS=Escherichia coli O157:H7 GN=gatD PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 1
Query:  238 DVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHA 630
            +V V++ + G+CGSD+  +       +    P+ +GHE +G I+ VGS V  L PGD VA  P + C+ C  C  G Y+ C +  F  +    G  A  +V      F LP ++ +E+GA  EP++VGLHA
Sbjct:   27 EVRVKIASSGLCGSDLPRIFKNGAHYY----PITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHA 152          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: DHSO_BACHD (Sorbitol dehydrogenase OS=Bacillus halodurans GN=gutB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 51/156 (32.69%), Postives = 73/156 (46.79%), Query Frame = 1
Query:  184 GVNTLKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGIS-CWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 648
            G     +Q    P+ G + V +++K  G+CGSD+H  +      + V  P+ +GHE +G I ++G  V     GDRV  E   S C +C +C  G YNLC   K        GS A  V+   +    LP  V     AM EPL+   HA  + +I
Sbjct:   10 GTGHFAVQEKPEPTPGKHQVKIKVKYTGVCGSDIHTYE----GHYPVAAPVTLGHEFSGEIVELGEGVTGFNVGDRVTSETTYSICGKCSYCTSGDYNLCSHRKGLGNQQ-DGSFAKYVIARQESLHHLPAGVDDRSAAMTEPLACTHHAIAKTSI 160          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: BDHA_BACSU ((R,R)-butanediol dehydrogenase OS=Bacillus subtilis GN=bdhA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.425e-15
Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  196 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE----------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANI 648
            ++I+  E P   P  V +++K  GICGSD+H  + L    F+  +          P+ +GHE +G + +VG  V+    GDRV +EP  +     H   G YNL  +M F       G  +  V    +L FKLPD +S E+GA+ EP +V L+A R + +
Sbjct:   12 IRIEHIEEPKTEPGKVKIKVKWCGICGSDLH--EYLGGPIFIPVDKPHPLTNETAPVTMGHEFSGEVVEVGEGVENYKVGDRVVVEPIFAT----HGHQGAYNLDEQMGFLGLAGGGGGFSEYVSVDEELLFKLPDELSYEQGALVEPSAVALYAVRSSKL 166          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_RHIME (L-threonine 3-dehydrogenase OS=Rhizobium meliloti GN=tdh PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 49/138 (35.51%), Postives = 73/138 (52.90%), Query Frame = 1
Query:  217 LPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPE-MKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLH 627
            +P +GP DVL+R++   ICG+DVH     + A+  +  PMV+GHE  G + +VG  V     G+RV+ E  I C +C +C+ GR +LC   +      P  GS A  V  P      +PD+V  E  A+ +P    +H
Sbjct:   24 VPEIGPNDVLIRVRKSAICGTDVHIWNWDQWAEKTIPVPMVVGHEFMGEVVEVGPAVSKHHVGERVSGEGHIVCGKCRNCRAGRGHLCRNTLGVGVNRP--GSFAEFVCLPEYNVVSIPDDVPDEIAAIFDPFGNAVH 159          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15
Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 1
Query:  196 LKIQPFELPSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWRCDHCKGGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPDNVSLEEGA 597
            L+++  E P +   +VLVR+KA G+C +D+H        D+ VK   P++ GHE  GVIE+VG  V  L  GDRV + P +  +C  CD+C  G+  LC E +  A   V G  A      AD   K+PDN+S EE A
Sbjct:   13 LQVKEVEKPKISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLC-ERQQNAGYSVDGGYAEYCRAAADYVVKIPDNLSFEEAA 144          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_COXBU (L-threonine 3-dehydrogenase OS=Coxiella burnetii GN=tdh PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672
            P  G  +VL+++K   ICG+D+H  K    A   +  PM +GHE  G I +VG     L  GDRV+ E  I+C  C +C+ G+ +LC   ++     V+  G+ A  +V PA   +K+P  +S +  A+ +P     H+    ++  E + ++
Sbjct:   21 PKPGRDEVLIKIKKTAICGTDLHIYKWDEWAQKTIPVPMHVGHEFVGEIVEVGEAASALAVGDRVSGEGHITCGDCRNCRAGKRHLC---RYTVGVGVNRPGAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGEDVLIT 170          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_COXBR (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672
            P  G  +VL+++K   ICG+D+H  K    A   +  PM +GHE  G I +VG     L  GDRV+ E  I+C  C +C+ G+ +LC   ++     V+  G+ A  +V PA   +K+P  +S +  A+ +P     H+    ++  E + ++
Sbjct:   21 PKPGRDEVLIKIKKTAICGTDLHIYKWDEWAQKTIPVPMHVGHEFVGEIVEVGEAASALAVGDRVSGEGHITCGDCRNCRAGKRHLC---RYTVGVGVNRPGAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGEDVLIT 170          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_COXBN (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672
            P  G  +VL+++K   ICG+D+H  K    A   +  PM +GHE  G I +VG     L  GDRV+ E  I+C  C +C+ G+ +LC   ++     V+  G+ A  +V PA   +K+P  +S +  A+ +P     H+    ++  E + ++
Sbjct:   21 PKPGRDEVLIKIKKTAICGTDLHIYKWDEWAQKTIPVPMHVGHEFVGEIVEVGEAASALAVGDRVSGEGHITCGDCRNCRAGKRHLC---RYTVGVGVNRPGAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGEDVLIT 170          
BLAST of FC868713 vs. ExPASy Swiss-Prot
Match: TDH_COXB2 (L-threonine 3-dehydrogenase OS=Coxiella burnetii (strain CbuG_Q212) GN=tdh PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15
Identity = 47/153 (30.72%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  220 PSLGPYDVLVRMKAVGICGSDVHYLKTLRCADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWRCDHCKGGRYNLCPEMKFFATPPVH--GSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGLHACRRANIGPETMCLS 672
            P  G  +VL+++K   ICG+D+H  K    A   +  PM +GHE  G I +VG     L  GDRV+ E  I+C  C +C+ G+ +LC   ++     V+  G+ A  +V PA   +K+P  +S +  A+ +P     H+    ++  E + ++
Sbjct:   21 PKPGRDEVLIKIKKTAICGTDLHIYKWDEWAQKTIPVPMHVGHEFVGEIVEVGEAASALAVGDRVSGEGHITCGDCRNCRAGKRHLC---RYTVGVGVNRPGAFAEYLVIPAKNAYKIPAKISDDIAAILDPFGNAAHSALEFDLVGEDVLIT 170          
The following BLAST results are available for this feature:
BLAST of FC868713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 234
Match NameE-valueIdentityDescription
GATD_ECOLI1.425e-1535.88Galactitol-1-phosphate 5-dehydrogenase OS=Escheric... [more]
GATD_ECO571.425e-1535.88Galactitol-1-phosphate 5-dehydrogenase OS=Escheric... [more]
DHSO_BACHD1.425e-1532.69Sorbitol dehydrogenase OS=Bacillus halodurans GN=g... [more]
BDHA_BACSU1.425e-1533.54(R,R)-butanediol dehydrogenase OS=Bacillus subtili... [more]
TDH_RHIME1.862e-1535.51L-threonine 3-dehydrogenase OS=Rhizobium meliloti ... [more]
ADH1_BACST1.862e-1539.86Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
TDH_COXBU3.176e-1530.72L-threonine 3-dehydrogenase OS=Coxiella burnetii G... [more]
TDH_COXBR3.176e-1530.72L-threonine 3-dehydrogenase OS=Coxiella burnetii (... [more]
TDH_COXBN3.176e-1530.72L-threonine 3-dehydrogenase OS=Coxiella burnetii (... [more]
TDH_COXB23.176e-1530.72L-threonine 3-dehydrogenase OS=Coxiella burnetii (... [more]

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Properties
Property NameValue
Genbank descriptionC31003H02EF AbioticL1 Citrus clementina cDNA clone C31003H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868713 ID=FC868713; Name=FC868713; organism=Citrus clementina; type=EST; length=685bp
GAATCAAATCATATCCCTCATCCAGAATCAGAATAAATGGTAGCTTAAAA
TGTTGTGTACAGAGTGAAGTCTCTTCTGTGCACTTGTGTTTTTGAAGGGT
AAAAAGCAAATATGGGCAAAGGAGGGATGTCACAAGGAGAAAAGAAGGAT
GGAGAAGAAGTTAACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAA
GATTCAACCTTTTGAGCTTCCTTCTCTGGGACCATATGATGTTTTAGTCA
GGATGAAAGCCGTTGGTATTTGTGGAAGTGATGTGCATTATCTCAAGACC
TTGAGGTGTGCCGATTTTGTTGTGAAAGAGCCTATGGTGATTGGGCACGA
GTGTGCTGGGGTCATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGC
CCGGTGACCGTGTGGCCCTGGAACCCGGGATCAGCTGCTGGCGATGCGAT
CACTGCAAAGGAGGTCGATACAATTTGTGTCCAGAGATGAAATTTTTTGC
AACTCCGCCCGTTCATGGTTCCCTGGCTAATCAGGTGGTGCATCCTGCAG
ACCTATGTTTTAAGCTGCCGGACAATGTGAGCCTGGAGGAAGGGGCTATG
TGTGAGCCCTTGAGTGTTGGTCTTCATGCCTGCCGCCGTGCCAATATCGG
TCCTGAGACAATGTGCTTATCATGGGAGCAGGGCC
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