FC868714

Overview
NameFC868714
Unique NameFC868714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: BDH1_YEAST ((R,R)-butanediol dehydrogenase OS=Saccharomyces cerevisiae GN=BDH1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21
Identity = 62/204 (30.39%), Postives = 104/204 (50.98%), Query Frame = 2
Query:  176 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKE-----------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC-----WQ---------CDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            +V++ +   G+CGSD+H  + L    F+ K+           P+ +GHE +G++ KVG +V  +  GD V ++   SC     W          CD C+ G  NLC  +  +G   + G  A QVV        +P  + L+  A+ EPLSV  HA + +     ++ L++G+GPIGL T+L  +  GA +IV+ ++ + R+ +
Sbjct:   28 EVIIDVSWCGICGSDLH--EYLDGPIFMPKDGECHKLSNAALPLAMGHEMSGIVSKVGPKVTKVKVGDHVVVDAASSCADLHCWPHSKFYNSKPCDACQRGSENLCTHAGFVGLGVISGGFAEQVVVSQHHIIPVPKEIPLDVAALVEPLSVTWHAVKISGFKKGSSALVLGAGPIGLCTILVLKGMGASKIVVSEIAERRIEM 229          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: IDND_ECOLI (L-idonate 5-dehydrogenase OS=Escherichia coli (strain K12) GN=idnD PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 60/181 (33.15%), Postives = 87/181 (48.07%), Query Frame = 2
Query:  182 LVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGS----PPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            LV++   G+CGSD+H+ +  ++ +F++K PMV+GHE  G +  + S+   L  G  VA+ P   C  C YC     N C + +  GS    P V G      +     C   P     +  A  EPL+V +HA  +A       V I G GPIG + + A +  GA  IV  DV    LS+
Sbjct:   31 LVQITRGGICGSDLHYYQEGKVGNFMIKAPMVLGHEVIGKV--IHSDSSELHEGQTVAINPSKPCGHCKYCIEHNENQCTDMRFFGSAMYFPHVDGGFTRYKMVETSQCVPYPAKADEKVMAFAEPLAVAIHAAHQAGELQGKRVFISGVGPIGCLIVSAVKTLGAAEIVCADVSPRSLSL 209          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH3_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.418e-21
Identity = 74/198 (37.37%), Postives = 103/198 (52.02%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            LKI+ +E P++   +VLVR+KA GVC +D+H        D+ VK   P++ GHE  G++E+VG  V  L  GDRV + P +  +C  CDYC  G+  LC   K  G   V G  A      AD   K+PDN+S EE A      V  + A +     P   V I G G +G V +  A+A G   +V VD+ D +L +
Sbjct:   13 LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLEL 203          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: TDH_THETN (L-threonine 3-dehydrogenase OS=Thermoanaerobacter tengcongensis GN=tdh PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 57/184 (30.98%), Postives = 95/184 (51.63%), Query Frame = 2
Query:  152 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYR 703
            E+P +GP +VL+++KA  +CG+DVH       A   +K P  +GHE  G + ++G  V ++  GD V+ E  I C +C  C+ G  ++C  +  LG     G  A  +  P    +    N+ LE  ++ EPL   VH     ++  + +V ++G GPIG++ +   +  GA  I  ++  DYR
Sbjct:   23 EIPKIGPDEVLIKVKATSICGTDVHIYVWNEWAKSRIKPPKTMGHEFVGEVVEIGENVTSVKVGDLVSAETHIVCGKCRACRTGNAHICENTLILG-VDTDGAFAEYIKVPESNVWINDKNIPLEILSIQEPLGNAVHTVFSGDVVGK-SVAVIGCGPIGMMAIPLLKRTGAAAIFAIEPADYR 204          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adhT PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 3.492e-20
Identity = 73/198 (36.87%), Postives = 102/198 (51.52%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVH-ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            L+++ +E P +   +VLVR+KA GVC +D+H        D+ VK   P++ GHE  GVIE+VG  V  L  GDRV + P +  +C  CDYC  G+  LC   +  G   V G  A      AD   K+PDN+S EE A      V  + A +     P   V I G G +G V +  A+A G   +V VD+ D +L +
Sbjct:   13 LQVKEVEKPKISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGVIEEVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCERQQNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDLGDEKLEL 203          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: BDH2_YEAST (Probable (R,R)-butanediol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=BDH2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.561e-20
Identity = 66/196 (33.67%), Postives = 97/196 (49.49%), Query Frame = 2
Query:  164 LGPYDVLVRMKAVGVCGSDVHFLKTLRL---ADFVVKE------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISC-----WQ---------CDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            + P ++++ ++  G+CG+D+H      +    D    E      P  +GHE AG + +VG  VK L  GD+V +EP  +C     W          C  CK G YN+C      G+    G  A +VV     C+K+PD V L+  A+ +PL+V  HA R       +  LI+G+GPIGL T+LA  A G   IV+
Sbjct:   24 VAPDELVIDIEWCGICGTDLHEYTDGPIFFPEDGHTHEISHNPLPQAMGHEMAGTVLEVGPGVKNLKVGDKVVVEPTGTCRDRYRWPLSPNVDKEWCAACKKGYYNICSYLGLCGAGVQSGGFAERVVMNESHCYKVPDFVPLDVAALIQPLAVCWHAIRVCEFKAGSTALIIGAGPIGLGTILALNAAGCKDIVV 219          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: BDHA_BACSU ((R,R)-butanediol dehydrogenase OS=Bacillus subtilis GN=bdhA PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.733e-19
Identity = 64/200 (32.00%), Postives = 102/200 (51.00%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE----------PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYR 703
            ++I+ +E P   P  V +++K  G+CGSD+H  + L    F+  +          P+ +GHE +G + +VG  V+    GDRV +EP  +     +   G YNL  +   LG     G  +  V    +L FKLPD +S E+GA+ EP +V ++A R + +       + G GPIGL+ + A +A GA  I  V++   R
Sbjct:   12 IRIEHIEEPKTEPGKVKIKVKWCGICGSDLH--EYLGGPIFIPVDKPHPLTNETAPVTMGHEFSGEVVEVGEGVENYKVGDRVVVEPIFAT----HGHQGAYNLDEQMGFLGLAGGGGGFSEYVSVDEELLFKLPDELSYEQGALVEPSAVALYAVRSSKLKAGDKAAVFGCGPIGLLVIEALKAAGATDIYAVELSPER 205          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: YPHC_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yphC OS=Escherichia coli (strain K12) GN=yphC PE=3 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.043e-19
Identity = 67/213 (31.46%), Postives = 106/213 (49.77%), Query Frame = 2
Query:  104 MAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFL-----KTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCP-ESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV----HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            +AA+L G +T+ ++ + +P+ G   VL++MK+ G+CGSDVH++      T    D  + +  + GHE  G I  +G   +    GDRV +     C  C  C+ G    C  E K        G  A  ++        LPD +S E+GA    +S GV        R  +    NVL++G GP+G++ M+ A+  GA RI+ VD+   RL++
Sbjct:    5 LAAYLPGNSTVDLREVAVPTPGINQVLIKMKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDRVLVYHISGCGFCPNCRRGFPISCTGEGKAAYGWQRDGGHAEYLLAEEKDLILLPDALSYEDGAF---ISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDMLPERLAM 214          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH2_BACST (Alcohol dehydrogenase OS=Bacillus stearothermophilus GN=adh PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.281e-18
Identity = 65/194 (33.51%), Postives = 102/194 (52.58%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKE--PMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDD 697
            L+I+ +E P L   +VLV+++A GVC +D+H        D+ +K   P++ GHE  G++ +V   VK++  GDRV + P +  +C +C+YC  G+  LCP     G   V G  A     PAD   K+PDN+   E A  +C  ++    A + +   P   V I G G +G + +  A+A G   +V VD+ D
Sbjct:   13 LEIKEVERPKLEEGEVLVKIEACGVCHTDLHAAH----GDWPIKPKLPLIPGHEGVGIVVEVAKGVKSIKVGDRVGI-PWLYSACGECEYCLTGQETLCPHQLN-GGYSVDGGYAEYCKAPADYVAKIPDNLDPVEVAPILCAGVTT-YKALKVSGARPGEWVAIYGIGGLGHIALQYAKAMGL-NVVAVDISD 198          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: DHSO_PIG (Sorbitol dehydrogenase (Fragment) OS=Sus scrofa GN=SORD PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 9.510e-18
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 2
Query:  101 NMAAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPG 367
            N++  + G   L+++   +P  GP  VL++M +VG+CGSDVH+ +  R+ +FVVK+PMV+GHE +G   KVGS V  L PGDR A EPG
Sbjct:    8 NLSLVVHGPGDLRLENYPIPEPGPNXVLLKMHSVGICGSDVHYWQHGRIGNFVVKKPMVLGHEASGTXVKVGSLVTHLKPGDRXAXEPG 96          
The following BLAST results are available for this feature:
BLAST of FC868714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
BDH1_YEAST1.418e-2130.39(R,R)-butanediol dehydrogenase OS=Saccharomyces ce... [more]
IDND_ECOLI2.418e-2133.15L-idonate 5-dehydrogenase OS=Escherichia coli (str... [more]
ADH3_BACST2.418e-2137.37Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
TDH_THETN9.190e-2130.98L-threonine 3-dehydrogenase OS=Thermoanaerobacter ... [more]
ADH1_BACST3.492e-2036.87Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
BDH2_YEAST4.561e-2033.67Probable (R,R)-butanediol dehydrogenase 2 OS=Sacch... [more]
BDHA_BACSU1.733e-1932.00(R,R)-butanediol dehydrogenase OS=Bacillus subtili... [more]
YPHC_ECOLI5.043e-1931.46Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
ADH2_BACST7.281e-1833.51Alcohol dehydrogenase OS=Bacillus stearothermophil... [more]
DHSO_PIG9.510e-1848.31Sorbitol dehydrogenase (Fragment) OS=Sus scrofa GN... [more]

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Properties
Property NameValue
Genbank descriptionC31003H04EF AbioticL1 Citrus clementina cDNA clone C31003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868714 ID=FC868714; Name=FC868714; organism=Citrus clementina; type=EST; length=712bp
AGTGAAGTCTCTGCTGCGCACTTGTGTTTTTGAAGAGTGAAAAGCAAATA
TGGGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTT
AACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTT
GGAGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCG
TTGGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCC
GATTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGT
CATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTG
TGGCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGA
GGTCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGT
TCATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTA
AGCTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTG
AGTGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAA
TGTGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGCAG
CTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTAT
CGTTTATCTGTT
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