FC868714

Overview
NameFC868714
Unique NameFC868714
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length712
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.211e-13
Identity = 57/183 (31.15%), Postives = 83/183 (45.36%), Query Frame = 2
Query:  161 SLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPE------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            S G  DV +++   G+C SD+H +K           P+V GHE AGV+ +VG  V     GDRV +   + SC  C+ C  G  N CPE      S        +G  ++ VV         P+ + L+ GA  +C  ++V           P  +V ++G G +G V +  ARAFG    VI
Sbjct:   37 STGDDDVAIKILFCGICHSDLHCIKNEWKHSIY---PLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLGHVAVKFARAFGLKVTVI 216          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: DOIAD_STRKN (2-deoxy-scyllo-inosamine dehydrogenase OS=Streptomyces kanamyceticus GN=kanE PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 56/180 (31.11%), Postives = 82/180 (45.56%), Query Frame = 2
Query:  152 ELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGS---EVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            ++P+  P + LV +    +CGSD   L   R        P+V GHE +G + ++       ++LV G  V  +   +C  C  C  G   LC   + LG      C A  +  P D    LPD +SL      EPL+V ++A   A + P   V +MG+G IGL+ M  AR  G    V+
Sbjct:   18 DVPTPRPGEALVHIAYNSICGSD---LSLYRGVWHGFGYPVVPGHEWSGTVVEINGANGHDQSLV-GKNVVGDLTCACGNCAACGRGTPVLCENLQELGFTKDGAC-AEYMTIPVDNLRPLPDALSLRSACQVEPLAVALNAVSIAGVAPGDRVAVMGAGGIGLMLMQVARHLGGEVTVV 192          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1_ENTHI (NADP-dependent alcohol dehydrogenase OS=Entamoeba histolytica GN=ADH1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 59/202 (29.21%), Postives = 90/202 (44.55%), Query Frame = 2
Query:  116 LMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKG----------GRYNLCPESKGLGSPPVHGCLANQVVHPADLCFK-LPDNVSLEEGAM-CEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIV 685
            ++G+  +     ++P  GP D LVR  A+  C SD H +    + D   +  M++GHE  G I KVGS VK L  GD+V +      W  +  +           G +       G+ S   H       V+ AD     LP ++  E+  M  + ++ G H    ANI     V ++G GP+GL+++  A   GA RI  V
Sbjct:    6 MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGD---RHDMILGHEAVGQIVKVGSLVKRLKVGDKVIVPAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSEVFH-------VNEADANLALLPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAV 197          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADH1S_HORSE (Alcohol dehydrogenase S chain OS=Equus caballus PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 1.203e-12
Identity = 57/212 (26.89%), Postives = 92/212 (43.40%), Query Frame = 2
Query:  140 IQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPESKGLGSP----------------PVHGCLANQVVHPADLCFKLPDNVSLEEGAMCEPLS----VGV-------HACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            I+ +E+     ++V ++M A G+C SD H +    +A      P++ GHE AG++E +G  V T+ PGD+V       C +C  CK    NLC   K L  P                P+H  L           + + D +S+ +     PL     VG         A + A +   +   + G G +GL  ++  +A GA RI+ VD++
Sbjct:   24 IEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL----PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQ----YTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDIN 225          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.571e-12
Identity = 62/220 (28.18%), Postives = 100/220 (45.45%), Query Frame = 2
Query:  110 AWLMGVNTLKIQPLELPSLGPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLCPE---SKGLGSPP----VHGCLANQVVH------------PADLCF-KLPDNVSLEEGAMCEPLSVGVH-----ACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            AW  G   L I+ +E+     ++V V++ A  VC +D +   TL  AD     P+++GHE AG++E VG  V    PGD V       C +C +C   + NLC +   ++G G  P       C   QV+H             AD+   K+  +  L++  +   L  GV      A   A + P +   + G G +GL  ++  +  GA RI+ +D++
Sbjct:   12 AWEAG-KPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAY---TLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVMPDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCL---LGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDLN 224          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: FRMA_ECOSM (S-(hydroxymethyl)glutathione dehydrogenase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=frmA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 59/195 (30.26%), Postives = 89/195 (45.64%), Query Frame = 2
Query:  176 DVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGISCWQCDYCKGGRYNLC-----PESKGL-----------GSPPVH--GCLANQ---VVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRR-ANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            +VL+++   GVC +D     TL   D     P+V+GHE AGV+ +VG  V ++ PGD V       C +C++C+ G+ NLC      + KGL           G P  H  GC       VV    L    P+        +   ++ G+ A    A + P+ +V + G G IGL  +  AR   A RI+ +D +
Sbjct:   29 EVLIKVTHTGVCHTDAF---TLSGDDPEGVFPVVLGHEGAGVVVEVGEGVTSVKPGDHVIPLYTAECGECEFCRSGKTNLCVAVRETQGKGLMPDGTTRFSYNGQPLYHYMGCSTFSEYTVVAEVSLAKINPEANHEHVCLLGCGVTTGIGAVHNTAKVQPDDSVAVFGLGAIGLAVVQGARQAKAGRIIAIDTN 220          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.680e-12
Identity = 52/181 (28.73%), Postives = 84/181 (46.41%), Query Frame = 2
Query:  167 GPYDVLVRMKAVGVCGSDVHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVAL-EPGISCWQCDYCKGGRYNLCPE------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            G  DV  ++   G+C +D+   K       +   P+V GHE  GV+ +VG++VK    GD+V +     SC  CD C  G  N CP+      +K       HG  ++ +V   D   ++PDN+ L+  A  +C  ++V           P  ++ ++G G +G V +  A+A G    VI
Sbjct:   32 GEKDVRFKVLFCGICHTDLSMAKN---EWGLTTYPLVPGHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVVGLGGLGHVAVKFAKAMGTKVTVI 209          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: CADH7_PICAB (Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 56/190 (29.47%), Postives = 87/190 (45.79%), Query Frame = 2
Query:  155 LPSLGPYDVLVRMKAVGVCGSD-VHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPE------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            L + GP DV+VR+   G+C SD V     + ++++    PMV GHE  GV+ ++GSEVK    G+ V +   + SC  C  C G     C +             P  G  A+ +V       ++P+N+ LE+ A  +C  ++V           P     I+G G +G + +  A+AFG    VI   D
Sbjct:   29 LRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNY----PMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSD 214          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: CADH2_PICAB (Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.500e-12
Identity = 56/190 (29.47%), Postives = 87/190 (45.79%), Query Frame = 2
Query:  155 LPSLGPYDVLVRMKAVGVCGSD-VHFLKTLRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCPE------SKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVIVDVD 694
            L + GP DV+VR+   G+C SD V     + ++++    PMV GHE  GV+ ++GSEVK    G+ V +   + SC  C  C G     C +             P  G  A+ +V       ++P+N+ LE+ A  +C  ++V           P     I+G G +G + +  A+AFG    VI   D
Sbjct:   29 LRNKGPEDVIVRVIYCGICHSDLVQMHNEMGMSNY----PMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWTYNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEPGKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSD 214          
BLAST of FC868714 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12
Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 2
Query:  161 SLGPYDVLVRMKAVGVCGSDVHFLKT-LRLADFVVKEPMVIGHECAGVIEKVGSEVKTLVPGDRVALEPGI-SCWQCDYCKGGRYNLCP------ESKGLGSPPVHGCLANQVVHPADLCFKLPDNVSLEEGA--MCEPLSVGVHACRRANIGPETNVLIMGSGPIGLVTMLAARAFGAPRIVI 682
            S G  DV++++   G+C SD+H +K   + A +    P+V GHE AGV+ + G  V     GD+V +   + SC  CD C  G  N CP       S        +G  ++ VV       + P+ + L++GA  +C  ++V           P  +V ++G G +G V +  A+AFG    VI
Sbjct:   27 STGDDDVVIKILYCGICHSDLHSIKNEWKNATY----PLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLGHVAVKFAKAFGMTVTVI 206          
The following BLAST results are available for this feature:
BLAST of FC868714 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
CADH3_ORYSJ9.211e-1331.15Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]
DOIAD_STRKN1.203e-1231.112-deoxy-scyllo-inosamine dehydrogenase OS=Streptom... [more]
ADH1_ENTHI1.203e-1229.21NADP-dependent alcohol dehydrogenase OS=Entamoeba ... [more]
ADH1S_HORSE1.203e-1226.89Alcohol dehydrogenase S chain OS=Equus caballus PE... [more]
ADHX_UROHA1.571e-1228.18Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
FRMA_ECOSM2.680e-1230.26S-(hydroxymethyl)glutathione dehydrogenase OS=Esch... [more]
CADH7_ARATH2.680e-1228.73Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH7_PICAB3.500e-1229.47Probable cinnamyl alcohol dehydrogenase 7/8 OS=Pic... [more]
CADH2_PICAB3.500e-1229.47Probable cinnamyl alcohol dehydrogenase 2 OS=Picea... [more]
CADH5_ORYSJ4.571e-1229.89Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionC31003H04EF AbioticL1 Citrus clementina cDNA clone C31003H04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868714 ID=FC868714; Name=FC868714; organism=Citrus clementina; type=EST; length=712bp
AGTGAAGTCTCTGCTGCGCACTTGTGTTTTTGAAGAGTGAAAAGCAAATA
TGGGCAAGGGAGGGATGTCACAAGGAGAAAAGGAAGATGGAGAAGAAGTT
AACATGGCAGCTTGGCTTATGGGTGTCAACACCCTCAAGATTCAGCCTTT
GGAGCTTCCTTCTCTGGGACCTTATGATGTTTTAGTCAGGATGAAAGCCG
TTGGTGTTTGTGGAAGTGATGTGCATTTTCTCAAGACCTTGAGGCTTGCC
GATTTTGTAGTGAAAGAGCCTATGGTGATTGGGCATGAGTGTGCTGGGGT
CATAGAGAAGGTGGGAAGCGAGGTGAAGACTTTGGTGCCCGGTGACCGTG
TGGCCCTGGAACCAGGGATCAGCTGCTGGCAATGTGATTACTGCAAAGGA
GGTCGATACAACTTGTGTCCAGAGTCGAAAGGTCTTGGAAGTCCGCCAGT
TCATGGTTGTCTGGCTAATCAGGTGGTGCATCCTGCAGACCTATGTTTTA
AGCTGCCCGACAATGTGAGCCTGGAGGAAGGGGCTATGTGTGAGCCCTTG
AGTGTTGGTGTTCATGCCTGCCGCCGTGCCAATATCGGTCCTGAGACAAA
TGTGCTTATCATGGGATCAGGGCCCATAGGACTTGTCACAATGCTAGCAG
CTCGTGCTTTTGGAGCTCCTAGAATTGTCATTGTGGATGTGGATGACTAT
CGTTTATCTGTT
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