FC868714

Overview
NameFC868714
Unique NameFC868714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_SCHPO (Alcohol dehydrogenase OS=Schizosaccharomyces pombe GN=adh1 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 2
Query:  122 GVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVV--KEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD 697
            G   +K + + +   G  +VLV +K  GVC +D+H L+     D+ +  K P++ GHE AGV+ KVG+ V  L  GDRV ++    SC  C+YC      +CP  + L    V G   +  +  A     +P++V LE  A  MC  ++    A + + +GP   + I G+ G +G + +  A+A  A R+V +D  D
Sbjct:   17 GPENVKFEEVPVAEPGQDEVLVNIKYTGVCHTDLHALQ----GDWPLPAKMPLIGGHEGAGVVVKVGAGVTRLKIGDRVGVKWMNSSCGNCEYCMKAEETICPHIQ-LSGYTVDGTFQHYCIANATHATIIPESVPLEVAAPIMCAGITC-YRALKESKVGPGEWICIPGAGGGLGHLAVQYAKAM-AMRVVAIDTGD 207          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1B_UROHA (Alcohol dehydrogenase 1B OS=Uromastyx hardwickii PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.983e-15
Identity = 60/207 (28.99%), Postives = 97/207 (46.86%), Query Frame = 2
Query:  140 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESK-----GL-----------GSPPVH----GCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            I  +E+     ++V +++ A G+C SD H L      +F    P+++GHE AGV+E VG  V ++ PGD+V       C +C+ C+  R N+C +S+     GL           G P  H    G      V P D   K+  +  LE+  +     S G  A    A + P +   + G G +GL  ++  +A GA RI+ +D++
Sbjct:   23 IVEIEVAPPKAHEVRIKILASGICRSDDHVLSGALKVNF----PIILGHEAAGVVESVGEGVTSMKPGDKVIPIFLPQCGECNSCRHPRGNVCKKSELGPFTGLLYDGTSRFTYQGKPVYHFVRTGTFTEYTVAPEDSVVKIDASAPLEKVCLIGCGFSTGYGAAINSAKVQPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDIN 225          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_THEBR (NADP-dependent alcohol dehydrogenase OS=Thermoanaerobacter brockii GN=adh PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.382e-15
Identity = 58/186 (31.18%), Postives = 92/186 (49.46%), Query Frame = 2
Query:  152 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQV------VHPADL-CFKLPDNVSLEEGAMC-EPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIV 685
            E P+ GP+D +VR  AV  C SD+H +    + +   +  M++GHE  G + +VGSEVK   PGDRV +      W+    + G +     S G+ +      + + V      V+ AD+    LP  + LE   M  + ++ G H    A+I     V ++G GP+GL+ +  A+  GA RI+ V
Sbjct:   18 EKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQ---HSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRIIAV 197          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: DOIAD_STRLV (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces lividus GN=livE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.418e-15
Identity = 59/171 (34.50%), Postives = 80/171 (46.78%), Query Frame = 2
Query:  152 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFG 664
            +LP   P + LVR+    VCGSD+ F K +         P+V GHE +G +  V      LV  D V  +   SC  C +C  G+  LC + + LG      C A  +  PA    +LP   SL      EPL+V ++A  R  + P   V I G+G IGL+  LA R  G
Sbjct:   18 DLPEPAPGEALVRLAYNSVCGSDLSFYKGVWHGSTY---PVVPGHEWSGTVVDVNGADSGLVGVDVVG-DLTCSCGTCRHCAEGKPTLCGDLQELGFTRDGAC-AEYMTIPAANLHRLPPGTSLRAACQVEPLAVALNAVDRLAVVPGEKVAITGAGGIGLLLALAVRQRG 183          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_CLOBE (NADP-dependent alcohol dehydrogenase OS=Clostridium beijerinckii GN=adh PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15
Identity = 61/196 (31.12%), Postives = 97/196 (49.49%), Query Frame = 2
Query:  116 LMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQV------VHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIV 679
            ++G+N L     E P  G YD +VR  AV  C SD+H +    L D   ++ M++GHE  G + +VGSEVK   PGDRV +      W+    + G       S G+ +        + V      V+ AD+    LP ++ LE   M  + ++ G H    A+I   ++V+++G G +GL+ +  A+  GA RI+
Sbjct:    6 MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGD---RKNMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAG---FQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH7_RAT (Alcohol dehydrogenase class 4 mu/sigma chain OS=Rattus norvegicus GN=Adh7 PE=1 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.769e-15
Identity = 61/218 (27.98%), Postives = 99/218 (45.41%), Query Frame = 2
Query:  107 AAWLMGVNT-LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPES----KGL-----------GSPPVH----GCLANQVVHPADLCFKLPDNVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            AA L G N    I+ +E+      +V V++ A G+CG+D H +K   ++ F    P+++GHE  G++E VG EV T+ PGD+V       C +C+ C+    NLC  S    +G+           G P  H           V       K+      E+  +     S G  A  + A + P +   + G G +GL  ++  +A GA RI+ +D++
Sbjct:   12 AAVLWGTNQPFSIEDIEVAPPKAKEVRVKILATGICGTDDHVIKGTMVSKF----PVIVGHEAVGIVESVGEEVTTVRPGDKVIPLFLPQCRECNPCRNPEGNLCIRSDLTGRGVLADGTTRFTCKGKPVQHFMNTSTFTEYTVLDESSVAKIDAEAPPEKACLIGCGFSTGYGAAVKTAKVSPGSTCAVFGLGGVGLSVVMGCKAAGASRIIGIDIN 225          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_SULAC (NAD-dependent alcohol dehydrogenase OS=Sulfolobus acidocaldarius GN=adh PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.535e-15
Identity = 60/199 (30.15%), Postives = 99/199 (49.75%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTL---RLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHP-ADLCFKLPD-NVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDDYRLSV 712
            L+++ +++P +G   VLV++   GVC +D+         R++      P+VIGHE AG + ++G  V+     D+V ++P I    C YCK G    C   K LG   V+G     V+ P     FKL + + S      C  ++    A R AN+ P  +V+I+G+ G +G + +  A+A     I+ VDV +  L +
Sbjct:   13 LRLEDMDVPKVGVGQVLVKVDYAGVCHTDLSVRSGAIFNRISSSKPTLPLVIGHEIAGEVVELGGNVEGFKKSDKVLIDPWIGDGSCHYCKIGEDQYCDNPKWLGI-NVNGGYGEYVLVPDYRYMFKLRNLSTSTASPLACSGVT-AYRALRLANLDPSKSVMIIGAGGGLGSIAVQIAKAIHGSFIIGVDVSEEGLKL 209          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHA_BACSU (Probable formaldehyde dehydrogenase adhA OS=Bacillus subtilis GN=adhA PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.679e-14
Identity = 55/188 (29.26%), Postives = 89/188 (47.34%), Query Frame = 2
Query:  149 LELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPE-------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            +E   L P+DVL+ +K  G+C SD+H              PMV GHE AGV+  VG++V  L  GDRV +   + SC +C+YC       C +       S      P +G  + ++V       ++PD + ++  +  +C  ++      +  N+GP   V I+G G +G + +  A A GA   V+
Sbjct:   24 IERRGLRPHDVLIDIKFSGICHSDIHSAFDEWGGGIF---PMVPGHEIAGVVTAVGTKVTKLAVGDRVGVGCFVDSCGECEYCLNAEEQFCTKGVVQTYNSVDYDGNPTYGGYSQKIVVTDRFVVRIPDRLEMDVASPLLCAGITT-YSPLKHWNVGPGKKVAIVGVGGLGHLAIQFAHAMGAEVTVL 207          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: DOIAD_STRFR (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces fradiae GN=neoA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 55/171 (32.16%), Postives = 79/171 (46.20%), Query Frame = 2
Query:  152 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFG 664
            ++P+  P + LVR+    VCGSD+ F K +         P+V GHE +G +  V       + G  V  +   SC  C +C  G   LC +   LG      C     V  A+L   LPD + L      EPL+V ++A  R  + P   V +MG+G IGL+ + A R  G
Sbjct:   18 DIPAPAPGEALVRVAYNSVCGSDLSFYKGVWHG---FTYPVVPGHEWSGSVVDVNGPRGADLVGRNVVGDLTCSCGTCAHCAAGTPTLCEDLGELGFTRDGACAEYMTVPVANLR-PLPDTLPLRTACQVEPLAVALNAVDRLGVTPGEKVAVMGAGGIGLLLVQAVRLRG 184          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1B_HUMAN (Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14
Identity = 58/208 (27.88%), Postives = 96/208 (46.15%), Query Frame = 2
Query:  140 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCL-----ANQVVHPADLCFKLPDNVSLEEGAM--CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            I+ +E+     Y+V ++M AVG+C +D H +      + V   P+++GHE AG++E VG  V T+ PGD+V       C +C  CK    N C ++  LG+P                P+H  L     +   V   +   K+     LE+  +  C   +    A   A + P +   + G G +GL  ++  +A GA RI+ VD++
Sbjct:   24 IEDVEVAPPKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKN-DLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDIN 226          
The following BLAST results are available for this feature:
BLAST of FC868714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
ADH_SCHPO1.983e-1531.82Alcohol dehydrogenase OS=Schizosaccharomyces pombe... [more]
ADH1B_UROHA1.983e-1528.99Alcohol dehydrogenase 1B OS=Uromastyx hardwickii P... [more]
ADH_THEBR3.382e-1531.18NADP-dependent alcohol dehydrogenase OS=Thermoanae... [more]
DOIAD_STRLV4.418e-1534.502-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH_CLOBE5.769e-1531.12NADP-dependent alcohol dehydrogenase OS=Clostridiu... [more]
ADH7_RAT5.769e-1527.98Alcohol dehydrogenase class 4 mu/sigma chain OS=Ra... [more]
ADH_SULAC7.535e-1530.15NAD-dependent alcohol dehydrogenase OS=Sulfolobus ... [more]
ADHA_BACSU1.679e-1429.26Probable formaldehyde dehydrogenase adhA OS=Bacill... [more]
DOIAD_STRFR2.192e-1432.162-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH1B_HUMAN2.192e-1427.88Alcohol dehydrogenase 1B OS=Homo sapiens GN=ADH1B ... [more]

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Properties
Property NameValue
Genbank descriptionC31003H04EF AbioticL1 Citrus clementina cDNA clone C31003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868714 ID=FC868714; Name=FC868714; organism=Citrus clementina; type=EST; length=712bp
AGTGAAGTCTCTGCTGCGCACTTGTGTTTTTGAAGAGTGAAAAGCAAATA
TGGGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTT
AACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTT
GGAGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCG
TTGGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCC
GATTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGT
CATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTG
TGGCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGA
GGTCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGT
TCATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTA
AGCTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTG
AGTGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAA
TGTGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGCAG
CTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTAT
CGTTTATCTGTT
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