FC868714

Overview
NameFC868714
Unique NameFC868714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: YHG1_SCHPO (Zinc-type alcohol dehydrogenase-like protein C1198.01 OS=Schizosaccharomyces pombe GN=SPBC1198.01 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.242e-17
Identity = 74/251 (29.48%), Postives = 114/251 (45.42%), Query Frame = 2
Query:   50 MGKGGMSQGE---KEDGEEVNMAAWLM-GVNTLKIQPLELPSLG-PYDVLVRMKAVGVC-GSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---------------------SKGLGSPPVHGCLANQVVHP-ADL-CFKLPDNVSLEEGA-MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            +G   +S+G    K D     M A +  G   +KI  +  P++  P DV+V+  A  +C GSD H           +++  ++GHE  G++ + G EV  L  GDRV +   ++C QC +CK   Y  C                       +K LG  P  GC A  +  P A++ C KLPD++   EG  M + L   +HAC    +     V I G GPIGL     A+  GA +++ ++V   R+ +
Sbjct:   16 LGHREVSEGSTQPKPDPSGATMKACVWDGPLNVKIAEVPKPTITHPKDVIVKTTACTICSGSDSHIFSGEMPG---IEKGAILGHESCGIVAEKGDEVNNLEIGDRVVIAFDLACGQCSFCKRHEYAACDTTNDSKLMDVNYGSHHSAIFGYTKLLGDVP--GCQAEYIRVPFAEINCCKLPDDIPDSEGLFMSDVLCTSLHACTLGEVKKGDTVAIWGMGPIGLYAGRWAQILGASKVIGIEVVPERIEL 261          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_RALEU (Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.164e-17
Identity = 66/222 (29.73%), Postives = 100/222 (45.05%), Query Frame = 2
Query:  107 AAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRV------------ALEPGISCWQCDYCKGGRYNLCPESKGLGS----PPVHGCLANQVVHP---ADLCFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            AA  +    +++    +P +GP D LVR+    +CG+DVH LK     ++ V + + +GHE  G+IEK+GS V     G RV            A + G++     Y        C   K          + G  A  V+ P   A+L   +PD ++ E+  MC + +S G      ANI     V +   GPIGL     AR  GA  I+ +D +D+RL +
Sbjct:    7 AAVFVEPGRIELADKPIPDIGPNDALVRITTTTICGTDVHILK----GEYPVAKGLTVGHEPVGIIEKLGSAVTGYREGQRVIAGAICPNFNSYAAQDGVASQDGSYLMASGQCGCHGYKATAGWRFGNMIDGTQAEYVLVPDAQANLT-PIPDGLTDEQVLMCPDIMSTGFKGAENANIRIGHTVAVFAQGPIGLCATAGARLCGATTIIAIDGNDHRLEI 223          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_SULTO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus tokodaii GN=adh PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 64/198 (32.32%), Postives = 100/198 (50.51%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRL 706
            LK++ + +P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V+ P     +KL    ++E   +         A R+A++ P   ++++G+ G +G + +  A+A     I+ VDV +  L
Sbjct:   13 LKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEAL 209          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_SULSR (NAD-dependent alcohol dehydrogenase OS=Sulfolobus sp. (strain RC3) GN=adh PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.051e-17
Identity = 62/193 (32.12%), Postives = 100/193 (51.81%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV 691
            L ++ +++P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE++G EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V++P     +KL    ++E   +         A R+A++ P   ++++G+ G +G + +  A+A G   I+ VDV
Sbjct:   13 LVLKDIDIPKPKGAQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEMGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVLNPHYKYMYKLRRLNAVEASPLTCSGITTYRAVRKASLDPTKTLVVVGAGGGLGTMAVQIAKAVGGATIIGVDV 204          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_SULSO (NAD-dependent alcohol dehydrogenase OS=Sulfolobus solfataricus GN=adh PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.373e-16
Identity = 64/193 (33.16%), Postives = 97/193 (50.26%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLK----TLRLA-DFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDV 691
            L +Q + +P      VL++++A GVC SDVH  +     LR+  D  VK P+ +GHE AG IE+VG EV     GD VA+ P      C YC+ G  +LC   + LG     G  A  V+ P     +KL    ++E   +         A R+A++ P   +L++G+ G +G + +  A+A     I+ VDV
Sbjct:   13 LSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDV 204          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-16
Identity = 61/214 (28.50%), Postives = 98/214 (45.79%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---------SKGLGSPPVHGCLANQVVHPADL----CFKLPDNVSLEEGAMCEPLSV---------GVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 709
            L I+ +E+      +V ++M A GVCG+D+  L T  L+ F    PM++GHE  G++E VG  V ++  GD+V L     C +C  C   + N+C E         S+G       G L +Q +           K      ++EGA  E + +         G  A   A + P +   + G G +GL  ++  +A GA RI+ VD++  R +
Sbjct:   22 LAIEEIEVAPPKAKEVRIKMVATGVCGTDIKHLDTQELSKFC---PMIMGHEGVGIVESVGEGVSSVRTGDKVILLCIPQCGECKTCLNSKNNICTEIRLSKTHLASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGA-AINSAKVTPGSTCAVFGLGGVGLSVIIGCKAAGAARIIAVDINKDRFA 231          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_STAAW (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=adh PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 709
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_STAAS (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=adh PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 709
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_STAAR (Alcohol dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=adh PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 709
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_STAAN (Alcohol dehydrogenase OS=Staphylococcus aureus (strain N315) GN=adh PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.342e-16
Identity = 61/196 (31.12%), Postives = 102/196 (52.04%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 709
            + I+  +L +L P + LV+ +  GVC +D+H    ++ ADF     + +GHE  G + +V  +V++L  GDRV++     SC +C+YC  GR  LC   K  G   V G +A QV+  AD   K+P+   L+  A       GV    A + +N+ P   + + G G +G + +  A+     +IV  D++D +L+
Sbjct:   12 VSIEDKKLRALKPGEALVQTEYCGVCHTDLH----VKNADFGDVTGVTLGHEGIGKVIEVAEDVESLKIGDRVSIAWMFESCGRCEYCTTGRETLCRSVKNAGY-TVDGAMAEQVIVTADYAVKVPE--KLDPAAASSITCAGVTTYKAVKVSNVKPGQWLGVFGIGGLGNLALQYAKNVMGAKIVAFDINDDKLA 200          
The following BLAST results are available for this feature:
BLAST of FC868714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
YHG1_SCHPO1.242e-1729.48Zinc-type alcohol dehydrogenase-like protein C1198... [more]
ADH_RALEU6.164e-1729.73Alcohol dehydrogenase OS=Ralstonia eutropha GN=adh... [more]
ADH_SULTO8.051e-1732.32NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_SULSR8.051e-1732.12NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH_SULSO1.373e-1633.16NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADH6_RAT1.793e-1628.50Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
ADH_STAAW2.342e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAS2.342e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAR2.342e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]
ADH_STAAN2.342e-1631.12Alcohol dehydrogenase OS=Staphylococcus aureus (st... [more]

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Properties
Property NameValue
Genbank descriptionC31003H04EF AbioticL1 Citrus clementina cDNA clone C31003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868714 ID=FC868714; Name=FC868714; organism=Citrus clementina; type=EST; length=712bp
AGTGAAGTCTCTGCTGCGCACTTGTGTTTTTGAAGAGTGAAAAGCAAATA
TGGGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTT
AACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTT
GGAGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCG
TTGGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCC
GATTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGT
CATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTG
TGGCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGA
GGTCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGT
TCATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTA
AGCTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTG
AGTGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAA
TGTGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGCAG
CTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTAT
CGTTTATCTGTT
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