FC868714

Overview
NameFC868714
Unique NameFC868714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1_ZYMMO (Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=adhA PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.088e-13
Identity = 54/204 (26.47%), Postives = 102/204 (50.00%), Query Frame = 2
Query:  107 AAWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNV--SLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVDDYRLS 709
            AA +   +T++++  +L  L   + L+ M+  GVC +D+H    ++  DF  +   + GHE  G++++VG  V +L  GDR ++      C  C+YC  G   LC   +  G   V G +A + +  AD   K+PD +  ++     C  ++    A + + I P   + I G G +G + +  A+     +++ +DV+D +L+
Sbjct:    3 AAVITKDHTIEVKDTKLRPLKYGEALLEMEYCGVCHTDLH----VKNGDFGDETGRITGHEGIGIVKQVGEGVTSLKVGDRASVAWFFKGCGHCEYCVSGNETLCRNVENAGY-TVDGAMAEECIVVADYSVKVPDGLDPAVASSITCAGVTT-YKAVKVSQIQPGQWLAIYGLGGLGNLALQYAKNVFNAKVIAIDVNDEQLA 200          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH5_YEAST (Alcohol dehydrogenase 5 OS=Saccharomyces cerevisiae GN=ADH5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLAD--FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVD 688
            L+ + + +P   P ++LV +K  GVC SD+H        D  F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C+YC+ G  + CP   G G     G         A     +P NV+L E A  +C  ++V   A +RAN+ P   V I G+ G +G + +  A A G  R++ +D
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWH----GDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFTH-DGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGACGGLGSLAIQYALAMGY-RVIGID 205          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH5_SACPS (Alcohol dehydrogenase 5 OS=Saccharomyces pastorianus GN=ADH5 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.421e-13
Identity = 63/191 (32.98%), Postives = 96/191 (50.26%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLAD--FVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVD 688
            L+ + + +P   P ++LV +K  GVC SD+H        D  F +K P++ GHE AGV+ K+GS VK    GD   ++    +C  C+YC+ G  + CP   G G     G         A     +P NV+L E A  +C  ++V   A +RAN+ P   V I G+ G +G + +  A A G  R++ +D
Sbjct:   22 LEYKDVTVPEPKPNEILVHVKYSGVCHSDLHAWH----GDWPFQLKFPLIGGHEGAGVVVKLGSNVKGWKVGDFAGIKWLNGTCMSCEYCEVGNESQCPYLDGTGFTH-DGTFQEYATADAVQAAHIPPNVNLAEVAPILCAGITV-YKALKRANVIPGQWVTISGACGGLGSLAIQYALAMGY-RVIGID 205          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1_RAT (Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Adh1 PE=1 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.856e-13
Identity = 54/212 (25.47%), Postives = 93/212 (43.87%), Query Frame = 2
Query:  140 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPL----------SVGV-HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            I+ +E+     ++V ++M A GVC SD H +            P V+GHE AG++E +G  V  + PGD+V       C +C  CK    NLC ++K L  P                P+H  ++          + + D++++ +     PL          S G   A + A + P +   + G G +GL  ++  +  GA +I+ VD++
Sbjct:   24 IEDIEVAPPKAHEVRIKMVATGVCRSDDHAVS----GSLFTPLPAVLGHEGAGIVESIGEGVTCVKPGDKVIPLFSPQCGKCRICKHPESNLCCQTKNLTQPKGALLDGTSRFSCRGKPIHHFISTSTFSQ----YTVVDDIAVAKIDAAAPLDKVCLIGCGFSTGYGSAVQVAKVTPGSTCAVFGLGGVGLSVVIGCKTAGAAKIIAVDIN 227          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 59/184 (32.07%), Postives = 87/184 (47.28%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVK--EPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI--SCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGV---HACRRANIGPETNVLIMGSGPIGLVTMLAARAFG 664
            L I+ + +P  GP  VL++ +A GVC +D+H  K     D+ V+   P + GHE  G + K+G+EV  L  GDRV + P +  +C  C  C+ G   LC   +  G   V G  A   +   D   +LP    LE G     L  GV      +   + P   VL+ G G +G + +  A+A G
Sbjct:   15 LVIEEVPVPQPGPGQVLIKYEATGVCHTDLHAAK----GDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGV-PWLHTACGCCTPCRTGWETLCGSQQNTGY-SVDGTFAQYGLADPDFVGRLP--ARLEFGPAAPVLCAGVTVYKGLKETEVRPGEWVLVSGIGGLGHMAVQYAKAMG 190          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.135e-13
Identity = 60/189 (31.75%), Postives = 91/189 (48.15%), Query Frame = 2
Query:  155 LPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVV--KEPMVIGHECAGVIEKVGSEVK--TLVPGDRVALE-PGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGS-GPIGLVTMLAARAFGAPRIVIVDVDD 697
            +P  GP ++LV+M+  GVC +D+H +K     D+ +  K P++ GHE AGV+   G  VK      GDR  ++    SC  C+ C      LCP +  L    V G      +  A L  K+PDNV L+  A  +C  ++V     + +   P   V I+G+ G +G +    A+A G   I I   D+
Sbjct:   26 VPKPGPDEILVKMRYSGVCHTDLHAMK----GDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCPHA-SLSGYTVDGTFQQYTIGKAALASKIPDNVPLDAAAPILCAGITV-YKGLKESGARPGQTVAIVGAGGGLGSLAQQYAKAMGLRTIAIDSGDE 208          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: DOIAD_MICEC (2-deoxy-scyllo-inosamine dehydrogenase OS=Micromonospora echinospora GN=gacH PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 52/178 (29.21%), Postives = 85/178 (47.75%), Query Frame = 2
Query:  158 PSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDV 691
            P   P   +V++    +CGSD+   +     +   + P+V GHE AGV++      ++ V G  V  +  + C  C  C+ G   +C     +G     GC A  V  P    + LP+ + L   +  EPL+V +HA  R N+ P   V ++G+G IG + + +ARA GA   +  D+
Sbjct:   24 PEAPPGWAVVKVHYCCLCGSDLWLYRGKWHGN---RYPIVPGHEWAGVVDSAPEGYESWV-GRPVTGDLIVGCQGCGPCRDGLPVMCENLIEIGFTVDGGC-AGYVAVPITNLYLLPEGMDLAAASQTEPLAVALHAVDRINLRPAERVAVLGAGGIGQLILQSARATGATVTLATDL 196          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH_MYCTU (Probable alcohol dehydrogenase adh OS=Mycobacterium tuberculosis GN=adh PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 63/200 (31.50%), Postives = 90/200 (45.00%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKT---LVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPPVH-------GCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETN----VLIMGSGPIGLVTMLAARAFGAPRIVI 682
            L ++   LP +G  D LVR++A G+CG+D H   T  LA      P   GHE  G I  +G   +    +  GDRVA+E   SC QC  C+GG Y  C     +   G  PV        G    Q + P  +  ++  ++S E   +  PL  G+   R     PET     V ++G G  GL    AA+  GA  +++
Sbjct:   18 LVVRQYRLPRIGDDDALVRVEACGLCGTD-HEQYTGELAGGFAFVP---GHETVGTIAAIGPRAEQRWGVSAGDRVAVEVFQSCRQCANCRGGEYRRCVRHGLADMYGFIPVDREPGLWGGYAEYQYLAPDSMVLRVAGDLSPEVATLFNPLGAGI---RWGVTIPETKPGDVVAVLGPGIRGLCAAAAAKGAGAGFVMV 210          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.053e-13
Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 2
Query:  110 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPP----VHGCLANQVVH------------PADLCF-KLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            AW  G   L I+ +E+     ++V +++ A GVC +D +   TL  +D     P+++GHE AG +E VG  V    PGD V       C +C +CK  + NLC +   ++G G  P       C   QV H             AD+   K+ +   +++  +   L  G+      A   A + P +   + G G +GL  ++  +  GA RI+ +D++
Sbjct:   15 AWEPG-KPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAY---TLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQGLLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCL---LGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLN 227          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: FADH1_SCHPO (Probable S-(hydroxymethyl)glutathione dehydrogenase 1 OS=Schizosaccharomyces pombe GN=SPBC1539.07c PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 58/209 (27.75%), Postives = 98/209 (46.89%), Query Frame = 2
Query:  134 LKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCP---ESKGLGSPP----VHGCLANQVVHPADLC----FKLPDNVSLEEGAMCEPL-SVGVHAC----------RRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            L I+ +++     ++V V++    VC +D +   TL   D     P+V+GHE AG++E +G  V  + PGD V L     C +C +C+ G+ NLC    E++G G  P       C    ++H         + +  ++SL   +   PL S+ +  C            A +   + V ++G G +GL  M  A A GA RI+ +D++
Sbjct:   22 LSIEDIQVAPPKAHEVRVKVDWSAVCHTDAY---TLSGVDPEGAFPIVLGHEGAGIVESIGEGVINVRPGDHVILLYTPECKECKFCRSGKTNLCSKIRETQGRGLMPDGTSRFSCRDKTLLHYMGCSSFSQYTVVADISLVAISHSAPLRSICLLGCGVTTGFGAVTHSAKVESGSTVAVVGCGCVGLAAMQGAVAAGASRIIAIDIN 227          
The following BLAST results are available for this feature:
BLAST of FC868714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
ADH1_ZYMMO1.088e-1326.47Alcohol dehydrogenase 1 OS=Zymomonas mobilis GN=ad... [more]
ADH5_YEAST1.421e-1332.98Alcohol dehydrogenase 5 OS=Saccharomyces cerevisia... [more]
ADH5_SACPS1.421e-1332.98Alcohol dehydrogenase 5 OS=Saccharomyces pastorian... [more]
ADH1_RAT1.856e-1325.47Alcohol dehydrogenase 1 OS=Rattus norvegicus GN=Ad... [more]
ADHA_RHIME4.135e-1332.07Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH3_EMENI4.135e-1331.75Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
DOIAD_MICEC7.053e-1329.212-deoxy-scyllo-inosamine dehydrogenase OS=Micromon... [more]
ADH_MYCTU7.053e-1331.50Probable alcohol dehydrogenase adh OS=Mycobacteriu... [more]
ADHX_SPAAU7.053e-1327.27Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
FADH1_SCHPO9.211e-1327.75Probable S-(hydroxymethyl)glutathione dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionC31003H04EF AbioticL1 Citrus clementina cDNA clone C31003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868714 ID=FC868714; Name=FC868714; organism=Citrus clementina; type=EST; length=712bp
AGTGAAGTCTCTGCTGCGCACTTGTGTTTTTGAAGAGTGAAAAGCAAATA
TGGGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTT
AACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTT
GGAGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCG
TTGGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCC
GATTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGT
CATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTG
TGGCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGA
GGTCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGT
TCATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTA
AGCTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTG
AGTGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAA
TGTGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGCAG
CTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTAT
CGTTTATCTGTT
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